G40751 (hspa5,LOC107687227,LOC107567952)


Basic Information

Item Value
gene id G40751
gene name hspa5,LOC107687227,LOC107567952
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 30821125 ~ 30846878 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU60329
ctttattttgcaATTGTGGTAGAAAGGTCTTCTACAGTTTCCAGATTTCAATAAATAACTTTGAGCATGTGACATGACGTTTATCCAGTAACCCCTGACCCGGAGCACCCTCCCGCTCATCGCCCCTCACAGAACTGCCTGACAACAGCAGCATCGAGCCTCAAACCAGGCTGACAAAATCTCCACCGGAGtgaagagaaaataagacaaCAAACGCAACTCTCTAACGCTTCTCATAAAGTCTTTTCCGAGATTGGATGCTTTACGTTCGCCCATCTTGTACAAAAATGTCCGTCGTGTTCAATATGTACACCTAGAGAGGCGAGGGCATCAACGCGACTGAAAACAGTGTCCAGACGATCTACAACTCGTCCTTGTCGCCCTGATCTTCGCCCTCCTCCGGCGGCGGGCCACCTGCGCTGCCGTACAGCTTGCTTACGATGGGCTGCACGACTTCCTCCAGCTCCTTCTTCTTGGCCTGGAAGTCCTCGAGATCTGCGTCCTGGTGAGACTCCAGCCACTCGATCTTCTCCTCGACGGCCTTCTCGATGGCCTCCTTGTCTTCAGAAGACAGCTTGCCGCCCAGCTTCTCTTTGTCTCCAATCTGGTTCTTCAGGGAGTAAGCGTAGCTCTCCAGCTCGTTGCGGGCGTCGATGCGCTCCTTCAGCTTCTTGTCCTCGTCGGCGAAGCGCTCTGCCTCGTTCACCATGCGCTCGATGTCCTCAGGTGTCAGGCGGTTCTGGTCGTTGGTGATGGTGATCTTGTTCTTGTTGCCCGTGCCCTTGTCTTCAGCGGTGACTCTCAAGATGCCGTTGACATCAATCTCGAAGGTGACCTCGATCTGAGGAACGCCACGGGGAGCCGGAGGGATGCCGGTCAGGTCAAAGGTGCCCAGGAGGTGGTTATCTTTAGTCAGTGGACGCTCACCTGGAA
>TU60330
ctttattttgcaATTGTGGTAGAAAGGTCTTCTACAGTTTCCAGATTTCAATAAATAACTTTGAGCATGTGACATGACGTTTATCCAGTAACCCCTGACCCGGAGCACCCTCCCGCTCATCGCCCCTCACAGAACTGCCTGACAACAGCAGCATCGAGCCTCAAACCAGGCTGACAAAATCTCCACCGGAGtgaagagaaaataagacaaCAAACGCAACTCTCTAACGCTTCTCATAAAGTCTTTTCCGAGATTGGATGCTTTACGTTCGCCCATCTTGTACAAAAATGTCCGTCGTGTTCAATATGTACACCTAGAGAGGCGAGGGCATCAACGCGACTGAAAACAGTGTCCAGACGATCTACAACTCGTCCTTGTCGCCCTGATCTTCGCCCTCCTCCGGCGGCGGGCCACCTGCGCTGCCGTACAGCTTGCTTACGATGGGCTGCACGACTTCCTCCAGCTCCTTCTTCTTGGCCTGGAAGTCCTCGAGATCTGCGTCCTGGTGAGACTCCAGCCACTCGATCTTCTCCTCGACGGCCTTCTCGATGGCCTCCTTGTCTTCAGAAGACAGCTTGCCGCCCAGCTTCTCTTTGTCTCCAATCTGGTTCTTCAGGGAGTAAGCGTAGCTCTCCAGCTCGTTGCGGGCGTCGATGCGCTCCTTCAGCTTCTTGTCCTCGTCGGCGAAGCGCTCTGCCTCGTTCACCATGCGCTCGATGTCCTCAGGTGTCAGGCGGTTCTGGTCGTTGGTGATGGTGATCTTGTTCTTGTTGCCCGTGCCCTTGTCTTCAGCGGTGACTCTCAAGATGCCGTTGACATCAATCTCGAAGGTGACCTCGATCTGAGGAACGCCACGGGGAGCCGGAGGGATGCCGGTCAGGTCAAAGGTGCCCAGGAGGTGGTTATCTTTAGTCAGTGGACGCTCACCTGGAA
>TU60332
ctttattttgcaATTGTGGTAGAAAGGTCTTCTACAGTTTCCAGATTTCAATAAATAACTTTGAGCATGTGACATGACGTTTATCCAGTAACCCCTGACCCGGAGCACCCTCCCGCTCATCGCCCCTCACAGAACTGCCTGACAACAGCAGCATCGAGCCTCAAACCAGGCTGACAAAATCTCCACCGGAGtgaagagaaaataagacaaCAAACGCAACTCTCTAACGCTTCTCATAAAGTCTTTTCCGAGATTGGATGCTTTACGTTCGCCCATCTTGTACAAAAATGTCCGTCGTGTTCAATATGTACACCTAGAGAGGCGAGGGCATCAACGCGACTGAAAACAGTGTCCAGACGATCTACAACTCGTCCTTGTCGCCCTGATCTTCGCCCTCCTCCGGCGGCGGGCCACCTGCGCTGCCGTACAGCTTGCTTACGATGGGCTGCACGACTTCCTCCAGCTCCTTCTTCTTGGCCTGGAAGTCCTCGAGATCTGCGTCCTGGTGAGACTCCAGCCACTCGATCTTCTCCTCGACGGCCTTCTCGATGGCCTCCTTGTCTTCAGAAGACAGCTTGCCGCCCAGCTTCTCTTTGTCTCCAATCTGGTTCTTCAGGGAGTAAGCGTAGCTCTCCAGCTCGTTGCGGGCGTCGATGCGCTCCTTCAGCTTCTTGTCCTCGTCGGCGAAGCGCTCTGCCTCGTTCACCATGCGCTCGATGTCCTCAGGTGTCAGGCGGTTCTGGTCGTTGGTGATGGTGATCTTGTTCTTGTTGCCCGTGCCCTTGTCTTCAGCGGTGACTCTCAAGATGCCGTTGACATCAATCTCGAAGGTGACCTCGATCTGAGGAACGCCACGGGGAGCCGGAGGGATGCCGGTCAGGTCAAAGGTGCCCAGGAGGTGGTTATCTTTAGTCAGTGGACGCTCACCTGGAA
>TU60333
TTGCTATATATCTTCACAGAGCATGATCGTTACTTAATGTGTCAATCATTTTTGGCACAATAGAAAAATCCATAATCCCATAGaatgtatttttgactattAAGACCAGAGTCACACATTTCTATCTATTTATCAACTACTGCAACTGAACTTTTTAACAGGACCAGGAGATTTCTCAAACAACAGCACTGTTCTTACCTAGTATTCGACAAACGTCGTCACAGTTTTGATTGATTTCATGAAGCCAGCGCTTGACGTTCACGAACGACTCGGCGCTGGTGACGTCATAAACCACTATAACACCGTGAGTGCCTCTATAGTACCTGAAAGAGAccaccacacagacacacaaccACATCAGGGCTCTGAAAATAAAGAGTGATCTGAGATCAGCCTCGATGCTGAAGGACAGCTCTGTAGCCACTGGGAGAAAATAAAGAGTAAATAACATCGACTTATGCACGGTTTTAAAAGTAGAACACAaggaaaagaacaaaacattcaacagaaaaaaattaaataaaaaatgctaaaaataaataaattaaaaattaaaaataaataaattaaaaattaatttaaaataaataaattaaataaaattattgtaaaagCAAAACGATTTAAAACgaaacactaaatatattttttgtttaactgcATGTTTTGtgaccaatattttttttttttaatgcttgaaATATCAAACTTAAAATCTCTGGCAAACTTCAGATAAATATTTCGCTCTAAGGTCCGACGCCCGGCATCCACTAAACCTCACACGTCCTGCGTTTATCACGTTTCAGACAACCGTGTCACGCTCTCATTGACCAGTGACGTTCACCAGCTCTACGTCACTGGACCCAGACACAACAAGCTCCGCCGAGGGTGACCGTGACTCTTTCACTTCGTGCGGCTGACATCACCGACAGGAAGTGGTTGTCTGACGTGACTCTTCTGGAGTGCATCTTTGAGGACGGCTCGCGCTTCGACGGCGTCAGCAGGTTTAAAGCGTGATTTCTTTCCCATGAGTCTCAACAGAGGCCGTTTCTGAGCTGAAATTGACTTATTCTAATAGGAGAGCGTGTCTCCGCGCTTCACATACCAGCCCACGCCGTCAACAGCAGCCTTTGTGAAGCTCGGAGGAACTCCTTGAAATACAGGACAAAATATCAGAACTGCATTGAAATGAAGCTCTCTCTCTTCAGCTAAAgacactttaatttatttattgaatatatttaatatttaatttaatatattcatttaattattaccaCCTAGATTTAATTTACCTCGATTTGCTTGGAACATTTCAGAGACAGGTCACATTATAAAGTGCATAATAGCatcttaataataaatgtataagaCTAAAGACTCGTAAGATtgtgaatgtgatttttaaaagattattctATTTTGCTGAGCTTAATTGTACACAATTTACAGctacaaaacaaactaaattcaagctaaaacttcttttttttaatataatttattttgtatcaaacctttattttgcaATTGTGGTAGAAAGGTCTTCTACAGTTTCCAGATTTCAATAAATAACTTTGAGCATGTGACATGACGTTTATCCAGTAACCCCTGACCCGGAGCACCCTCCCGCTCATCGCCCCTCACAGAACTGCCTGACAACAGCAGCATCGAGCCTCAAACCAGGCTGACAAAATCTCCACCGGAGtgaagagaaaataagacaaCAAACGCAACTCTCTAACGCTTCTCATAAAGTCTTTTCCGAGATTGGATGCTTTACGTTCGCCCATCTTGTACAAAAATGTCCGTCGTGTTCAATATGTACACCTAGAGAGGCGAGGGCATCAACGCGACTGAAAACAGTGTCCAGACGATCTACAACTCGTCCTTGTCGCCCTGATCTTCGCCCTCCTCCGGCGGCGGGCCACCTGCGCTGCCGTACAGCTTGCTTACGATGGGCTGCACGACTTCCTCCAGCTCCTTCTTCTTGGCCTGGAAGTCCTCGAGATCTGCGTCCTGGTGAGACTCCAGCCACTCGATCTTCTCCTCGACGGCCTTCTCGATGGCCTCCTTGTCTTCAGAAGACAGCTTGCCGCCCAGCTTCTCTTTGTCTCCAATCTGGTTCTTCAGGGAGTAAGCGTAGCTCTCCAGCTCGTTGCGGGCGTCGATGCGCTCCTTCAGCTTCTTGTCCTCGTCGGCGAAGCGCTCTGCCTCGTTCACCATGCGCTCGATGTCCTCAGGTGTCAGGCGGTTCTGGTCGTTGGTGATGGTGATCTTGTTCTTGTTGCCCGTGCCCTTGTCTTCAGCGGTGACTCTCAAGATGCCGTTGACATCAATCTCGAAGGTGACCTCGATCTGAGGAACGCCACGGGGAGCCGGAGGGATGCCGGTCAGGTCAAAGGTGCCCAGGAGGTGGTTATCTTTAGTCAGTGGACGCTCACCTGGAA

Function

symbol description
hspa5 Predicted to enable several functions, including ATP binding activity; ATP hydrolysis activity; and misfolded protein binding activity. Acts upstream of or within response to hypoxia and response to yeast. Located in extracellular region. Is expressed in several structures, including central nervous system; digestive system; immature eye; prechordal plate; and sensory system. Human ortholog(s) of this gene implicated in dopamine beta-hydroxylase deficiency. Orthologous to human HSPA5 (heat shock protein family A (Hsp70) member 5).

NR:

description
PREDICTED: 78 kDa glucose-regulated protein isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU60329 False 933 lncRNA 0.54 2 30821125 30828314
TU60330 False 933 lncRNA 0.54 2 30821125 30828314
TU60332 False 933 lncRNA 0.54 2 30821125 30828314
TU60333 True 2450 lncRNA 0.43 3 30821125 30846878

Neighbor

gene id symbol gene type direction distance location
LOC122344907 NA coding downstream 51218 30765631 ~ 30769907 (-)
golga2 golga2,LOC107658391 coding downstream 66185 30734104 ~ 30754940 (-)
ciz1a ciz1a,LOC107687257,LOC107571633,LOC107740230,LOC107689607 coding downstream 149029 30660119 ~ 30672096 (-)
surf2 surf2,LOC107740795,LOC107581206,LOC107743090 coding downstream 165168 30653163 ~ 30655957 (-)
surf4 surf4,LOC107740232,LOC107689610,LOC105890423,LOC103376134 coding downstream 168815 30646286 ~ 30652310 (-)
LOC122344688 LOC107743064,LOC107698017,LOC107734413 coding upstream 73939 30920817 ~ 30941882 (-)
cux2a NA coding upstream 95636 30942514 ~ 30951488 (-)
mcc mcc,LOC106565572 coding upstream 131715 30978593 ~ 31052589 (-)
rcl1 rcl1,LOC107701854,LOC107655287 coding upstream 207046 31053924 ~ 31064355 (-)
LOC122344691 NA coding upstream 227165 31074043 ~ 31081265 (-)
G40739 NA non-coding downstream 49101 30770714 ~ 30772024 (-)
G40708 dnm1,LOC107568151,LOC107658356 non-coding downstream 95899 30720192 ~ 30725226 (-)
LOC122345983 NA non-coding downstream 110447 30708773 ~ 30710678 (-)
G40701 NA non-coding downstream 230485 30590197 ~ 30590640 (-)
G40698 NA non-coding downstream 251025 30567251 ~ 30570100 (-)
G40762 NA non-coding upstream 19365 30866243 ~ 30919600 (-)
G40760 LOC108429729,LOC107563441 non-coding upstream 73973 30920851 ~ 30925197 (-)
LOC122344700 LOC108429729,LOC107563441 non-coding upstream 74300 30921178 ~ 30925197 (-)
LOC122344701 NA non-coding upstream 112566 30959444 ~ 30963507 (-)
LOC122344702 NA non-coding upstream 127440 30974318 ~ 30974883 (-)
G40713 lzts3,LOC107567954,LOC107687254,LOC107574519,LOC795227,LOC107665914 other downstream 28406 30789633 ~ 30792719 (-)
G40711 NA other downstream 87765 30631028 ~ 30733360 (-)
fubp3 fubp3,LOC107689604,LOC107687236,LOC106566971 other downstream 207984 30590843 ~ 30613141 (-)
rnf170 rnf170,LOC107721034,LOC107687247 other downstream 727549 30087966 ~ 30093576 (-)
LOC122344966 LOC107749532,LOC107566852,LOC107742171,LOC107565644,LOC107690083 other downstream 892450 29924702 ~ 29928675 (-)
LOC122344987 LOC107591496,LOC107663763,LOC107725109,LOC107734348,LOC107563429,LOC107654309 other upstream 484471 31331349 ~ 31350449 (-)
apooa apoo other upstream 855575 31702453 ~ 31711737 (-)
G41035 LOC107734367,LOC107665727,LOC107725151,LOC107591476,LOC107654325,LOC563292 other upstream 874392 31721270 ~ 31722906 (-)
tnca zmp:0000000846,LOC107715542,LOC107557573,LOC107591511,LOC102306937,LOC107725145 other upstream 1267018 32113896 ~ 32174064 (-)
LOC122346090 LOC107704013,LOC107725152,LOC107748063,LOC107654332,LOC107557589,LOC107594564 other upstream 1367153 32214031 ~ 32293782 (-)

Expression


Co-expression Network