LOC122345923


Basic Information

Item Value
gene id LOC122345923
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 24754202 ~ 24758668 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU58223
CCCCGACGAGCGCCGCGCGCAGGCCAGTTTCCGTATGTCACGTTACTTCTATATCTCTTAATTACAATAACAGCCCGAGCTTCTGAAGTTGTCCTACATTTAGGTCAGAGTGAAGTAAAGAGAATGGAGGACAGAAATTTGTTGCAGAACATTCGTAAACCGCCCAAACTCAGCACACCGGCTTTAAGTACTCAGTTACTCTGTTGTTCTGTATGAGTGTATAATACGTTGATGTGggatttattcaattattacaaaatgacaataataaattGTCTCTTTCGCAGTAATCTCCAAACTGATTGTGACGGTCCTGCCCATCGCACAGGTATCAATCGGCGCAATATACGTGAATGACTGTCCAAAGCAGCCGTACATCCCCATCTATCTGCTCGTGTCAGGTGTGTTTGCGCTAGTGCTGGGCCTGTTGTCCTGCCTGCCATGCACCCAGGAGCCAGAAGACGGCACGCAGACTCCTCTCAGCGGCCTCTGCACCGCCTGGAACTCACTGGTGTCACTCTTTCTCTTCTGCTGGTTTATCGCTGgtAATGTTTGGATCTACTCCATTTACCAGCCTAATTACAACCCTGGGATCGACTACTGCAATAAGATTTTGTACCTCTTTGCTTTCTGGACCACcacatttgtgtatatattgcTGGGCATCGCCTTCCTGGGGGGATGCTGTATGTTAttctgcatgtgtttgtgtggaagACATGGAAATGTGGAAGATGTGTGATCGAAAGGCCAGCACTCGCTGATATTACTAATTATTACACTGTTGCGCACTTTCGCAGTTTCAGGCTTGCTTATTATTCATTTTGCCCTTATGTGAGATAATGCCACTTGCTAGGTCGTTTAGGAGCTTTTGCGTTATTGATGGGCGGAGTTACACTGTTACGTGCTTTCTCTGTAAGTTCCTGTGTCTAAATGTATCTGTATTGTCCATCAGCAAAGTCTTCTGAAGATGTcagtttattaatttctttataatgGCATGTGTTAGATTTTGCCTTTGAGAATGTTGTGTAATGTGAGGGGGGGGAGGGATGAATAAATGGATGTATCAGTCATTCTTGAGACACGGGACAAAACATGCCCAGCAAATGTAACTgataggtttaaaaaaaaaaaaaaaaaaaaaaaaaaaacatcagatgcAAATGttatggtaaaaaataaaagaatgtttCAAACATAATTATccataattacataaatattatgtaaagtCTATGCCTTTTCATTACATCTAAAACAGTGTCTCCACAGACAAGATTCAATCATTTATATGCTGTAAAATGGataagaatatttatatatatgtattatgttgaaaaataccttgttttatgaaaagcaacacaaaataatatcCCGTATCACAGTTGAATTTTTTAGTGACGCTTGTTTCATAAGGTTTCGGTGTTTTATAGTTCATTCAGAATCATTTAAATCTTAGTGGTAATATTTTCtgtcacaaacacaaacactctcttcctatttctaattaaattatttgaaatatttagatcattttacTCTCTTGAAGCAGGTTCCCGGGTTCACACTGTTTGTTGTGTGtcttttaatacagtaattcaaGGATATAATTGAGAGGTAAAATGACTACAATTTCAGGTTTTCATCATAACCTTCAGATGTCTCGACTCCATCAGTTCTGTCACCTCTCGACAATTGAATATTTTGGTATACAATGCGTTAAGTATGACAGCATtgtaaataaagaatatatatagaG
>XM_043240457.1
TAACGTGTCTATGCTTGTCAAGTAAACGCAAACGATCCCTCCCCCGACGAGCGCCGCGCGCAGGCCAGTTTCCGTATGTCACGTTACTTCTATATCTCTTAATTACAATAACAGCCCGAGCTTCTGAAGTTGTCCTACATTTAGGTCAGAGTGAAGTAAAGAGAATGGAGGACAGAAATTTGTTGCAGAACATTCGTAAACCGCCCAAACTCAGCACACCGGCTTTAATAATCTCCAAACTGATTGTGACGGTCCTGCCCATCGCACAGGTATCAATCGGCGCAATATACGTGAATGACTGTCCAAAGCAGCCGTACATCCCCATCTATCTGCTCGTGTCAGGTGTGTTTGCGCTAGTGCTGGGCCTGTTGTCCTGCCTGCCATGCACCCAGGAGCCAGAAGACGGCACGCAGACTCCTCTCAGCGGCCTCTGCACCGCCTGGAACTCACTGGTGTCACTCTTTCTCTTCTGCTGGTTTATCGCTGgtAATGTTTGGATCTACTCCATTTACCAGCCTAATTACAACCCTGGGATCGACTACTGCAATAAGATTTTGTACCTCTTTGCTTTCTGGACCACcacatttgtgtatatattgcTGGGCATCGCCTTCCTGGGGGGATGCTGTATGTTAttctgcatgtgtttgtgtggaagACATGGAAATGTGGAAGATGTGTGATCGAAAGGCCAGCACTCGCTGATATTACTAATTATTACACTGTTGCGCACTTTCGCAGTTTCAGGCTTGCTTATTATTCATTTTGCCCTTATGTGAGATAATGCCACTTGCTAGGTCGTTTAGGAGCTTTTGCGTTATTGATGGGCGGAGTTACACTGTTACGTGCTTTCTCTGTAAGTTCCTGTGTCTAAATGTATCTGTATTGTCCATCAGCAAAGTCTTCTGAAGATGTcagtttattaatttctttataatgGCATGTGTTAGATTTTGCCTTTGAGAATGTTGTGTAATGTGAGGGGGGGGAGGGATGAATAAATGGATGTATCAGTCATTCTTGAGACACGGGACAAAACATGCCCAGCAAATGTAACTgataggtttaaaaaaaaaaaaaaaaaaaaaaaaaaaacatcagatgcAAATGttatggtaaaaaataaaagaatgtttCAAACATAATTATccataattacataaatattatgtaaagtCTATGCCTTTTCATTACATCTAAAACAGTGTCTCCACAGACAAGATTCAATCATTTATATGCTGTAAAATGGataagaatatttatatatatgtattatgttgaaaaataccttgttttatgaaaagcaacacaaaataatatcCCGTATCACAGTTGAATTTTTTAGTGACGCTTGTTTCATAAGGTTTCGGTGTTTTATAGTTCATTCAGAATCATTTAAATCTTAGTGGTAATATTTTCtgtcacaaacacaaacactctcttcctatttctaattaaattatttgaaatatttagatcattttacTCTCTTGAAGCAGGTTCCCGGGTTCACACTGTTTGTTGTGTGtcttttaatacagtaattcaaGGATATAATTGAGAGGTAAAATGACTACAATTTCAGGTTTTCATCATAACCTTCAGATGTCTCGACTCCATCAGTTCTGTCACCTCTCGACAATTGAATATTTTGGTATACAATGCGTTAAGTATGACAGCATtgtaaataaagaatatatatagaGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU58223 True 1765 lncRNA 0.38 4 24754204 24758627
XM_043240457.1 False 1708 mRNA 0.39 5 24754202 24758668

Neighbor

gene id symbol gene type direction distance location
sat2b sat2,sat2b,LOC107596022 coding downstream 2920 24749282 ~ 24751282 (-)
LOC122345804 LOC107730346,LOC107595984,LOC107684368 coding downstream 30293 24714443 ~ 24723909 (-)
rangrf rangrf coding downstream 64012 24685346 ~ 24690190 (-)
bspry bspry,LOC107746480,LOC107575043,LOC107730316,LOC107684387,LOC107596025 coding downstream 92602 24656827 ~ 24661600 (-)
traf2b traf2,LOC107697985,LOC107746475,LOC107567702 coding downstream 101661 24633302 ~ 24652541 (-)
taf6 taf6,LOC103372846 coding upstream 810 24759478 ~ 24782648 (-)
LOC122346005 LOC107727699,LOC107595976,LOC107660332 coding upstream 55941 24814609 ~ 24903289 (-)
zfpl1 zfpl1 coding upstream 472567 25231235 ~ 25263128 (-)
LOC122345796 pak3,LOC107566210,LOC107712492,LOC103475835,LOC103141826,LOC108245238,LOC107093501 coding upstream 544807 25303475 ~ 25446662 (-)
LOC122345798 dcx coding upstream 711984 25470652 ~ 25523837 (-)
G39347 NA non-coding downstream 880 24753082 ~ 24753322 (-)
G39341 NA non-coding downstream 22127 24731639 ~ 24732075 (-)
G39337 NA non-coding downstream 23811 24730212 ~ 24730391 (-)
LOC122345299 NA non-coding downstream 129324 24623559 ~ 24624878 (-)
G39298 LOC107683704,LOC107738921,LOC107600589,LOC107595993,LOC107730350 non-coding downstream 232181 24521562 ~ 24522021 (-)
G39356 NA non-coding upstream 82077 24840745 ~ 24846363 (-)
G39357 NA non-coding upstream 103275 24861943 ~ 24863191 (-)
G39365 NA non-coding upstream 153978 24912646 ~ 24912939 (-)
trnan-guu_1 NA non-coding upstream 159152 24917820 ~ 24917893 (-)
trnak-cuu_4 NA non-coding upstream 159337 24918005 ~ 24918076 (-)
naa38 naa38 other downstream 5592 24746672 ~ 24748610 (-)
anapc2 anapc2,LOC107559737,LOC107730340,LOC107746468,LOC107683706,LOC107595991,LOC107684355 other downstream 160086 24587724 ~ 24594116 (-)
tmc2a tmc2a,tmc1,LOC107684381,LOC107596032,LOC108437175,LOC107730318,LOC108259782 other downstream 476898 24265464 ~ 24277304 (-)
G39113 NA other downstream 553706 24197705 ~ 24200496 (-)
aatf LOC107695156,LOC107730321,LOC107600606,LOC107603183 other downstream 756463 23979664 ~ 23997739 (-)
G39413 LOC102215562 other upstream 523218 25281886 ~ 25282286 (-)
LOC122344921 NA other upstream 803306 25561974 ~ 25568686 (-)
LOC122345426 smpx,LOC107705278,LOC107671350,LOC107590224,LOC107663668,LOC107586736,LOC107721880 other upstream 2341147 27099815 ~ 27107385 (-)
isca1 isca1,LOC107702919,LOC107662049 other upstream 2624253 27382921 ~ 27398741 (-)
LOC122344874 NA other upstream 3127373 27886041 ~ 27895454 (-)

Expression


Co-expression Network