CI01000004_14808034_14808645


Basic Information

Item Value
gene id CI01000004_14808034_14808645
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 14807938 ~ 14808969 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_14808034_14808645.mRNA
AGTTGCAATTCATAGGGGTGAGTTCAGATATAGAGAACTTAGTTCATCTGGTGCAAGTCATGTTTCAGTGATAAACAGAAAGTTATTTGACCTGAAAAGTCATTCAACAGAAAAGTTTTGTTTGTTACAGATCTCACATTTATCAAAGCCATTTTAATTGGCACCATAATTTCACATAATGACATAATCTTCCCATATAGCGCTGTTAATATTATTGGCTCATTAATCATTCATATTTTTTCTTAGGCAAAATCATCTGCTAAATAAATAAATAAATAAGTGTATCTGTCATTTCTTGCAGTTGCAAAAGTTGTCCTCTAGGCAATGGCAGAGCAAAATCATGAGAAGTGGAGCATCGCATTGAAAGCAGGAAGTTCCAGCGTGTTTATGTGTGAAACTGCAGAGACTCACAGTAACACAGAGCTACAGCTCAGAGCACGGAGAACATTAATACACAATTCATATGACCGAGTAAACATGGAAAAACACCTGTTTCTGATTTTATTTCTGACTTCAGGTGTGATGACTGCAGACAAGATTGGGCCAAATGAAGAAACTGTTATAAAGAAGGAAGACGAGACTGTGACCCTCAGCTGCTCATATGAAACAGACAGCAGTAATGTTAGACTTTACTGGTACAGACAGTATCTTAATGGAGAGCCTCAGTATTTAATATGGAAAAATGCTCGTTCATATAGTAATACTGGAAGCCCCTCTGATCCTCGCTTTCAGTCGACTACATCACGTACAACCACTGAACTCATTATTAACAGTGTGACTCTGTCAGATTCAGCTCTCTATTATTGTGCTCTATTAGTTGGAGCCCAGTGATACAAAGTCTATGTGAAGCTGTACAAAAACTCAAATTCATTTTTCACTTTGATCTCAAGCCACATCAAACCCACAATCTATAATTCACATAATATA
>TU39186
GAGAACATTAATACACAATTCATATGACCGAGTAAACATGGAAAAACACCTGTTTCTGATTTTATTTCTGACTTCAGGTGTGATGACTGCAGACAAGATTGGGCCAAATGAAGAAACTGTTATAAAGAAGGAAGACGAGACTGTGACCCTCAGCTGCTCATATGAAACAGACAGCAGTAATGTTAGACTTTACTGGTACAGACAGTATCTTAATGGAGAGCCTCAGTATTTAATATGGAAAAATGCTCGTTCATATAGTAATACTGGAAGCCCCTCTGATCCTCGCTTTCAGTCGACTACATCACGTACAACCACTGAACTCATTATTAACAGTGTGACTCTGTCAGATTCAGCTCTCTATTATTGTGCTCTA

Function

NR:

description
T cell receptor V alpha chain, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_14808034_14808645.mRNA False 927 mRNA 0.37 2 14807938 14808969
TU39186 True 373 TUCP 0.39 2 14808052 14808529

Neighbor

gene id symbol gene type direction distance location
CI01000004_14802126_14805324 NA coding downstream 2200 14801301 ~ 14805738 (-)
CI01000004_14794085_14794548 NA coding downstream 13345 14794032 ~ 14794593 (-)
CI01000004_14775109_14792782 NA coding downstream 15154 14774282 ~ 14792784 (-)
CI01000004_14770317_14773615 NA coding downstream 33938 14770286 ~ 14774000 (-)
CI01000004_14758580_14768474 NA coding downstream 39258 14758528 ~ 14768680 (-)
CI01000004_14809409_14811408 NA coding upstream 254 14809223 ~ 14811709 (-)
CI01000004_14815294_14818132 NA coding upstream 6173 14815142 ~ 14821516 (-)
CI01000004_14827536_14831360 NA coding upstream 18527 14827496 ~ 14831526 (-)
CI01000004_14832429_14839825 NA coding upstream 23182 14832151 ~ 14840019 (-)
CI01000004_14843132_14843640 NA coding upstream 33944 14842913 ~ 14843979 (-)
G34478 NA non-coding downstream 1432 14806001 ~ 14806506 (-)
CI01000004_14756092_14758171 NA non-coding downstream 49708 14755814 ~ 14758237 (-)
G34474 NA non-coding upstream 28720 14837689 ~ 14838322 (-)
G34468 NA non-coding upstream 76856 14885825 ~ 14888056 (-)
G34470 NA non-coding upstream 80723 14889692 ~ 14893295 (-)
G34550 NA non-coding upstream 101112 14910081 ~ 14912736 (-)
CI01000004_14749034_14751685 NA other downstream 56219 14748304 ~ 14753596 (-)
CI01000004_14742838_14744316 NA other downstream 63602 14742807 ~ 14744507 (-)
G34632 NA other upstream 202392 15011361 ~ 15025221 (-)
G34668 NA other upstream 242207 15051176 ~ 15052775 (-)
CI01000004_15086759_15087492 NA other upstream 277702 15086671 ~ 15087575 (-)
G34718 NA other upstream 472047 15281016 ~ 15281649 (-)

Expression


Co-expression Network