G40708 (dnm1,LOC107568151,LOC107658356)


Basic Information

Item Value
gene id G40708
gene name dnm1,LOC107568151,LOC107658356
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 30720192 ~ 30725226 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU60247
tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagacattCAAACATGAGCTATGCTGACTCTAGAGCTGGGTGATATAGTTAAAGCATTTTGATGATATTTGGATGTGTCACCATCATCTGTAGATAAGattcaaaatgttaaacatgTAGCTGACAAATAAATATTGGACTGTGTCCTACGGGGCGACAGCATTCTTTTAATTCACCATAAGACACGTTCATATGTCAGCTACACACAACTAAACACAGGGAACAGataataagtatataataagtaatcaatttgtaatttttttttacacatttctgtCTATTAAGATCTaaaagatttcctttttttaaataattactacGAATTCAATCTTACAATCTAAAACGTTTTTACTTAACTACTTGAAAAggatattttataaaaacagatatttataatttacaagTTTTGAGTTCGGGGTCGATTTTTTTTTCGAGGATACGTTACTGTTTTTTCAAAgaggcattaaattgatcaaaagcaaagacaattataatgttacacatttctgcttgaaataaatgctgctctttcaACTTTCACAAAAATATCGAACAGCACAACTGTTACTGTAagactgataataatcagaatattagaacgatttctgaagatcatgtgacactgaagacactgAAAAATTctgctgcgcttcacagaaataaattacagctgAACAGATATTCAAACAGAAACCAGCTGTTCAcaattttaacagtatttttatccaataaatgcagcctctgtgAGCAGAAGAcacattcataaatataaaagatagcTCCTCAAACGTTTGAATGCTAGTGTGCTTACGATAAAACAGCGATATatgaaaaaggagaaaaggagGAACCCTGAACCGAGTCTAATGATCTGATCTTTGAAGAAAagtggaaaaatattaaaaatcagcGTGAATATTAGTTCTATCACCCAGCCCTACCGAGAACACACTGTGCGTCTGATGGCTTCGGTCTGTAACGTTTGAACGATAATAAGAGTCAGAAGCAGGACGCCAGACTATGGACACCGACTCTGACGCCGTGAGACACAATGAGCTGAATTTCAGTGATGGTTGCTTATCGTTTAAACGTTGGTATGGTGACGGTTAACTCACCCACACCACTGCACTTACTCCGGCGCTCAGAGGCTCACATTCCGCGGCTAAGAGCAGACGGATGTTCTTATTAGACTGCAGGACTAGAAGGTTAGTCTCGTCTGAGCATTTCTGAATGCTGCATGTACACCGTGCATCATTTCTGCTGCGCTAGCATCATCACCAGAGCCAGGGGTGTGCGATACTCTCCATAGGATTTTATGGATTGCAATATTTGCACAGTGTTCTTGTGCTCTTCGTATTCCAATGCAGGACACGAATGCATCGGACCTGCAGTTTTTGTCGGAtatgttaaacataaaatgcCGAATGCTGATGATAAAACATACcttgaatgtgaaattaaagCCCTAAGCAGGTGGCAGCAGGTCGCTGTTAATAAGTGAGTCGTTCCGCCTCATTGTCACTGAAAtgtttgattcattcaggaacgaaaAGACACTGTCACGCTGATCAGAGAGCAAAAAAAGCGCTTCTGAAATGATGTTTGTTGGggaaatagagcaaaaacagaAGCCACTAAATTCAATTCTTGTGTATGTCACATCAAAACGTCTTTTCTGCCCCGTCCTGTATTTGTGATCATTCtgagtgtgttttaataaactgaatCATGCCGCTAAAGAGCGCACTAGTCTAGACTTCATCATGTAACAACAATTACAGTATTATCACTGaccatatatatttatatttatatatatatcacacacccCAATTCTCTCTTAGATTGTATTTTTGAGAGGCGGTGCTAGCGCTGCAGACATGCACGCCTCAGATCTGAGCGCATTCTGATATGTTTCCAGCACAAGTGTGTTATTTCACGATGAGTGTGTGCTGAGCCTGACCTGGGCACGCTGGGAGGAGCGCGGTTCGGCCGAGACGGGACCTGAGGGGGGGGCCCACCGAAGGGGTCCGGGGAGGCCCCCGGGCGAGAGGGAACGGGCGGCCCTCCGGCAGCAGGGGGCCCCGGGGCCGAGCCGCGGGAACCTGGGCGTGCCGGAGGCCCCGGAGGAGGGGCCCGTCTCTGAGGGGTCGGGCTGGTCGCCGGAGACCTAACGGAGAAATATTGTTTCTTCTCAAtaagCAATCAGCTGATCCTGGAGCCACGCGTCTGTCCCGAACACACCTTCCTCCGGAGCCGGTGCGCTGCACCTGGAGCCACGAGTCGTCCACGGGCGGAGGCAGAGAGGTGGAGACGGTGGTGGTGCTGATGTCTCCGATGATGTTCAGCGCTTCTTTGAGAGCGTGGTACATCCGCAGCATCTCGTCGCGCCGCTGGGCCTGCTCCGCCGACTCCTCCATCAGCGTGTTCTGATCTCCACACGAGTACAGCTGAGCCAGCAGCTCCGCGTTGATGAACTCCTTCGTCTGAGGGACACCAGGAACATCTCACTGCTGGAAATCTGAGCTAAACATAGCTACCGTGGTAAAGGGCTGCTTCTCCAATCTGTCAATAATCACTCGCTCTCCTGTCGTTACAAACCCCGTGAGACCTTCGTTCAGAACACAAACgtagatattttggatgaaatctgagagctatctgaccctccatagacagcgaCAATTGATCCCGCTCCAGAAACTTGAGTCTCAGTGAGTCGACTTCAGTTTTGCAGCACAACAAGAATGTTTtttgcacaaacaaaaataacctaatttactcaaccattcttctccgCCGAGCTGAGAGCATCACGAGAGCTGAGAGACGTCAAATACATCCTGAAgtgctctccaaaatggcagaagacgTGAGTCAGGGGAGAAAAAAATGGTTGGgcaaattgttatttttgttttcttgccgCAAAATGATGAAGAAAGGTCtaacgggtttggaacgacatgagggtgagtcattttcattttggggtgaactaaccctttaatattgTGTATTAAGAACTAGTTTGACTAACGGGAGTTGCCAAGGGTTAAATCTTACTTTTCCAATACAAATAACAGCAATCTACCTTTTTATAACCcctttagaatttaaaaaagtcTTGAAAAGAAGCCATGTTTTCAGACTAGTCTAAACGctcaaaatgagcaaaaatatgACTTTGGTgcagatgctgatatttttCGGTTTATTACGAAATTACGCTGCTTGGTGAAAATCAATGAGATGTTTACGACCGCGCAGCAGATACCGACATCAAATGAATTATGTTTAGATCATTTTATGTCTCCAATATTATATCTTAAGAAGATCAGAGAGAGCAAATGAAGTTCCCTGCCATgcatattaacaataaaaatcacaatttacaaaatatctccatGGAACGTGGtcttaatatcctaatcatttctttggaataaaagaaaagcgGTTGCTGATTCACGTTGTCTTAGTTTATGATATTTCACGAATCAAGCCTTGTTTCAGTCACTTGAGCGCCTCGGCTGCAGACGAGCTTACATTATTGATCATCAGGTGCATGATGGTCTTGGGCATCAGGTCTCGCACAGTCTTGTTGACGATGCTCATGTAAGAGTCCACCAGGTTTCTGATGGTCTCCACCTGCCTCTCCAGCTGAGGGTCCATGGAGTGCATGAACCCGTCCGAGCCGTTCTCGTCTCCGGCGTcgctctgcacacacacacacacacacacacacacacacacacaatcacggAAAACGCCGGCGCAGAAGATGCACGAAAGATCGAAATGCCGCACAAAGCTCGTACCTTTTCCTTCTCCTGAGGGACGCCACGGGAAGCAgcgtgagagaaagagaagagcatTTTAAGGCGCATCGTTTGGATTCATTCATGCTACTCACTTCagaggagtctgaacacacaccaCCACGCGCTCGGGATAGACGCCGGCCCGCAGGAACGACGCTTTCCATCCGTCCACCTCCTCCTGACTCTCACAGGCCAGCTCCAGCTGACGGTAGTCCTTATACACGTT

Function

symbol description
dnm1 Enables identical protein binding activity. Involved in endosome organization and receptor-mediated endocytosis. Located in nucleoplasm. Implicated in developmental and epileptic encephalopathy 31. Biomarker of Alzheimer's disease.

NR:

description
PREDICTED: dynamin-1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU60247 True 4100 lncRNA 0.44 2 30720192 30725226

Neighbor

gene id symbol gene type direction distance location
ciz1a ciz1a,LOC107687257,LOC107571633,LOC107740230,LOC107689607 coding downstream 48096 30660119 ~ 30672096 (-)
surf2 surf2,LOC107740795,LOC107581206,LOC107743090 coding downstream 64235 30653163 ~ 30655957 (-)
surf4 surf4,LOC107740232,LOC107689610,LOC105890423,LOC103376134 coding downstream 67882 30646286 ~ 30652310 (-)
ass1 ass1,LOC107740768,LOC107687233,LOC107689608 coding downstream 75445 30622204 ~ 30644747 (-)
LOC122344972 NA coding downstream 139864 30576288 ~ 30580328 (-)
golga2 golga2,LOC107658391 coding upstream 8878 30734104 ~ 30754940 (-)
LOC122344907 NA coding upstream 40405 30765631 ~ 30769907 (-)
rabepk rabepk,LOC107743065,LOC107579283 coding upstream 105963 30831189 ~ 30835734 (-)
LOC122344688 LOC107743064,LOC107698017,LOC107734413 coding upstream 195591 30920817 ~ 30941882 (-)
cux2a NA coding upstream 217288 30942514 ~ 30951488 (-)
LOC122345983 NA non-coding downstream 9514 30708773 ~ 30710678 (-)
G40701 NA non-coding downstream 129552 30590197 ~ 30590640 (-)
G40698 NA non-coding downstream 150092 30567251 ~ 30570100 (-)
G40672 NA non-coding downstream 154036 30565684 ~ 30566156 (-)
G40670 ythdc2 non-coding downstream 155815 30564117 ~ 30564377 (-)
G40739 NA non-coding upstream 45488 30770714 ~ 30772024 (-)
G40751 hspa5,LOC107687227,LOC107567952 non-coding upstream 95899 30821125 ~ 30846878 (-)
G40762 NA non-coding upstream 141017 30866243 ~ 30919600 (-)
G40760 LOC108429729,LOC107563441 non-coding upstream 195625 30920851 ~ 30925197 (-)
LOC122344700 LOC108429729,LOC107563441 non-coding upstream 195952 30921178 ~ 30925197 (-)
fubp3 fubp3,LOC107689604,LOC107687236,LOC106566971 other downstream 107051 30590843 ~ 30613141 (-)
rnf170 rnf170,LOC107721034,LOC107687247 other downstream 626616 30087966 ~ 30093576 (-)
LOC122344966 LOC107749532,LOC107566852,LOC107742171,LOC107565644,LOC107690083 other downstream 791517 29924702 ~ 29928675 (-)
eng LOC107562335,LOC107704777,LOC107741503 other downstream 1065131 29614719 ~ 29655061 (-)
G40182 brinp1,LOC107715673,LOC107674904 other downstream 1229988 29460585 ~ 29490204 (-)
G40713 lzts3,LOC107567954,LOC107687254,LOC107574519,LOC795227,LOC107665914 other upstream 64407 30789633 ~ 30792719 (-)
G40752 hspa5,LOC107686379,LOC107743071,LOC107687227,LOC107567952,LOC107734417,LOC107734415,LOC107686377 other upstream 92506 30817732 ~ 30826358 (-)
LOC122344987 LOC107591496,LOC107663763,LOC107725109,LOC107734348,LOC107563429,LOC107654309 other upstream 606123 31331349 ~ 31350449 (-)
apooa apoo other upstream 977227 31702453 ~ 31711737 (-)
G41035 LOC107734367,LOC107665727,LOC107725151,LOC107591476,LOC107654325,LOC563292 other upstream 996044 31721270 ~ 31722906 (-)

Expression


Co-expression Network