G40680


Basic Information

Item Value
gene id G40680
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 30504796 ~ 30512970 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU60191
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagtgtgtgtgtgtgtgagtgtgtgcgtgtgtgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttcacactgGCGATCCAAAGCCTCACCGTTGGCAGGTTTCCTCAGGGTGTGAGTTGGTGTCGATTCAGCAGAAAACACTCTTGTGTTTGTAGACGTTACGGATGAAACCTGAAGAGGAACTCTGGAGAAGAAAGTGTTTCAAGTGAttccattaaataaaacatttgacttTTACTACTTCAGGTTTCTTCTCACATTTCAAActgcttttattcagaaatttCATCAGTG

Function

GO:

id name namespace
GO:0001568 blood vessel development biological_process

KEGG:

id description
ko04350 TGF-beta signaling pathway
ko04390 Hippo signaling pathway

RNA

RNA id representative length rna type GC content exon number start site end site
TU60191 True 344 lncRNA 0.44 2 30504796 30512970

Neighbor

gene id symbol gene type direction distance location
trabd2a trabd2a,LOC107558059,LOC107570885,LOC107717329 coding downstream 340779 30122226 ~ 30164017 (-)
june LOC107687249,LOC107721038,LOC107563389,LOC107684195,LOC107735627 coding downstream 470584 30027830 ~ 30034212 (-)
thap1 thap1,LOC107563391,LOC107684196,LOC107687269,LOC107558071 coding downstream 492787 30006999 ~ 30012009 (-)
LOC122344968 mob3b,LOC107558072,LOC107563392,LOC107721040,LOC108414757 coding downstream 498827 29997436 ~ 30005969 (-)
LOC122344964 LOC107721044,LOC107563395,LOC107558067 coding downstream 533887 29967407 ~ 29970909 (-)
LOC122345124 si:zfos-128g4.1,LOC107675886,LOC107577831 coding upstream 7636 30520606 ~ 30523419 (-)
LOC122345715 LOC107687242,LOC107717337,LOC107558070 coding upstream 22864 30535834 ~ 30537915 (-)
LOC122344973 NA coding upstream 27527 30540497 ~ 30542440 (-)
LOC122344972 NA coding upstream 63318 30576288 ~ 30580328 (-)
ass1 ass1,LOC107740768,LOC107687233,LOC107689608 coding upstream 109234 30622204 ~ 30644747 (-)
G40671 NA non-coding downstream 13918 30490514 ~ 30490878 (-)
G40677 NA non-coding downstream 20554 30484016 ~ 30484242 (-)
G40676 NA non-coding downstream 22570 30482021 ~ 30482226 (-)
G40654 NA non-coding downstream 85389 30297394 ~ 30419407 (-)
G40418 NA non-coding downstream 386933 30116408 ~ 30117863 (-)
G40684 NA non-coding upstream 3095 30516065 ~ 30518455 (-)
G40670 ythdc2 non-coding upstream 51147 30564117 ~ 30564377 (-)
G40672 NA non-coding upstream 52714 30565684 ~ 30566156 (-)
G40698 NA non-coding upstream 54281 30567251 ~ 30570100 (-)
G40701 NA non-coding upstream 77227 30590197 ~ 30590640 (-)
rnf170 rnf170,LOC107721034,LOC107687247 other downstream 411220 30087966 ~ 30093576 (-)
LOC122344966 LOC107749532,LOC107566852,LOC107742171,LOC107565644,LOC107690083 other downstream 576121 29924702 ~ 29928675 (-)
eng LOC107562335,LOC107704777,LOC107741503 other downstream 849735 29614719 ~ 29655061 (-)
G40182 brinp1,LOC107715673,LOC107674904 other downstream 1014592 29460585 ~ 29490204 (-)
LOC122345120 LOC107728794,LOC107696375,LOC107590009,LOC107739482 other downstream 1178681 29323982 ~ 29326115 (-)
fubp3 fubp3,LOC107689604,LOC107687236,LOC106566971 other upstream 77873 30590843 ~ 30613141 (-)
G40711 NA other upstream 118058 30631028 ~ 30733360 (-)
G40713 lzts3,LOC107567954,LOC107687254,LOC107574519,LOC795227,LOC107665914 other upstream 276663 30789633 ~ 30792719 (-)
G40752 hspa5,LOC107686379,LOC107743071,LOC107687227,LOC107567952,LOC107734417,LOC107734415,LOC107686377 other upstream 304762 30817732 ~ 30826358 (-)
LOC122344987 LOC107591496,LOC107663763,LOC107725109,LOC107734348,LOC107563429,LOC107654309 other upstream 818379 31331349 ~ 31350449 (-)

Expression


Co-expression Network