G39579


Basic Information

Item Value
gene id G39579
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 26118474 ~ 26119083 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU58525
caatcaatcaatcaatcaatcatttttatttatatagcgcttttaacaacacaggttgcatcaaagcactgtacagtataatgacagggatgtataatgacgaaagtgaccaatttcttattaaatgcagagacggtctctgtagtcaattcaacgataatcactagaagttaagtgtccccaaccaagcaagccagaggcgacagcggcaaggaaacaaaaccccatgcatatagaatggagaaaaaaaaaccttgggagaaaccagactcagttggggtcagttctcctctgaccggacgcccagcacttaacttccagttcaattttaaacgctgctgtgtcaggtagtgtaaatgactttgtgtgtgtgtgtgtgtgtgtgtgcatcaggatctggtgatctgtcggacgggcatctaggtgttctggtctctgatgaacataatctctgggtgctgatccaccatctagtctggatacaaactgtgaaaacagattgagaaagaaacaggactaatattagcgtagatgccattctttttacgatgtcacaagtacatcgtattttaggagtagtgttcccggttccagcaaatctaagtaatgc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU58525 True 610 lncRNA 0.42 1 26118474 26119083

Neighbor

gene id symbol gene type direction distance location
trnag-gcc_64 NA coding downstream 7072 26111332 ~ 26111402 (-)
trnag-gcc_63 NA coding downstream 8904 26109500 ~ 26109570 (-)
trnag-gcc_62 NA coding downstream 17065 26101339 ~ 26101409 (-)
trnag-gcc_61 NA coding downstream 26478 26091926 ~ 26091996 (-)
trnag-gcc_60 NA coding downstream 28686 26089718 ~ 26089788 (-)
LOC122344705 mn1,mn1b coding upstream 413252 26532335 ~ 26544513 (-)
LOC122345107 NA coding upstream 434623 26553706 ~ 26566423 (-)
LOC122345741 pitpnb,LOC106585622,LOC108437411,LOC106580376 coding upstream 471842 26590925 ~ 26610395 (-)
kat5b kat5b,kat5a,kat5,LOC107597226,LOC107592273,LOC107732605,LOC107680373,LOC107687657,LOC108427799 coding upstream 496059 26615142 ~ 26625016 (-)
im:7154036 LOC107730539,LOC107674895,LOC107564073,LOC107755658,LOC107702932,LOC107571525 coding upstream 507110 26626193 ~ 26637865 (-)
G39574 NA non-coding downstream 334883 25782979 ~ 25783591 (-)
G39572 NA non-coding downstream 390004 25728237 ~ 25728470 (-)
G39514 NA non-coding downstream 535460 25582339 ~ 25583014 (-)
G39506 NA non-coding downstream 559256 25558875 ~ 25559218 (-)
G39503 NA non-coding downstream 560952 25557296 ~ 25557522 (-)
G39585 NA non-coding upstream 34382 26153465 ~ 26153703 (-)
LOC122344941 NA non-coding upstream 253536 26372619 ~ 26373822 (-)
G39712 NA non-coding upstream 757507 26876590 ~ 26883175 (-)
G39738 LOC107705276,LOC107586737,LOC107671348,LOC107663665,LOC107721875 non-coding upstream 962918 27082001 ~ 27084786 (-)
LOC122344810 LOC107662059,LOC107548517 non-coding upstream 996884 27115967 ~ 27146962 (-)
LOC122344921 NA other downstream 549788 25561974 ~ 25568686 (-)
G39413 LOC102215562 other downstream 836188 25281886 ~ 25282286 (-)
LOC122345923 NA other downstream 1359806 24754202 ~ 24758668 (-)
naa38 naa38 other downstream 1369864 24746672 ~ 24748610 (-)
anapc2 anapc2,LOC107559737,LOC107730340,LOC107746468,LOC107683706,LOC107595991,LOC107684355 other downstream 1524358 24587724 ~ 24594116 (-)
LOC122345426 smpx,LOC107705278,LOC107671350,LOC107590224,LOC107663668,LOC107586736,LOC107721880 other upstream 980732 27099815 ~ 27107385 (-)
isca1 isca1,LOC107702919,LOC107662049 other upstream 1263838 27382921 ~ 27398741 (-)
LOC122344874 NA other upstream 1766958 27886041 ~ 27895454 (-)
G40080 pappaa,pappa,LOC107556005,LOC107558864,LOC107739977,LOC107675511,LOC107728218 other upstream 2136745 28255828 ~ 28264704 (-)
LOC122345120 LOC107728794,LOC107696375,LOC107590009,LOC107739482 other upstream 3204899 29323982 ~ 29326115 (-)

Expression


Co-expression Network