G40266


Basic Information

Item Value
gene id G40266
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 29685128 ~ 29685727 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU59587
GGGGACTTGACAAGAGGGGTAATGCGTTAACATGAACTGATAGCTCCGTAATGTAGCTATCATTAGGAGAGCGATAAATGCTAGACACTACTCAGAGGGAGAAACTGTTATTTAAGGTGTGTGAGTGATTAAATGCAGGTGAGCGTGATGAGTgcaatcaggtgtgtgtgtgtcatcagtgcagtgatgggaattgaagtccggagtaaaataaaatggtggTGTGAGTTATTGTGGTAAGGAAGTGACATATGGTGGTGAGTAAACGGGGAGGGATGGAGGGCCAGGTCCATGCTGTAGATCTCGGGACTGAAGCATAGCCAGGATGGAACAGGAGCCCCCCAGGGTGGAACAGACATAGAAGGAGCCCACCAGGTACCGTGCAAACAGTTTAGGAGCCCACCAGGGCTGAGCAGACGGAGATGGAGCAGGATCCCACAAGAGAGGAGCAGGAGGTGCAAGAGACCACTAGACCAGAGCAAACAACCCCCAGACTGGAGCTGACAGATCTGAAGACCACCATGGCGGAGCTTTA

Function

NR:

description
PREDICTED: calumenin

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU59587 True 535 lncRNA 0.51 2 29685128 29685727

Neighbor

gene id symbol gene type direction distance location
ak1 ak1,kad,LOC107704768,LOC107715674,LOC107674927 coding downstream 14943 29661018 ~ 29670185 (-)
LOC122345545 LOC107728794,LOC107590009,LOC107696375,LOC107696371,LOC107578696,LOC108263699 coding downstream 349440 29325983 ~ 29335688 (-)
LOC122345544 ubr2,LOC107669566,LOC107696377 coding downstream 361443 29303143 ~ 29323685 (-)
brinp1 brinp1 coding downstream 414428 29174951 ~ 29270700 (-)
LOC122344834 LOC108430399,LOC107568487,LOC105913012,LOC103355419 coding downstream 740364 28943741 ~ 28944764 (-)
fam78ab fam78ab,fam78a,LOC107704739,LOC107562331,LOC107674928,LOC107745627,LOC107741498,LOC107597938 coding upstream 152912 29838639 ~ 29846990 (-)
prrc2b prrc2b,LOC107704672 coding upstream 173825 29859552 ~ 29880103 (-)
LOC122344958 LOC107690080,LOC107566862,LOC107728455 coding upstream 225185 29910912 ~ 29919495 (-)
sapcd2 LOC107742165,LOC107660368,LOC107565658 coding upstream 243096 29928823 ~ 29943177 (-)
LOC122344964 LOC107721044,LOC107563395,LOC107558067 coding upstream 281680 29967407 ~ 29970909 (-)
G40264 NA non-coding downstream 38115 29646617 ~ 29647013 (-)
G40083 NA non-coding downstream 1354652 28326897 ~ 28330476 (-)
G40081 NA non-coding downstream 1392191 28292726 ~ 28292937 (-)
G40079 pappaa,LOC107739977,LOC107558864,LOC107675511,LOC107556005,LOC107728218 non-coding downstream 1429921 28254921 ~ 28255207 (-)
G40076 pappaa,pappa,LOC107739977,LOC107675511,LOC107558864,LOC107728218,LOC107556005,LOC106563270 non-coding downstream 1438463 28246418 ~ 28246665 (-)
G40268 LOC107741500,LOC107562332,LOC107704753 non-coding upstream 115467 29801194 ~ 29805802 (-)
LOC122344857 NA non-coding upstream 353727 30039454 ~ 30046148 (-)
LOC122345788 NA non-coding upstream 367885 30053612 ~ 30054797 (-)
G40422 NA non-coding upstream 420115 30105842 ~ 30106738 (-)
G40418 NA non-coding upstream 430681 30116408 ~ 30117863 (-)
eng LOC107562335,LOC107704777,LOC107741503 other downstream 30067 29614719 ~ 29655061 (-)
G40182 brinp1,LOC107715673,LOC107674904 other downstream 194924 29460585 ~ 29490204 (-)
LOC122345120 LOC107728794,LOC107696375,LOC107590009,LOC107739482 other downstream 359013 29323982 ~ 29326115 (-)
G40080 pappaa,pappa,LOC107556005,LOC107558864,LOC107739977,LOC107675511,LOC107728218 other downstream 1420424 28255828 ~ 28264704 (-)
LOC122344874 NA other downstream 1789674 27886041 ~ 27895454 (-)
LOC122344966 LOC107749532,LOC107566852,LOC107742171,LOC107565644,LOC107690083 other upstream 238975 29924702 ~ 29928675 (-)
rnf170 rnf170,LOC107721034,LOC107687247 other upstream 402239 30087966 ~ 30093576 (-)
fubp3 fubp3,LOC107689604,LOC107687236,LOC106566971 other upstream 905116 30590843 ~ 30613141 (-)
G40711 NA other upstream 945301 30631028 ~ 30733360 (-)
G40713 lzts3,LOC107567954,LOC107687254,LOC107574519,LOC795227,LOC107665914 other upstream 1103906 30789633 ~ 30792719 (-)

Expression


Co-expression Network