G39413 (LOC102215562)


Basic Information

Item Value
gene id G39413
gene name LOC102215562
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 25281886 ~ 25282286 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU58333
caaccttgtaatcagccattgggcctatatatatggctccaggtaatcactgtgttgtttggtgatatggtgtgtaccacactcgacatggaccagaggaagcaaaggaaagagttgtctcaagagatcagaaagaaaattatagacaagcatgttaaaggtaaaggctataagaccatctccaagcaactagatgttcctgtgactacagttgcacatattattcagaagtttaagatccatgggactgtagccaacctccttggacgtggccgcaggaggaaaattgatgacaaatctaagagacggataatccgaatggtaacaaaagagcctagaaagacttctaaagagattcaaggtgaacttcatgctcaaggaacatcagtgtcagatcgcac

Function

NR:

description
PREDICTED: contactin-associated protein-like 4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU58333 True 401 TUCP 0.42 1 25281886 25282286

Neighbor

gene id symbol gene type direction distance location
zfpl1 zfpl1 coding downstream 18758 25231235 ~ 25263128 (-)
LOC122346005 LOC107727699,LOC107595976,LOC107660332 coding downstream 378597 24814609 ~ 24903289 (-)
taf6 taf6,LOC103372846 coding downstream 499238 24759478 ~ 24782648 (-)
sat2b sat2,sat2b,LOC107596022 coding downstream 530604 24749282 ~ 24751282 (-)
LOC122345804 LOC107730346,LOC107595984,LOC107684368 coding downstream 557977 24714443 ~ 24723909 (-)
LOC122345796 pak3,LOC107566210,LOC107712492,LOC103475835,LOC103141826,LOC108245238,LOC107093501 coding upstream 21189 25303475 ~ 25446662 (-)
LOC122345798 dcx coding upstream 188366 25470652 ~ 25523837 (-)
hip1rb hip1r,hip1rb,LOC107571022 coding upstream 335825 25618111 ~ 25651008 (-)
kntc1 kntc1 coding upstream 373221 25655507 ~ 25708679 (-)
trnal-cag_26 NA coding upstream 595385 25877671 ~ 25877755 (-)
G39401 NA non-coding downstream 105537 25175308 ~ 25176349 (-)
G39384 NA non-coding downstream 230368 25051181 ~ 25051518 (-)
G39377 NA non-coding downstream 262395 25019249 ~ 25019491 (-)
G39375 NA non-coding downstream 265045 25016561 ~ 25016841 (-)
trnag-gcc_23 NA non-coding downstream 286654 24995162 ~ 24995232 (-)
G39456 NA non-coding upstream 15590 25297876 ~ 25299229 (-)
G39458 NA non-coding upstream 17237 25299523 ~ 25299916 (-)
G39470 NA non-coding upstream 171226 25453512 ~ 25453834 (-)
G39490 NA non-coding upstream 246597 25528883 ~ 25529111 (-)
G39503 NA non-coding upstream 275010 25557296 ~ 25557522 (-)
LOC122345923 NA other downstream 523218 24754202 ~ 24758668 (-)
naa38 naa38 other downstream 533276 24746672 ~ 24748610 (-)
anapc2 anapc2,LOC107559737,LOC107730340,LOC107746468,LOC107683706,LOC107595991,LOC107684355 other downstream 687770 24587724 ~ 24594116 (-)
tmc2a tmc2a,tmc1,LOC107684381,LOC107596032,LOC108437175,LOC107730318,LOC108259782 other downstream 1004582 24265464 ~ 24277304 (-)
G39113 NA other downstream 1081390 24197705 ~ 24200496 (-)
LOC122344921 NA other upstream 279688 25561974 ~ 25568686 (-)
LOC122345426 smpx,LOC107705278,LOC107671350,LOC107590224,LOC107663668,LOC107586736,LOC107721880 other upstream 1817529 27099815 ~ 27107385 (-)
isca1 isca1,LOC107702919,LOC107662049 other upstream 2100635 27382921 ~ 27398741 (-)
LOC122344874 NA other upstream 2603755 27886041 ~ 27895454 (-)
G40080 pappaa,pappa,LOC107556005,LOC107558864,LOC107739977,LOC107675511,LOC107728218 other upstream 2973542 28255828 ~ 28264704 (-)

Expression


Co-expression Network