G39514



Basic Information


Item Value
gene id G39514
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 25582339 ~ 25583014 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence


>TU58435
gaaagaaattaactttatttgaacaaaaaagtcTTTGTGTAATAATCCCACAAAGGGGTGAAACAGATGGCAGTCTACTCCAGCCACGatcccagctgcagaggaggTGAAGGATGGATCATCTAACCGACACAGTTCGATGGGACAAAAGGTGAACCAGGCCCAACCGGTGGAGCAGGAAAAGGGTGGCCGGCCAAAGCGGTCGCCGCGAAGCCTCCCACTGTAGCCACGTCCAACATCCACCCACTAGAAGACCGAGACAGGCACTGGCACCCAAAGGTCGTCGGTGAGGGGAGAGTCCTGAGCTGGGCAAAAAGCGAACTGGAGAGATGGGGGGCAGAAGACAGGgggaaaaactaataaaaatagaaaaaacacaaaaaacaaaaagcattaacTAGACCGAGAACAGGACTAAGACTGGACAAATGCAAACAGATCAGACTGGTCAACAGAGGTTCAGAGTCAGAACGAACTAACATTAGACGAcggactgacaaaggacagaaaatacaaggagattaagtagagagggtaattaacagaaatggggtgcaggagtgtgaaacaattagggttaacaagaggggaggagttaacagcaaagcacatggcgagctgtcaaaacaaagaccatgtgcttcaggacaacaaaacacaagacaaacacaacaag

Function


GO:

id name namespace
GO:0042219 cellular modified amino acid catabolic process biological_process

KEGG:

id description
ko00600 Sphingolipid metabolism

RNA


RNA id representative length rna type GC content exon number start site end site
TU58435 True 676 lncRNA 0.47 1 25582339 25583014

Neighbor


gene id symbol gene type direction distance location
LOC122345798 dcx coding downstream 58502 25470652 ~ 25523837 (-)
LOC122345796 pak3,LOC107566210,LOC107712492,LOC103475835,LOC103141826,LOC108245238,LOC107093501 coding downstream 135677 25303475 ~ 25446662 (-)
zfpl1 zfpl1 coding downstream 319211 25231235 ~ 25263128 (-)
LOC122346005 LOC107727699,LOC107595976,LOC107660332 coding downstream 679050 24814609 ~ 24903289 (-)
taf6 taf6,LOC103372846 coding downstream 799691 24759478 ~ 24782648 (-)
hip1rb hip1r,hip1rb,LOC107571022 coding upstream 35097 25618111 ~ 25651008 (-)
kntc1 kntc1 coding upstream 72493 25655507 ~ 25708679 (-)
trnal-cag_26 NA coding upstream 294657 25877671 ~ 25877755 (-)
trnal-cag_27 NA coding upstream 304344 25887358 ~ 25887441 (-)
trnal-aag_30 NA coding upstream 305500 25888514 ~ 25888596 (-)
G39506 NA non-coding downstream 23121 25558875 ~ 25559218 (-)
G39503 NA non-coding downstream 24817 25557296 ~ 25557522 (-)
G39490 NA non-coding downstream 53228 25528883 ~ 25529111 (-)
G39470 NA non-coding downstream 128505 25453512 ~ 25453834 (-)
G39458 NA non-coding downstream 282423 25299523 ~ 25299916 (-)
G39572 NA non-coding upstream 145223 25728237 ~ 25728470 (-)
G39574 NA non-coding upstream 199965 25782979 ~ 25783591 (-)
G39579 NA non-coding upstream 535460 26118474 ~ 26119083 (-)
G39585 NA non-coding upstream 570451 26153465 ~ 26153703 (-)
LOC122344941 NA non-coding upstream 789605 26372619 ~ 26373822 (-)
LOC122344921 NA other downstream 13653 25561974 ~ 25568686 (-)
G39413 LOC102215562 other downstream 300053 25281886 ~ 25282286 (-)
LOC122345923 NA other downstream 823671 24754202 ~ 24758668 (-)
naa38 naa38 other downstream 833729 24746672 ~ 24748610 (-)
anapc2 anapc2,LOC107559737,LOC107730340,LOC107746468,LOC107683706,LOC107595991,LOC107684355 other downstream 988223 24587724 ~ 24594116 (-)
LOC122345426 smpx,LOC107705278,LOC107671350,LOC107590224,LOC107663668,LOC107586736,LOC107721880 other upstream 1516801 27099815 ~ 27107385 (-)
isca1 isca1,LOC107702919,LOC107662049 other upstream 1799907 27382921 ~ 27398741 (-)
LOC122344874 NA other upstream 2303027 27886041 ~ 27895454 (-)
G40080 pappaa,pappa,LOC107556005,LOC107558864,LOC107739977,LOC107675511,LOC107728218 other upstream 2672814 28255828 ~ 28264704 (-)
LOC122345120 LOC107728794,LOC107696375,LOC107590009,LOC107739482 other upstream 3740968 29323982 ~ 29326115 (-)

Expression



Co-expression Network