G39375


Basic Information

Item Value
gene id G39375
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 25016561 ~ 25016841 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU58288
CCAAATCAATGCCTAATGATGTCACAGCGTCAGCTGTCTGACTTTATATCATTGAACAACAACACCTAGCTAGTCCATCAGAAAAGACTCAATGGTTAAACAAAGGAGCCATTAAGGCACATGATGGTTTGTGGACGTCATCGGATGGTCGTCCTGTGTTATCCTCATCATtagctgtttctgttttgacCCAAATTCATAGTCCATCCCACTGTGGagacaaaaaaatgtcttgtgcaTTGTAATCCTGGTGGCAGCCTTTCATGCCACATTTGATCTCA

Function

GO: NA

KEGG:

id description
ko04062 Chemokine signaling pathway

RNA

RNA id representative length rna type GC content exon number start site end site
TU58288 True 281 lncRNA 0.42 1 25016561 25016841

Neighbor

gene id symbol gene type direction distance location
LOC122346005 LOC107727699,LOC107595976,LOC107660332 coding downstream 113272 24814609 ~ 24903289 (-)
taf6 taf6,LOC103372846 coding downstream 233913 24759478 ~ 24782648 (-)
sat2b sat2,sat2b,LOC107596022 coding downstream 265279 24749282 ~ 24751282 (-)
LOC122345804 LOC107730346,LOC107595984,LOC107684368 coding downstream 292652 24714443 ~ 24723909 (-)
rangrf rangrf coding downstream 326371 24685346 ~ 24690190 (-)
zfpl1 zfpl1 coding upstream 214394 25231235 ~ 25263128 (-)
LOC122345796 pak3,LOC107566210,LOC107712492,LOC103475835,LOC103141826,LOC108245238,LOC107093501 coding upstream 286634 25303475 ~ 25446662 (-)
LOC122345798 dcx coding upstream 453811 25470652 ~ 25523837 (-)
hip1rb hip1r,hip1rb,LOC107571022 coding upstream 601270 25618111 ~ 25651008 (-)
kntc1 kntc1 coding upstream 638666 25655507 ~ 25708679 (-)
trnag-gcc_23 NA non-coding downstream 21329 24995162 ~ 24995232 (-)
trnag-gcc_22 NA non-coding downstream 24466 24992025 ~ 24992095 (-)
trnak-cuu_7 NA non-coding downstream 83583 24932906 ~ 24932978 (-)
trnak-cuu_6 NA non-coding downstream 89510 24926980 ~ 24927051 (-)
G39366 NA non-coding downstream 91614 24924707 ~ 24924947 (-)
G39377 NA non-coding upstream 2408 25019249 ~ 25019491 (-)
G39384 NA non-coding upstream 34340 25051181 ~ 25051518 (-)
G39401 NA non-coding upstream 158467 25175308 ~ 25176349 (-)
G39456 NA non-coding upstream 281035 25297876 ~ 25299229 (-)
G39458 NA non-coding upstream 282682 25299523 ~ 25299916 (-)
LOC122345923 NA other downstream 257893 24754202 ~ 24758668 (-)
naa38 naa38 other downstream 267951 24746672 ~ 24748610 (-)
anapc2 anapc2,LOC107559737,LOC107730340,LOC107746468,LOC107683706,LOC107595991,LOC107684355 other downstream 422445 24587724 ~ 24594116 (-)
tmc2a tmc2a,tmc1,LOC107684381,LOC107596032,LOC108437175,LOC107730318,LOC108259782 other downstream 739257 24265464 ~ 24277304 (-)
G39113 NA other downstream 816065 24197705 ~ 24200496 (-)
G39413 LOC102215562 other upstream 265045 25281886 ~ 25282286 (-)
LOC122344921 NA other upstream 545133 25561974 ~ 25568686 (-)
LOC122345426 smpx,LOC107705278,LOC107671350,LOC107590224,LOC107663668,LOC107586736,LOC107721880 other upstream 2082974 27099815 ~ 27107385 (-)
isca1 isca1,LOC107702919,LOC107662049 other upstream 2366080 27382921 ~ 27398741 (-)
LOC122344874 NA other upstream 2869200 27886041 ~ 27895454 (-)

Expression


Co-expression Network