CI01000004_14934532_14938094


Basic Information

Item Value
gene id CI01000004_14934532_14938094
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 14933874 ~ 14938094 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_14934532_14938094.mRNA
GTTTAAATATATTGTGTATATATGTGCTCTCAGTTGTTATGGATATTTCTTTAAATTTATTTATTTATTTATTGGCTGTTAACTGCACACAGTGCACAGTGATGAATTTGATCAACACATGCTTGGGGTCGATAAGATTTATTAAATGTAAAGTCTCTTATGCTCAGCAAGACTGCAATTATTTGATCAAAAATACAGTAAAAAGTATATTGTGAAATATTATAGTTTTTTAATAGTATTTTATAATATAGTTTTTATTTTATTTTAATATATTTTAAAATCTAATTCGTTTTTGGCAAAGCTGAAATTTCAGCACCATTACTCGAGTCTTCAGTGTCACATGATCCTTCAGAAATCATTCTAATATGCTGATTTGGAGCTCAAGAAACATTTTATATCATTATCAATTATGGAAACAGTGCTGCTTAATATTTTTTAATTTTCCCAGGATTCTTTGATGAATAGAAAGTTATTTGAAATTAACATTATATTTGAATTTACTTTAAACATGTCTTTACTGTCACTTTTGATCAATTTAAAGTGTCCTCGCTGAATAAAAGTATAAATTAATTTTAAAAAGAGTCTTACTGACCCCAAACTTTTCAACAGTAATGTAGCTTACAGCAGTTGATATATTATCATAAAGTACTGTGTGAATATGAAATGCTGGTCTGATTTTGACTTTGTTCATAATATGACAGTTGGAGAGGATAAACCTGTCAGCGGCACAGACATTGCGGGCAGCATTTATCAAAAGAAAGAGAACCCAGGGCTCACTCAGGATATCATCATGAAGATACTGGAGAAGAAGAACGTGGAGCTCAACTTCACCGAGTCACTACTGCGCATGGCTGCAGATGATGTGGAGGAGTACATGATTGAAAGACCAGAGCAGGAATTCCAGGACCTGAACGAGAAAGCACGAGCCCTCAAACATATCCTGAGTAAAATCCCAGACGAGATCAACGACAGAGTGCGCTTCCTACAGACCATAAAAGACATCGCCAGTGCTATTAAGGAGCTGCTGGACACAGTCAACAATGTGTTTAAGAAATATCAGTATCAGAATCGCAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_14934532_14938094.mRNA True 1075 mRNA 0.34 4 14933874 14938094

Neighbor

gene id symbol gene type direction distance location
CI01000004_14919607_14929407 GOLIM4B coding upstream 4467 14919475 ~ 14929407 (+)
CI01000004_14910312_14915166 NA coding upstream 17895 14910114 ~ 14915979 (+)
CI01000004_14889786_14894594 KLHL6 coding upstream 38952 14889786 ~ 14894922 (+)
CI01000004_14877615_14885956 PAK2A, PAK2 coding upstream 47375 14877460 ~ 14886499 (+)
CI01000004_14864427_14865483 ING5B, ING5, ING5.L coding upstream 68121 14864098 ~ 14865753 (+)
CI01000004_15010164_15028433 NRD1A, NRDC coding downstream 72070 15010164 ~ 15028708 (+)
CI01000004_15048166_15051524 NA coding downstream 110072 15048166 ~ 15052817 (+)
CI01000004_15056504_15062261 RABGAP1L2 coding downstream 117828 15055922 ~ 15063180 (+)
CI01000004_15091390_15096502 GA45B, GADD45B, GADD45BB coding downstream 153106 15091200 ~ 15097173 (+)
CI01000004_15110181_15110483 NA coding downstream 171504 15109598 ~ 15110625 (+)
G33951 NA non-coding upstream 80432 14845345 ~ 14853442 (+)
G33924 NA non-coding upstream 125585 14768014 ~ 14808289 (+)
G33919 NA non-coding upstream 141759 14758132 ~ 14792115 (+)
G33662 NA non-coding upstream 398530 14535078 ~ 14535344 (+)
G33644 NA non-coding upstream 405093 14528530 ~ 14528781 (+)
G34004 NA non-coding downstream 97923 15036017 ~ 15036233 (+)
G34009 NA non-coding downstream 107148 15045242 ~ 15045445 (+)
G34017 NA non-coding downstream 156011 15094105 ~ 15094375 (+)
G34027 NA non-coding downstream 165256 15103350 ~ 15103577 (+)
G34028 NA non-coding downstream 165872 15103966 ~ 15104168 (+)
CI01000004_14036114_14036449 KIAA0040 other upstream 896974 14035393 ~ 14039142 (+)
CI01000004_12646972_12652534 NA other upstream 2278163 12646838 ~ 12652570 (+)
G31865 NA other upstream 2738727 12192130 ~ 12197418 (+)
CI01000004_11666900_11667179 NA other upstream 3266215 11666900 ~ 11667659 (+)
G31710 NA other upstream 3291474 11637251 ~ 11642400 (+)
G34220 NA other downstream 1001263 15939357 ~ 15939950 (+)
G33815 NA other downstream 1125321 16063415 ~ 16066464 (+)
G34400 NA other downstream 2039234 16971995 ~ 17025976 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_015711 pdcd10b coding NC_007113.7 CM002886.2 36721357 ~ 36731963 (+)