naa38 (naa38)


Basic Information

Item Value
gene id naa38
gene name naa38
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 24746672 ~ 24748610 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU58240
GCTTCTTTGAGTAACGTCGCGTTTCCGTTCGACGTTTACATGAATGTACAGGCTTTCACGTAACGAAGGCTCAAATGGCAACAGAAAATGAAGAGAACGGCACGGAAATGCAAACCGAGGTCTGAATACTGCTAGGAAGCGCTGTGGTGGACACGTCCTCTTATTCGCTAGCTCGCTGTAAGCTGGAGAACCTCCTGAATAAGAGCATGAGGATCCGGATGACCGACGGGAGAACACTGGTGGGGCTCTTCCTGTGCACTGACAGGGACTGCAACGTCATCCTGGGGTCCGCACAGGAGTTCCTCAAATCTACAGATTCTTTCTCACAAGGTGAGCCCAGAGTGCTGGGGCTGGCGATGATCCCTGGTCATCATGTTGTTTCTATAGAAGTTGAATCTGAAAGCCTTCAGACCACTACCCATGGACTTTGACAACTTTAGAGACTTCTGGATCACCATATGGACTACAGAGAATGTAGtttacatgaacacacacacacacacacaaatatagagATGGTAATGAAGATCCATTAGAGCTGGAGTTATTTACCCAAATGGTATTTTCCTCATTTGTAATTCCATACACAGTGGATTATTGTTCAAAGAAGAATAACAACATGACtgtgcattttttgtttgtttgtttgtaaacacattttgtaaatattgttctttttcaGTAAGAGATGTTTGTCTCCTCTTTGCTCCACTAGTTGTCCCTCTTAACCTCGATGCTGAAGTTGAGTAAACTGGGGTGCTAAATACATTCATATGTTTCGGtatagtacatttatttaaataggcAAATGACCcttataaaaaagaataaaacaaccTAAGATGtttcattttctattcatctttatttattacaacaTGAAGATATTAACTAATCTAAAGAAGGTACAATCTAAATAAACGGTTTAACATAACGGTCAAGTTCATGGAAATTgaaaagatataaaataaatttttagtAGTGGGGTGGGAGTCTTGATTTGATTCCAAAGTGGTTTCTGatcaagggtttttttttatacatgtacTGACCATTAATATCAaatttctgtgcatttttagatttgttaTATTAGTCACATGAGCAGTTTAGTTGTTTGGTTGCTGATGACATCACAGACAGAGGCGGGTCTAACAGCATTCACACGTTATAATGAATCAGATGTTTTGTCCTGTCAATAACTGACTA
>XM_043240471.1
TTAAGAACCCGAGCCGCCTGAAACGAAGAAGAACGCTTCTTTGAGTAACGTCGCGTTTCCGTTCGACGTTTACATGAATGTACAGGCTTTCACGTAACGAAGGCTCAAATGGCAACAGAAAATGAAGAGAACGGCACGGAAATGCAAACCGAGGTGGACACGTCCTCTTATTCGCTAGCTCGCTGTAAGCTGGAGAACCTCCTGAATAAGAGCATGAGGATCCGGATGACCGACGGGAGAACACTGGTGGGGCTCTTCCTGTGCACTGACAGGGACTGCAACGTCATCCTGGGGTCCGCACAGGAGTTCCTCAAATCTACAGATTCTTTCTCACAAGGTGAGCCCAGAGTGCTGGGGCTGGCGATGATCCCTGGTCATCATGTTGTTTCTATAGAAGTTGAATCTGAAAGCCTTCAGACCACTACCCATGGACTTTGACAACTTTAGAGACTTCTGGATCACCATATGGACTACAGAGAATGTAGtttacatgaacacacacacacacacacaaatatagagATGGTAATGAAGATCCATTAGAGCTGGAGTTATTTACCCAAATGGTATTTTCCTCATTTGTAATTCCATACACAGTGGATTATTGTTCAAAGAAGAATAACAACATGACtgtgcattttttgtttgtttgtttgtaaacacattttgtaaatattgttctttttcaGTAAGAGATGTTTGTCTCCTCTTTGCTCCACTAGTTGTCCCTCTTAACCTCGATGCTGAAGTTGAGTAAACTGGGGTGCTAAATACATTCATATGTTTCGGtatagtacatttatttaaataggcAAATGACCcttataaaaaagaataaaacaaccTAAGATGtttca

Function

symbol description
naa38 Predicted to be involved in negative regulation of apoptotic process. Predicted to be located in cytoplasm and nucleus. Predicted to be part of NatC complex. Orthologous to human NAA38 (N-alpha-acetyltransferase 38, NatC auxiliary subunit).

NR:

description
PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU58240 True 1209 lncRNA 0.39 3 24746672 24748576
XM_043240471.1 False 857 mRNA 0.42 3 24747031 24748610

Neighbor

gene id symbol gene type direction distance location
LOC122345804 LOC107730346,LOC107595984,LOC107684368 coding downstream 22763 24714443 ~ 24723909 (-)
rangrf rangrf coding downstream 56482 24685346 ~ 24690190 (-)
bspry bspry,LOC107746480,LOC107575043,LOC107730316,LOC107684387,LOC107596025 coding downstream 85072 24656827 ~ 24661600 (-)
traf2b traf2,LOC107697985,LOC107746475,LOC107567702 coding downstream 94131 24633302 ~ 24652541 (-)
tmem203 tmem203,LOC107559731,LOC107697982,LOC107684383,LOC107730349,LOC107580151 coding downstream 129756 24615358 ~ 24616916 (-)
sat2b sat2,sat2b,LOC107596022 coding upstream 672 24749282 ~ 24751282 (-)
taf6 taf6,LOC103372846 coding upstream 10868 24759478 ~ 24782648 (-)
LOC122346005 LOC107727699,LOC107595976,LOC107660332 coding upstream 65999 24814609 ~ 24903289 (-)
zfpl1 zfpl1 coding upstream 482625 25231235 ~ 25263128 (-)
LOC122345796 pak3,LOC107566210,LOC107712492,LOC103475835,LOC103141826,LOC108245238,LOC107093501 coding upstream 554865 25303475 ~ 25446662 (-)
G39341 NA non-coding downstream 14597 24731639 ~ 24732075 (-)
G39337 NA non-coding downstream 16281 24730212 ~ 24730391 (-)
LOC122345299 NA non-coding downstream 121794 24623559 ~ 24624878 (-)
G39298 LOC107683704,LOC107738921,LOC107600589,LOC107595993,LOC107730350 non-coding downstream 224651 24521562 ~ 24522021 (-)
G39296 NA non-coding downstream 226285 24519667 ~ 24520387 (-)
G39347 NA non-coding upstream 4472 24753082 ~ 24753322 (-)
G39356 NA non-coding upstream 92135 24840745 ~ 24846363 (-)
G39357 NA non-coding upstream 113333 24861943 ~ 24863191 (-)
G39365 NA non-coding upstream 164036 24912646 ~ 24912939 (-)
trnan-guu_1 NA non-coding upstream 169210 24917820 ~ 24917893 (-)
anapc2 anapc2,LOC107559737,LOC107730340,LOC107746468,LOC107683706,LOC107595991,LOC107684355 other downstream 152556 24587724 ~ 24594116 (-)
tmc2a tmc2a,tmc1,LOC107684381,LOC107596032,LOC108437175,LOC107730318,LOC108259782 other downstream 469368 24265464 ~ 24277304 (-)
G39113 NA other downstream 546176 24197705 ~ 24200496 (-)
aatf LOC107695156,LOC107730321,LOC107600606,LOC107603183 other downstream 748933 23979664 ~ 23997739 (-)
G38973 NA other downstream 858992 23887303 ~ 23887680 (-)
LOC122345923 NA other upstream 5592 24754202 ~ 24758668 (-)
G39413 LOC102215562 other upstream 533276 25281886 ~ 25282286 (-)
LOC122344921 NA other upstream 813364 25561974 ~ 25568686 (-)
LOC122345426 smpx,LOC107705278,LOC107671350,LOC107590224,LOC107663668,LOC107586736,LOC107721880 other upstream 2351205 27099815 ~ 27107385 (-)
isca1 isca1,LOC107702919,LOC107662049 other upstream 2634311 27382921 ~ 27398741 (-)

Expression


Co-expression Network