LOC122344921



Basic Information


Item Value
gene id LOC122344921
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 25561974 ~ 25568686 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence


>TU58432
AGGTTGACCATAATCTTGTATGGATTAAAGAAAAGGTAGATAATTAATACTTCACACTTTCATAATGGGTGAAGCACATGCCGTATGGAAAGCGATTTAGGTGACGATTGTCATTAGAAAGCAACAGCATTCGCATTTCGAGCACATTCTTCGGTTCACAGATTTCTAATATAATCATCTGAAGTCCGAGGAGAATAGCGGTGATATGTAGCGGTCTCAGTGTGATTCAATTAGGCTCTTTAATGAAGATGCTATAACAAGCCTGCGGTATCATCATCAACACTCGCAAGGTCATCACTGACATCAAACGGTGTCGTCTTCCGTTCATGAATTTTTAAACGTTTGTGAGACTACCAGAGAAAGGCACGGTTTAAAAAcgactatactatactataattGTTCTggttagaaaaacaaacaaactgaaattgcGTAAATAACGTTGCGCTTCATCGAATCATCTGTGAAGATTCCGGCGGATTACGTTTTTCTGCGTGTACATTGAATAAACTGTGAAGGCGCTGCCGCTGTCGCGCGACATTCACGACGGGAGACATACATCTGTTTTCTTCCTGGATGCTCCAAGATGATGAAATCGACATTTCTAAGATATGCTGTTTATGTGCAGATCTGCATTTGTTGTACAACACCATGGGGAGACGATAACTGGGAGTAGTTCCGGTTTCATTTCAGTgggctttatatatatatatatataaatatatattttaataccacGAACGGACTATCCTTCTTTCATCATGATAGATGAGCGAATCATTTGGAGGAACTTTTTCACGCCTTCACCCGACGATTTGCCTAGACTGTTGCAAAATGGATCAACCGAGGAACTGATTTGGACCACCACCGTGGCACACATAGGACGTCCGGATCCCAGATTGCCGAGTTTATCCACATATCTGggactttttgtgtgtttgttgctgTTTCTGCTGGCCCTAATGATTGTGATGCTTTACCGGATGAAACACACTATCGCACCTTTACCGTCAGACGTGGAGAGCGTGGGGCAAACAGAGATGTTTCCTGAGgATGGGAGTGAAGTGTCCATCTATTCTGCTGACTGATCTCATCCAACCTTCATTTGCCAGTAACATGTGTGGAAGGTGTACATTTTGTCTTTGACAGAATATTTGATACCAAAACCccaaaccccaaaaaaaaaaaaaacaaaactggagCATATCAATTTATAGTATATCAGATGTAATATTGCAGTTTTCTGCTGTTTGTCCAGTTCTGAGTGGAGCATGTGAAAATGAGTGTGTATATAGGTGAATctaatgaagaagaagaagaaaagatcCAGGTTATATTTCATCCCATAAtggaagaagaaaataaactcTATTTTACATAAACAACATTAAGCTGGTTTAATGTGAAAATGTCAGTACTCTCTTGTTCTATgatacagtaaataaaactaTCATGCTAACAAAAGtagtaatatttgcataatttcaaaTCAATACAAGCAAATAGTGCTGCTACCTAGATGTGTAATTACTATTGTActtattataaatgttcttATCTTGATGCAATAGACATGATTATCATGACACAAGatgctctttcttcttttcctgACCTAATGAAATAGGTGGTGTGGTtgtttaattgtaatgaaaataaGGACACAAAGTCTAAACTTCTGCCAGGGCcacaacaatataaatataatacacagAGACATCACAAGCCACCAAATGGCTCATGGCTAGTCAAGACCCATACAAAAAAGCAAGAATATATTCACAAAGTGCCCTGTGTGGTTAAGTGATTGTGAAGCCatgcatttttgtcattattcgACCTGTTTTCCAGTTTtacaagtttagtttttattttgctatatgAGAAATTATCTCACGAGAGAATGTTAACCCATTTTAAATACGGCCAATAGGAAAGGACTTGAGGAGGATGATTTGTTGTGATGTGAAAGTTGAATTGTTGGGTAAGTGTGTTTGGCATTAGTGTGGTTAAGATTTACTTGTTTGATACAAAggaaaaaagttcattttgacATTGTCAACTGAGATGTATTTGGAGTTTGGCTAGACTTAACTAGTATGCTAAAAGTTGGTTGGCTTTACATTATGCTTTACCCTGAAATAAATTCTGCTGTCCTAAGTTCATGATTATAAACCACCATGAGTCTCTACACTTgagttttattgcttttttcagTAAGGCAACTTTTTGGTGGGGAATTAActgcaaaattactaaaacctaATCTGTTAATGCTGAATTTGCTATTGCAAGAACGTgtaatagaatttattacagaatattaGAATTTATTTCCCTATGTTTTTTACAGatatacagattgtgtcaaagcactgaacagtataaaatagaagaatacaataatattcatgttataatgatgagattgaacaaCAAGTCTGCATTGTAGTCATTCATACTAATGAGACTTGAATGCCGTTTGTTTGGCCTTGACTCAAAATGCAGTTACAGTGGTTTTGTG
>XM_043238566.1
AGCACATGCCGTATGGAAAGCGATTTAGGTGACGATTGTCATTAGAAAGCAACAGCATTCGCATTTCGAGCACATTCTTCGGTTCACAGATTTCTAATATAATCATCTGAAGTCCGAGGAGAATAGCGGTGATATGTAGCGGTCTCAGTGTGATTCAATTAGGCTCTTTAATGAAGATGCTATAACAAGCCTGCGGTATCATCATCAACACTCGCAAGGTCATCACTGACATCAAACGGTGTCGTCTTCCGTTCATGAATTTTTAAACGTTTGTGAGACTACCAGAGAAAGGCACGGTTTAAAAAcgactatactatactataattGTTCTggttagaaaaacaaacaaactgaaattgcGTAAATAACGTTGCGCTTCATCGAATCATCTGTGAAGATTCCGGCGGATTACGTTTTTCTGCGTGTACATTGAATAAACTGTGAAGGCGCTGCCGCTGTCGCGCGACATTCACGACGGGAGACATACATCTGTTTTCTTCCTGGATGCTCCAAGATGATGAAATCGACATTTCTAAGATATGCTGTTTATGTGCAGATCTGCATTTGTTGTACAACACCATGGGGAGACGATAACTGGGAGTAGTTCCGGTTTCATTTCAGTgggctttatatatatatatatataaatatatattttaataccacGAACGGACTATCCTTCTTTCATCATGATAGATGAGCGAATCATTTGGAGGAACTTTTTCACGCCTTCACCCGACGATTTGCCTAGACTGTTGCAAAATGGATCAACCGAGGAACTGATTTGGACCACCACCGTGGCACACATAGGACGTCCGGATCCCAGATTGCCGAGTTTATCCACATATCTGggactttttgtgtgtttgttgctgTTTCTGCTGGCCCTAATGATTGTGATGCTTTACCGGATGAAACACACTATCGCACCTTTACCGTCAGACGTGGAGAGCGTGGGGCAAACAGAGATGTTTCCTGAGgATGGGAGTGAAGTGTCCATCTATTCTGCTGACTGATCTCATCCAACCTTCATTTGCCAGTAACATGTGTGGAAGGTGTACATTTTGTCTTTGACAGAATATTTGATACCAAAACCccaaaccccaaaaaaaaaaaaaacaaaactggagCATATCAATTTATAGTATATCAGATGTAATATTGCAGTTTTCTGCTGTTTGTCCAGTTCTGAGTGGAGCATGTGAAAATGAGTGTGTATATAGGTGAATctaatgaagaagaagaagaaaagatcCAGGTTATATTTCATCCCATAAtggaagaagaaaataaactcTATTTTACATAAACAACATTAAGCTGGTTTAATGTGAAAATGTCAGTACTCTCTTGTTCTATgatacagtaaataaaactaTCATGCTAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU58432 True 2524 TUCP 0.37 2 25561974 25568686
XM_043238566.1 False 1387 mRNA 0.40 2 25563039 25568614

Neighbor


gene id symbol gene type direction distance location
LOC122345798 dcx coding downstream 38137 25470652 ~ 25523837 (-)
LOC122345796 pak3,LOC107566210,LOC107712492,LOC103475835,LOC103141826,LOC108245238,LOC107093501 coding downstream 115312 25303475 ~ 25446662 (-)
zfpl1 zfpl1 coding downstream 298846 25231235 ~ 25263128 (-)
LOC122346005 LOC107727699,LOC107595976,LOC107660332 coding downstream 658685 24814609 ~ 24903289 (-)
taf6 taf6,LOC103372846 coding downstream 779326 24759478 ~ 24782648 (-)
hip1rb hip1r,hip1rb,LOC107571022 coding upstream 49425 25618111 ~ 25651008 (-)
kntc1 kntc1 coding upstream 86821 25655507 ~ 25708679 (-)
trnal-cag_26 NA coding upstream 308985 25877671 ~ 25877755 (-)
trnal-cag_27 NA coding upstream 318672 25887358 ~ 25887441 (-)
trnal-aag_30 NA coding upstream 319828 25888514 ~ 25888596 (-)
G39506 NA non-coding downstream 2756 25558875 ~ 25559218 (-)
G39503 NA non-coding downstream 4452 25557296 ~ 25557522 (-)
G39490 NA non-coding downstream 32863 25528883 ~ 25529111 (-)
G39470 NA non-coding downstream 108140 25453512 ~ 25453834 (-)
G39458 NA non-coding downstream 262058 25299523 ~ 25299916 (-)
G39514 NA non-coding upstream 13653 25582339 ~ 25583014 (-)
G39572 NA non-coding upstream 159551 25728237 ~ 25728470 (-)
G39574 NA non-coding upstream 214293 25782979 ~ 25783591 (-)
G39579 NA non-coding upstream 549788 26118474 ~ 26119083 (-)
G39585 NA non-coding upstream 584779 26153465 ~ 26153703 (-)
G39413 LOC102215562 other downstream 279688 25281886 ~ 25282286 (-)
LOC122345923 NA other downstream 803306 24754202 ~ 24758668 (-)
naa38 naa38 other downstream 813364 24746672 ~ 24748610 (-)
anapc2 anapc2,LOC107559737,LOC107730340,LOC107746468,LOC107683706,LOC107595991,LOC107684355 other downstream 967858 24587724 ~ 24594116 (-)
tmc2a tmc2a,tmc1,LOC107684381,LOC107596032,LOC108437175,LOC107730318,LOC108259782 other downstream 1284670 24265464 ~ 24277304 (-)
LOC122345426 smpx,LOC107705278,LOC107671350,LOC107590224,LOC107663668,LOC107586736,LOC107721880 other upstream 1531129 27099815 ~ 27107385 (-)
isca1 isca1,LOC107702919,LOC107662049 other upstream 1814235 27382921 ~ 27398741 (-)
LOC122344874 NA other upstream 2317355 27886041 ~ 27895454 (-)
G40080 pappaa,pappa,LOC107556005,LOC107558864,LOC107739977,LOC107675511,LOC107728218 other upstream 2687142 28255828 ~ 28264704 (-)
LOC122345120 LOC107728794,LOC107696375,LOC107590009,LOC107739482 other upstream 3755296 29323982 ~ 29326115 (-)

Expression



Co-expression Network