G39401


Basic Information

Item Value
gene id G39401
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 25175308 ~ 25176349 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU58318
TCTGAAATCCTTGACCACCACAAAATCACCAGGTCTGATGTCATGCAGAAATCCTTCTGCTGGTTTAGGTAGAGCGTCCTTGACCTgttgagagatctgagagagagtcgaagacagatttttacaatagttcaacatgtcatcttcacacagagcagTAGAGGGCAATGGTCGGGGTTCCGGTCCCACTCCAAGCGATGGAGGCCTgccaaacaagatttcaaatgggctgagattagactttgctctttttctcattctcatatacatcaacacaatgggaagtgctttgacccaagacagacctgtttgctcacaacactttgccagtttatttttcaaaattccattttctctttcaacacTACCCCCGGACGCTGGATGATAGGAGGTATGTTTACGTATGTCAATTCCCAAGAATTTCCCAACCTGATCGATTGCCTCATTAGCAAAAGGTGTGCCATTATCACTACTAATCTTTTTTGGTATTCCCCATCTTGGGACGATCTCAGACACTAGTGCCTTTGCAACAGCCCCAGCATTTTGCTTAGATGTGGGGAAGACTTCCACCcattttgagaacatatcaaccaaaacaaggcagaatttcttaccttcacatggtgtcagttcaatgaaatcgaacattatgtgatcaaaaggttgacttggtggtggatgtgctgccaaagggacctgttgtcctcttcctacattatttgtggcacagatcatacaagattgacaatatttgtctgcaaaggaagtaaatccttttgtaaaccaatattgattgatcatgtcaaacattcccattttgcttatgtgatctaacccgtgcactaatttggcatagtgtgggaaaagtgttttggcaaacaagGTTTGTCTTCGGTGCTCAGCCAAACGTTGTCTTTCAGCTTGCACTCGGCCTTCAcccattgttttttctcttctggtgttGCGAAACCCTGCATAGCTGCAAGAGAACTAGAAGGGAAGGTTAGTTCGTCAtcgttaacagttacacatgtaaGAGAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU58318 True 1042 lncRNA 0.43 1 25175308 25176349

Neighbor

gene id symbol gene type direction distance location
LOC122346005 LOC107727699,LOC107595976,LOC107660332 coding downstream 272019 24814609 ~ 24903289 (-)
taf6 taf6,LOC103372846 coding downstream 392660 24759478 ~ 24782648 (-)
sat2b sat2,sat2b,LOC107596022 coding downstream 424026 24749282 ~ 24751282 (-)
LOC122345804 LOC107730346,LOC107595984,LOC107684368 coding downstream 451399 24714443 ~ 24723909 (-)
rangrf rangrf coding downstream 485118 24685346 ~ 24690190 (-)
zfpl1 zfpl1 coding upstream 54886 25231235 ~ 25263128 (-)
LOC122345796 pak3,LOC107566210,LOC107712492,LOC103475835,LOC103141826,LOC108245238,LOC107093501 coding upstream 127126 25303475 ~ 25446662 (-)
LOC122345798 dcx coding upstream 294303 25470652 ~ 25523837 (-)
hip1rb hip1r,hip1rb,LOC107571022 coding upstream 441762 25618111 ~ 25651008 (-)
kntc1 kntc1 coding upstream 479158 25655507 ~ 25708679 (-)
G39384 NA non-coding downstream 123790 25051181 ~ 25051518 (-)
G39377 NA non-coding downstream 155817 25019249 ~ 25019491 (-)
G39375 NA non-coding downstream 158467 25016561 ~ 25016841 (-)
trnag-gcc_23 NA non-coding downstream 180076 24995162 ~ 24995232 (-)
trnag-gcc_22 NA non-coding downstream 183213 24992025 ~ 24992095 (-)
G39456 NA non-coding upstream 121527 25297876 ~ 25299229 (-)
G39458 NA non-coding upstream 123174 25299523 ~ 25299916 (-)
G39470 NA non-coding upstream 277163 25453512 ~ 25453834 (-)
G39490 NA non-coding upstream 352534 25528883 ~ 25529111 (-)
G39503 NA non-coding upstream 380947 25557296 ~ 25557522 (-)
LOC122345923 NA other downstream 416640 24754202 ~ 24758668 (-)
naa38 naa38 other downstream 426698 24746672 ~ 24748610 (-)
anapc2 anapc2,LOC107559737,LOC107730340,LOC107746468,LOC107683706,LOC107595991,LOC107684355 other downstream 581192 24587724 ~ 24594116 (-)
tmc2a tmc2a,tmc1,LOC107684381,LOC107596032,LOC108437175,LOC107730318,LOC108259782 other downstream 898004 24265464 ~ 24277304 (-)
G39113 NA other downstream 974812 24197705 ~ 24200496 (-)
G39413 LOC102215562 other upstream 105537 25281886 ~ 25282286 (-)
LOC122344921 NA other upstream 385625 25561974 ~ 25568686 (-)
LOC122345426 smpx,LOC107705278,LOC107671350,LOC107590224,LOC107663668,LOC107586736,LOC107721880 other upstream 1923466 27099815 ~ 27107385 (-)
isca1 isca1,LOC107702919,LOC107662049 other upstream 2206572 27382921 ~ 27398741 (-)
LOC122344874 NA other upstream 2709692 27886041 ~ 27895454 (-)

Expression


Co-expression Network