LOC122344627 (LOC107560223,LOC107711009,LOC107681213)


Basic Information

Item Value
gene id LOC122344627
gene name LOC107560223,LOC107711009,LOC107681213
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 8992183 ~ 8997534 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238146.1
TATCCAACATAAGGACATGCATGGGCTTTATAATTCAGTCCAGTTTGTGGAGAAACAGCAGCTGTCTGGAAAGGTTCCTCAAACAAGACCATGGAAACAAACATCATATATTTGTGGTTTTGTGCTTTTGCATTAGTTCATGGAAATCAAGAGACTTCACCACAACCTCCCATCAGTGATAAACTCCCATCATTAATAAAGATGAACAATGATTTTGCTTTTGACCTGTACAAGAGGCTTGTAGAAATGCCAGAGTATCGGTCCAAGAACATCTTCTTCTCTCCCCTCAGCATATCCATGGCCCTTTCTGAGCTGTCTTTAGGAGCCGGTGGAGAAACCAAAGAGCAGCTTCTCAGCGGCATCGGCTATAACAGCTCGGTCTTCAGCACTGAAGAAATGCACCAGATGTTCCACAGTCTCCTGGAAGAAATCGACCAGAGGACGGGGGTGGACATCGATGTTGGCACTGCTGTATATGCAAGCGACAAATCAAAGCTCCTTCCTGAGTTCTTGAAGGAGATAAAGGAGTTTTACCACTCTGATGGCTTCACTGTGGATTTCAGCATCAAAGAAACACTGGATAAAATTAACACATATGTGAGGAAAAGACACGGGAAAATAGAACAAGCTGTTGATGATCTGGAATCTGACACTTTGATGTTTCTTCTcacttacatatattttaaagGAAAATGGGACATGCCATTTAACCCAAGCAAGACCCGACAGAGTACATTTCATGTGGACGCTGAAACCACCGTTCCAGTACAAATGATGCACCAGTATGAATCCCTCAAAGTTTATTATGATGTGGAACTCACAACTAAAGTCCTCTGTCTAGACTACAACGACTCTTTCTCCATGTTTCTGGCTGTACCAGACAATCATAGGCCTGCTAAGACCATCAAAGATCTGGAGATGGCCATCTCTAGACAGCACATTGAAAAGTGGAGGGGAGCTGTCAGAAAAAGaaaAACTGATATCTTTGTCCCCAAGCTCTCTCTGAAGACATCATATTCcctgaaagatattttgaaaggaATGGGAATGGCTGATATGTTTACAGATAAAGCCAACTTCACAAGGATTTCAgaggaaaaaatgctaatttcaaAGGTTTTGCATAAGGCCACTCTGGATATAGATGAGAAAGGAaccacagcagcagcagtgacAACTGTTGAATTCGGACCAATGTCCTACAGCCCACTGGACACTTTGAGTTTTGACCGTCCATTCATGATGTTTATCACTgaccaaaaaaatgacaacatccTCTTCTTTGGAAAAGTTGTCAATCCGGTGGAAAAACAACAGAGATACTCAaaaaaaagtaaacagattaaaggttgttttatgatcaaatataaGGACATGCATGGGCTTTATAATTTAGTCCAGTTTAGGGAAAGACAAATGTCAGAAGTCTGGAAAGGTTCCTCAAACAAGACCATGGAAAGGAACATCATATATTTGTGGTTTTGTGCTTTTGCATTAGTTCATGGAAATCAAGAGACTTCACCACAACCTCCCATCAGTGATAAACTCCCATCATTAATAAAGATGAACAATGATTTTGCTTTTGACCTGTACAAGAGGCTTGTAGAAATGCAGTATCGGTCCAAGAACATCTTCTTCTCTCCCCTCAGCATATCCATGGCCCTTTCTGAGCTGTCTTTAGGAGCCGGTGGAGAAACCAAAGAGCAGCTTCTCAGCGGCATCGGCTATAACAGCTCGGTCTTCAGCACTGAAGAAATGCACCAGATGTTCCACAGTCTCCTGGAAGAAATCGACCAGAGGACGGAGGTGGACATCGATGTCGGCACTGCTGTATATGCAAGCGACAAATCAAAGCTCCTTCCTGAGTTCTTGAAGGAGATAAAGGAGTTTTACCACTCTGATGGCTTCACTGTGGATTTCAGCATCAAAGAAACACTGGATAAAATTAACACATATGTGAAGGAAAAGACACACGGGAAAATAGAACAAGCTGTTGATGATCTGGAATCTGACACTTTGATGTTTCTTCTcacttacatatattttaaagGAAAATGGGACATGCCATTTAACCCAAGCAAGACCCATCAGAGTACATTTCATGTGGACGCTGAAACCACCGTTCCAGTACAAATGATGCACCAGTTTGAATCCCTCAAAGTTTATTATGATGTGGAACTCACAACTAAAGTCCTCTGTCTAGACTACAACGACTCTTTCTCCATGTTTCTGGCTGTACCAGACAATCATAGGCCTGCTAAGACCATCAAAGATCTGGAGATGGCCATCTCTAGACAGCACATTGAAAAGTGGAGGGGAGCTGTCAGAGAAAGaaaAACTGATATCTTTGTCCCCAAGCTCTCTCTGAAGACATCATATTCcctgaaagatattttgaaaggaATGGGAATGGCTGATATGTTTACATATAAAGCCAACTTCACAAGGATTTCAgaggaaaaaatgctaatttcaaAGGTTTTGCATAAGGCCACTCTGGATATAGATGAGAAAGGAaccacagcagcagcagtgacAACAGTTGAATTCGGACCAATGTCCTACAGCCCACTGGACACTTTGAGTTTTGACCGTCCATTCATGATGTTTATCACTgaccaaaaaaatgacaacatccTCTTCTTTGGAAAAGTTGTCAATCCGGTGGAAAAACAGTAATGTGACATTTAAGATGTCAGGACAACATTAGCCAGAAGATGGCCAtgatttaaaaactgttgtgctgTTTTATTGCTGACTCTACAGTTTGCATGTTTGATGTAGAACAGATGTACACAGTCTTTCTTCTAGAGGTTCACCTTCCTCCTGAGTTTAGTTCTAATGCATATCAAACACCAGGGCCATCTTATTAATGTCTTTTGATATAGATGACCTGCAGGACTGACAAGCAGGCTTTGCTAGATCTCTGCCGAATTATATAAAAGTTgtaaaaagttgtaaaaaacaGACCTATGTCTTGCATGAATTTCCCCcaactgtgtgagtgtgtgtgttcaaccCAAAAAGttcaacccaaaatgaaaattaattactcaccctcatgttgttccaaacccgtaaagaCGTAATTTATcgtcagaacacaaatgaagatttgttttctaaaattaCCCGTGAACGTAACAGGCGTTCACAGATACTTAGGGGGAAAGTGCACATGTGTTGTAATGCAGATGATGTAACTCATGGTGaaaagaatggttgagtaaataataTTAGTTCTGTTTTCTCGTAGCGTCATATACATGTAATTAAGTTCCAATACAAAATTGAAACAATACTCAAAATTTGCTTTTGAGATGGATATCACGGTAAATAAGTCCTGGCGTATTGTCCAGAGAAGAAAACTGTAGAGAGTTTCAGGTAACTGTcacatatttttcaatataagaaataaaatctaatttccGAA

Function

NR:

description
PREDICTED: corticosteroid-binding globulin-like

GO:

id name namespace
GO:0030162 regulation of proteolysis biological_process
GO:0010951 negative regulation of endopeptidase activity biological_process
GO:0005615 extracellular space cellular_component
GO:0004867 serine-type endopeptidase inhibitor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238146.1 True 3433 mRNA 0.40 13 8992183 8997534

Neighbor

gene id symbol gene type direction distance location
stxbp1b stxbp1b,LOC107560235,LOC107587321,LOC107690675,LOC107715760,LOC108423604,LOC108255382,LOC107681214 coding downstream 42805 8938254 ~ 8949378 (-)
dpp7 dpp7,LOC107709692,LOC107560239 coding downstream 115685 8871280 ~ 8876498 (-)
tsc1a LOC107709700,LOC107597815,LOC107681228,LOC107690665 coding downstream 348393 8632895 ~ 8643790 (-)
ak8 ak8,LOC107681224 coding downstream 360857 8611512 ~ 8631326 (-)
ddx31 ddx31,LOC107597806,LOC107741444,LOC107587329,LOC107690663 coding downstream 382907 8594064 ~ 8609276 (-)
LOC122345801 NA coding upstream 1957 8999491 ~ 9001555 (-)
trafd1 trafd1,LOC107709840,LOC107681252,LOC107560230,LOC107587319,LOC107715758 coding upstream 4373 9001907 ~ 9008032 (-)
LOC122345922 LOC107560213,LOC107709824,LOC107560217,LOC107709823,LOC107560218,LOC107681212,LOC107715747,LOC107715746 coding upstream 25018 9022552 ~ 9023686 (-)
nsmfb LOC107709845,LOC107560226,LOC107587468,LOC107715753,LOC107681255 coding upstream 139887 9137421 ~ 9165718 (-)
LOC122345763 LOC107560213,LOC107560217,LOC107709824,LOC107709823,LOC107560218,LOC107681212,LOC107715747,LOC107715746 coding upstream 168361 9165895 ~ 9168059 (-)
G34607 NA non-coding downstream 870 8991101 ~ 8991313 (-)
G34606 NA non-coding downstream 1160 8988611 ~ 8991023 (-)
G34583 NA non-coding downstream 58044 8933911 ~ 8934139 (-)
G34582 NA non-coding downstream 59103 8932860 ~ 8933080 (-)
G34579 NA non-coding downstream 64767 8927213 ~ 8927416 (-)
G34594 NA non-coding upstream 15772 9013306 ~ 9060814 (-)
G34704 NA non-coding upstream 249386 9246920 ~ 9248041 (-)
G34869 NA non-coding upstream 766539 9764073 ~ 9764532 (-)
G34871 NA non-coding upstream 768734 9766268 ~ 9766607 (-)
G34877 NA non-coding upstream 780099 9777633 ~ 9778238 (-)
G34580 LOC107681240,LOC107709820,LOC107560234,LOC107715750 other downstream 62130 8929470 ~ 8930053 (-)
LOC122345093 NA other downstream 314465 8674229 ~ 8677718 (-)
timm8b timm8b,LOC107717885,LOC107598437 other downstream 560597 8429700 ~ 8431586 (-)
G34372 zbtb44,LOC107597664,LOC107717865,LOC107677410,LOC107587334,LOC107722796 other downstream 577377 8411882 ~ 8414806 (-)
si:ch211-117m20.4 si:ch211-117m20.4,LOC107663429,LOC107597540,LOC107717881,LOC107677428,LOC107677427 other downstream 828157 8160877 ~ 8164026 (-)
vamp5 LOC107594989,LOC107681225 other upstream 217964 9215498 ~ 9220528 (-)
G34789 vps37b,LOC107594993,LOC107673398,LOC107656485,LOC107587312,LOC107709855,LOC107721558 other upstream 340294 9337828 ~ 9402623 (-)
si:dkey-96l17.6 si:dkey-96l17.6,LOC107672751,LOC107738297,LOC107592400,LOC107744487,LOC108434467,LOC105902719 other upstream 1327425 10324959 ~ 10335343 (-)
G35122 NA other upstream 1463674 10461208 ~ 10461709 (-)
G35371 znf703,LOC107599934,LOC107672788,LOC107744445,LOC107687685,LOC107726392,LOC107592299 other upstream 1870830 10868364 ~ 10874064 (-)

Expression


Co-expression Network