G39456


Basic Information

Item Value
gene id G39456
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 25297876 ~ 25299229 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU58377
ccagtgcagtgttgacagaaccgggctaatatgatcatacttcctagttctagtaaggactctggctgctgcgttttggactagctgaagtttgtttattaagcgtgcagaacaaccacccaataaagcattgcaataatctaaccttgaggtcataaacgcatgaattaatatttctgcattagaggttgaaagcataggtcgtaatttagatatatttttaagatggaaaaacgcagttttacagatgctagaaacatgattttcaaaggaaagattgcggtcaaacagcacacctaggttcctcaCTGacgatgaagaattaacagagcagccatcaagtgataggctgtgttctagattattatttgtggggtttttaggtccaattattagcacctctgttttttcagaatttaacattaagaagttactcatcatccagaagttactcatcactcttccaccaggaccaggacagcgcttggggggGAGTGTGATGAGCGTCCCGAGGatccatcagcgttgccctgggaacaaacctgGAACACCTGCACCAGCCACTCATCGACGGATTCaccgcacctggagctcgtcaGCCGCGGACCAGATAAGCCCGGCTAGGCGGCGGCTTCAGggagccacgagactccggaCTGCacgctaacctgttgtctctctctttgtctcccagaagctacaccGTGACGGgcctacctgagctaattcccctaTTGCCTCACTGTGGACTCCCTCACTGTTCTGAGCAAGGGAAGCACcaagacgactcaccgctgcactcaccggactcaccgctgcactcaccggactcaccgctgcactcaccggactcaccgctgcactcaccggactcaccgctgcactcatcGGACTCACCGAACTCACCGCTCACGTACCGTGTGTTGCCTAATAAATACACCTTCCGGGGGTTTCAattcacctgtttctcttgtgcttcctctgcctcgccacaatatatatatatatatatatatatatatataaaaacactgcttAGCCAAGTAGAACAAAATGGACATATTAGAACACAAAACCTTCCACAATTGCAATTAAACAGTCattcactgtattttattaatgcttccttaataacattttgtacatgtttgtttgttttatgaatgttttattcatttttatggaaCAGTTATCTTGCATTATCCAGGAACAActaaacttaaaattatataaaaagaattatatttgttttgcacaCTATTCTGCACAATACTGTTAAAATTGTATGTTATGGCCATAGCTTTGTAGGCAACAGCACTTCCATTGATCAGAGCCAGAGTCCTGGCTTAAAGTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU58377 True 1354 lncRNA 0.44 1 25297876 25299229

Neighbor

gene id symbol gene type direction distance location
zfpl1 zfpl1 coding downstream 34748 25231235 ~ 25263128 (-)
LOC122346005 LOC107727699,LOC107595976,LOC107660332 coding downstream 394587 24814609 ~ 24903289 (-)
taf6 taf6,LOC103372846 coding downstream 515228 24759478 ~ 24782648 (-)
sat2b sat2,sat2b,LOC107596022 coding downstream 546594 24749282 ~ 24751282 (-)
LOC122345804 LOC107730346,LOC107595984,LOC107684368 coding downstream 573967 24714443 ~ 24723909 (-)
LOC122345796 pak3,LOC107566210,LOC107712492,LOC103475835,LOC103141826,LOC108245238,LOC107093501 coding upstream 4246 25303475 ~ 25446662 (-)
LOC122345798 dcx coding upstream 171423 25470652 ~ 25523837 (-)
hip1rb hip1r,hip1rb,LOC107571022 coding upstream 318882 25618111 ~ 25651008 (-)
kntc1 kntc1 coding upstream 356278 25655507 ~ 25708679 (-)
trnal-cag_26 NA coding upstream 578442 25877671 ~ 25877755 (-)
G39401 NA non-coding downstream 121527 25175308 ~ 25176349 (-)
G39384 NA non-coding downstream 246358 25051181 ~ 25051518 (-)
G39377 NA non-coding downstream 278385 25019249 ~ 25019491 (-)
G39375 NA non-coding downstream 281035 25016561 ~ 25016841 (-)
trnag-gcc_23 NA non-coding downstream 302644 24995162 ~ 24995232 (-)
G39458 NA non-coding upstream 294 25299523 ~ 25299916 (-)
G39470 NA non-coding upstream 154283 25453512 ~ 25453834 (-)
G39490 NA non-coding upstream 229654 25528883 ~ 25529111 (-)
G39503 NA non-coding upstream 258067 25557296 ~ 25557522 (-)
G39506 NA non-coding upstream 259646 25558875 ~ 25559218 (-)
G39413 LOC102215562 other downstream 15590 25281886 ~ 25282286 (-)
LOC122345923 NA other downstream 539208 24754202 ~ 24758668 (-)
naa38 naa38 other downstream 549266 24746672 ~ 24748610 (-)
anapc2 anapc2,LOC107559737,LOC107730340,LOC107746468,LOC107683706,LOC107595991,LOC107684355 other downstream 703760 24587724 ~ 24594116 (-)
tmc2a tmc2a,tmc1,LOC107684381,LOC107596032,LOC108437175,LOC107730318,LOC108259782 other downstream 1020572 24265464 ~ 24277304 (-)
LOC122344921 NA other upstream 262745 25561974 ~ 25568686 (-)
LOC122345426 smpx,LOC107705278,LOC107671350,LOC107590224,LOC107663668,LOC107586736,LOC107721880 other upstream 1800586 27099815 ~ 27107385 (-)
isca1 isca1,LOC107702919,LOC107662049 other upstream 2083692 27382921 ~ 27398741 (-)
LOC122344874 NA other upstream 2586812 27886041 ~ 27895454 (-)
G40080 pappaa,pappa,LOC107556005,LOC107558864,LOC107739977,LOC107675511,LOC107728218 other upstream 2956599 28255828 ~ 28264704 (-)

Expression


Co-expression Network