G40752 (hspa5,LOC107686379,LOC107743071,LOC107687227,LOC107567952,LOC107734417,LOC107734415,LOC107686377)


Basic Information

Item Value
gene id G40752
gene name hspa5,LOC107686379,LOC107743071,LOC107687227,LOC107567952,LOC107734417,LOC107734415,LOC107686377
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 30817732 ~ 30826358 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU60335
GTTGAGTTCCTCAAACTTGGCGCGGGTCAGTGTCTCGGAGAAATCCTCACCCTCGAAGAAGGACTCGATCTCGATGCGTGCCTGATGCTGGGCAGACAGCGCTCTCTTGGCCTTCTCCACCTCACGACGCAGCTTCTGCACGGCGCGGTTGTCCTTACGCACGTCCTTTCCGGTCTTCTTCTTGTAGAGCTTGATGAAGTGCTCCATGACGCGCTGATCGAAGTCTTCCCCGCCGAGGTGAGTGTCTCCATTAGTGGCCACCACCTCGAAGACGCCGTTATCGATGGTCAACAGGGAAACGTCGAAGGTGCCGCCACCGAGATCAAACACCAGGATGTTCTTCTCACCGTCTTTCTTATCCAGACCATAAGCGATGGCAGCAGCGGTT
>TU60336
CTTAAATGGAAAGTATTTAATGTCTTGCTGCACAGACGAGTCTCCCCATGTGCGGCCGATCAACCTCTTGGCATCAAAGACGGTGTTCTCGGGGTTAGAGGTCAGCTGGTTCTTCGCAGCATCTCCGATGAGACGCTCTCCTTCGGTGGTGAAGGCCACGTATGATGGAGTGATGCGGTTTCCCTGGTCATTAGCGATGATCTCCACACGGCCGTTCTTGAACACTCCAACACTGGAACAAACAG
>TU60340
GTTGAGTTCCTCAAACTTGGCGCGGGTCAGTGTCTCGGAGAAATCCTCACCCTCGAAGAAGGACTCGATCTCGATGCGTGCCTGATGCTGGGCAGACAGCGCTCTCTTGGCCTTCTCCACCTCACGACGCAGCTTCTGCACGGCGCGGTTGTCCTTACGCACGTCCTTTCCGGTCTTCTTCTTGTAGAGCTTGATGAAGTGCTCCATGACGCGCTGATCGAAGTCTTCCCCGCCGAGGTGAGTGTCTCCATTAGTGGCCACCACCTCGAAGACGCCGTTATCGATGGTCAACAGGGAAACGTCGAAGGTGCCGCCACCGAGATCAAACACCAGGATGTTCTTCTCACCGTCTTTCTTATCCAGACCATAAGCGATGGCAGCAGCGGTT

Function

symbol description
hspa5 Predicted to enable several functions, including ATP binding activity; ATP hydrolysis activity; and misfolded protein binding activity. Acts upstream of or within response to hypoxia and response to yeast. Located in extracellular region. Is expressed in several structures, including central nervous system; digestive system; immature eye; prechordal plate; and sensory system. Human ortholog(s) of this gene implicated in dopamine beta-hydroxylase deficiency. Orthologous to human HSPA5 (heat shock protein family A (Hsp70) member 5).

NR:

description
78 kDa glucose-regulated protein precursor

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU60335 True 388 TUCP 0.56 2 30819515 30826358
TU60336 False 245 lncRNA 0.52 2 30817732 30825296
TU60340 False 388 TUCP 0.56 2 30819515 30826358

Neighbor

gene id symbol gene type direction distance location
LOC122344907 NA coding downstream 47825 30765631 ~ 30769907 (-)
golga2 golga2,LOC107658391 coding downstream 62792 30734104 ~ 30754940 (-)
ciz1a ciz1a,LOC107687257,LOC107571633,LOC107740230,LOC107689607 coding downstream 145636 30660119 ~ 30672096 (-)
surf2 surf2,LOC107740795,LOC107581206,LOC107743090 coding downstream 161775 30653163 ~ 30655957 (-)
surf4 surf4,LOC107740232,LOC107689610,LOC105890423,LOC103376134 coding downstream 165422 30646286 ~ 30652310 (-)
rabepk rabepk,LOC107743065,LOC107579283 coding upstream 4831 30831189 ~ 30835734 (-)
LOC122344688 LOC107743064,LOC107698017,LOC107734413 coding upstream 94459 30920817 ~ 30941882 (-)
cux2a NA coding upstream 116156 30942514 ~ 30951488 (-)
mcc mcc,LOC106565572 coding upstream 152235 30978593 ~ 31052589 (-)
rcl1 rcl1,LOC107701854,LOC107655287 coding upstream 227566 31053924 ~ 31064355 (-)
G40739 NA non-coding downstream 45708 30770714 ~ 30772024 (-)
G40708 dnm1,LOC107568151,LOC107658356 non-coding downstream 92506 30720192 ~ 30725226 (-)
LOC122345983 NA non-coding downstream 107054 30708773 ~ 30710678 (-)
G40701 NA non-coding downstream 227092 30590197 ~ 30590640 (-)
G40698 NA non-coding downstream 247632 30567251 ~ 30570100 (-)
G40762 NA non-coding upstream 39885 30866243 ~ 30919600 (-)
G40760 LOC108429729,LOC107563441 non-coding upstream 94493 30920851 ~ 30925197 (-)
LOC122344700 LOC108429729,LOC107563441 non-coding upstream 94820 30921178 ~ 30925197 (-)
LOC122344701 NA non-coding upstream 133086 30959444 ~ 30963507 (-)
LOC122344702 NA non-coding upstream 147960 30974318 ~ 30974883 (-)
G40713 lzts3,LOC107567954,LOC107687254,LOC107574519,LOC795227,LOC107665914 other downstream 25013 30789633 ~ 30792719 (-)
G40711 NA other downstream 84372 30631028 ~ 30733360 (-)
fubp3 fubp3,LOC107689604,LOC107687236,LOC106566971 other downstream 204591 30590843 ~ 30613141 (-)
rnf170 rnf170,LOC107721034,LOC107687247 other downstream 724156 30087966 ~ 30093576 (-)
LOC122344966 LOC107749532,LOC107566852,LOC107742171,LOC107565644,LOC107690083 other downstream 889057 29924702 ~ 29928675 (-)
LOC122344987 LOC107591496,LOC107663763,LOC107725109,LOC107734348,LOC107563429,LOC107654309 other upstream 504991 31331349 ~ 31350449 (-)
apooa apoo other upstream 876095 31702453 ~ 31711737 (-)
G41035 LOC107734367,LOC107665727,LOC107725151,LOC107591476,LOC107654325,LOC563292 other upstream 894912 31721270 ~ 31722906 (-)
tnca zmp:0000000846,LOC107715542,LOC107557573,LOC107591511,LOC102306937,LOC107725145 other upstream 1287538 32113896 ~ 32174064 (-)
LOC122346090 LOC107704013,LOC107725152,LOC107748063,LOC107654332,LOC107557589,LOC107594564 other upstream 1387673 32214031 ~ 32293782 (-)

Expression


Co-expression Network