G39712


Basic Information

Item Value
gene id G39712
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 26876590 ~ 26883175 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU58747
tctctctctctgtctccctcccTGTTGTCTTGgaattttcaattcaaaatgaTGTGAAGACTGAGAAGGAAGAATCcaacaaatttgtctttgtcttgctttttatttctttgcgcaaaggaacaaaaaatgatctggtttacacacagtggagtctgtgagcaaagagataacagtgtgCTCACAGGctagaggttttataggcaaaagtatacattccaaggttGCTCAAATCCATCTTGAACCAATTGAAACAGTTCAAAGTCACGTCACCCATCTCGTGCTTACTGTGTCTGGTTGTTCTCAGTTTTCCTCCCGTCTTTAACACAGGTAAGGTGTTCTATACCCAGATGAGGTGGTTTAACCGTTGTCACGCATACATTACTTTCCCATGCCTCTAGCATCCCAGTTCTCTGTTTACACATTCGTGTTCATGGTCAGTACAATGGtgttacgaatatatatatatatatatatattatattgcttaATCTATCTTTCAGTGAAGTTAgtttaattcagtgttaaagtaaataataaaacattaaatgtaatcaattaaaataatttccattacact
>TU58749
tctctctctctgtctccctcccTGTTGTCTTGgaattttcaattcaaaatgaTGTGAAGACTGAGAAGGAAGAATCcaacaaatttgtctttgtcttgctttttatttctttgcgcaaaggaacaaaaaatgatctggtttacacacagtggagtctgtgagcaaagagataacagtgtgCTCACAGGctagaggttttataggcaaaagtatacattccaaggttGCTCAAATCCATCTTGAACCAATTGAAACAGTTCAAAGTCACGTCACCCATCTCGTGCTTACTGTCTTTAACACAGGTAAGGTGTTCTATACCCAGATGAGGTGGTTTAACCGTTGTCACGCATACATTACTTTCCCATGCCTCTAGCATCCCAGTTCTCTGTTTACACATTCGTGTTCATGGTCAGTACAATGGtgttacgaatatatatatatatatatatattatattgcttaATCTATCTTTCAGTGAAGTTAgtttaattcagtgttaaagtaaataataaaacattaaatgtaatcaattaaaataatttccattacact

Function

GO: NA

KEGG:

id description
ko00830 Retinol metabolism
ko00625 Chloroalkane and chloroalkene degradation
ko00626 Naphthalene degradation
ko00980 Metabolism of xenobiotics by cytochrome P450
ko00982 Drug metabolism - cytochrome P450
ko05204 Chemical carcinogenesis - DNA adducts

RNA

RNA id representative length rna type GC content exon number start site end site
TU58747 True 580 lncRNA 0.36 2 26876590 26883175
TU58749 False 552 lncRNA 0.35 2 26876590 26883175

Neighbor

gene id symbol gene type direction distance location
rsrc2 LOC107740083,LOC107674791,LOC107752237,LOC107702941,LOC107571524 coding downstream 6996 26863405 ~ 26869594 (-)
zcchc8 zcchc8,LOC107674788,LOC107740086,LOC107752243,LOC107560308 coding downstream 16711 26854036 ~ 26859879 (-)
clip1a clip1,clip1a,LOC107567280 coding downstream 24742 26821298 ~ 26851848 (-)
cdca5 cdca5,LOC107567277,LOC107698540 coding downstream 55953 26816920 ~ 26820637 (-)
si:dkey-273o13.3 LOC107758159,LOC107567285,LOC107698543,LOC107755655 coding downstream 66653 26802384 ~ 26809937 (-)
LOC122345160 mlxip,LOC107687059,LOC107712534,LOC107560310,LOC107702943 coding upstream 1395 26884570 ~ 26897222 (-)
unga ung,unga,LOC107712535,LOC107687060,LOC107560323,LOC107752258,LOC107702903 coding upstream 14288 26897463 ~ 26901674 (-)
LOC122345425 rps6ka4,LOC107758164,LOC107698546,LOC107567284,LOC107702937,LOC108427766 coding upstream 114374 26997549 ~ 27001260 (-)
LOC122345427 LOC107721568,LOC107697698,LOC107711701,LOC107654838,LOC108438743 coding upstream 118472 27001647 ~ 27014498 (-)
LOC122345424 klhl34,LOC107586735,LOC107671349,LOC107705277,LOC107721877,LOC107663667,LOC107590345 coding upstream 212205 27095380 ~ 27099719 (-)
LOC122344941 NA non-coding downstream 502768 26372619 ~ 26373822 (-)
G39585 NA non-coding downstream 722887 26153465 ~ 26153703 (-)
G39579 NA non-coding downstream 757507 26118474 ~ 26119083 (-)
G39574 NA non-coding downstream 1092999 25782979 ~ 25783591 (-)
G39572 NA non-coding downstream 1148120 25728237 ~ 25728470 (-)
G39738 LOC107705276,LOC107586737,LOC107671348,LOC107663665,LOC107721875 non-coding upstream 198826 27082001 ~ 27084786 (-)
LOC122344810 LOC107662059,LOC107548517 non-coding upstream 232792 27115967 ~ 27146962 (-)
LOC122344809 LOC107671984 non-coding upstream 243954 27127129 ~ 27128456 (-)
LOC122344808 LOC107671984 non-coding upstream 257240 27140415 ~ 27142658 (-)
G39857 NA non-coding upstream 305675 27188850 ~ 27189222 (-)
LOC122344921 NA other downstream 1307904 25561974 ~ 25568686 (-)
G39413 LOC102215562 other downstream 1594304 25281886 ~ 25282286 (-)
LOC122345923 NA other downstream 2117922 24754202 ~ 24758668 (-)
naa38 naa38 other downstream 2127980 24746672 ~ 24748610 (-)
anapc2 anapc2,LOC107559737,LOC107730340,LOC107746468,LOC107683706,LOC107595991,LOC107684355 other downstream 2282474 24587724 ~ 24594116 (-)
LOC122345426 smpx,LOC107705278,LOC107671350,LOC107590224,LOC107663668,LOC107586736,LOC107721880 other upstream 216640 27099815 ~ 27107385 (-)
isca1 isca1,LOC107702919,LOC107662049 other upstream 499746 27382921 ~ 27398741 (-)
LOC122344874 NA other upstream 1002866 27886041 ~ 27895454 (-)
G40080 pappaa,pappa,LOC107556005,LOC107558864,LOC107739977,LOC107675511,LOC107728218 other upstream 1372653 28255828 ~ 28264704 (-)
LOC122345120 LOC107728794,LOC107696375,LOC107590009,LOC107739482 other upstream 2440807 29323982 ~ 29326115 (-)

Expression


Co-expression Network