galnt9 (galnt9,LOC107600134,LOC107702212,LOC107719314,LOC103023100,LOC107570788,LOC108412666)


Basic Information

Item Value
gene id galnt9
gene name galnt9,LOC107600134,LOC107702212,LOC107719314,LOC103023100,LOC107570788,LOC108412666
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 4487841 ~ 4557844 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238165.1
GAGCAGCGCGTGAAAAGCGGGATGAGAGGGAGGGAGCATGCGGGGAGCGCGAGAGAAGAACGCTGCCATGCAAAGCGTCGCCTGACGGCGTCTTTTTTCCGCTTCCACCTGCGTCCGTCGCGCGCGGATCGTGGATTTCATCTGAAATCGCGTCCCACTTCGATGCGCGAGCGCGACGCGTCTTTGCTTTTGAGTCCCGCGAAGGATGCCGCGCGCGGAGGATCGCTGCCTGACATGcgctgacatttaaaaatgagccTTCTGAACTGTGCACAGCTCGTGCTCCTCGACTCCTGAGTGCACGGCGTGATTAAAcgcgtgctttttttttttaaatcggaGCGTAATCTGCTCCGACACATTTCTAAACGTTTGCTATGGGGGTCAGCGCAGGAACCCGAGGCGGCGGGATTTGATTGCAATCTCAGCGAACGCGTTTTCGCTTATGTATCGCGTGTGCATCGTCGTTTGTGCCCGCTGATCAGCTGTTAGGCTTGAGAAACTGCGGCTCGCGCGGGTTGTCGTGCGCGGTGCTGAAAGGACAGCTCCCTCCACGGCGGATCGCATGGATCAATATTAGGGGTCTGACAGTGTCGCTCTCGGGCTTTAATGGCTGTGGCACGCAAGATCAAAACTCTGCTGACGGTCAACATTCTGGTGTTCGTCGGGATCATCTTGTTCTCCGTCTACTGCAGGATCCAGGACCGATCCGAAGAGCTCGTGCAGATCGGGAGGCTCTCGGATCAGAGACTGCGAGGCAGGAATGCCAAAGTTACGAACTCCATGGACAGACAGTCCATTCTCAAAAGGCTCGAGCGACTAGAAGATGTGGTCTATAACCAGTTAAATGGTCTAGCCAAGCCCATGGGTCTGGTGGAGGGTCCTGGAGGTCTGGGACAGGGCGGTGCGGCGGCCACGCTGGGAGAAGACAGCCGAGAGAGCGAGGGAAGGTACGAGGAGTACGGCTACAACGCCCAGCTGAGTGACCGCATCTCCCTGGACAGGAACATTCCGGACTACAGACCCAAAAAGTGTAAGCAGCTGACCTACCCTGATGACCTTCCTCAGATCTCTGTCGTCTTCATCTTTGTGAATGAAGCTCTGTCTGTGATCCTGCGGTCTGTACACAGCGTGGTCAACCATACCCCGGCACACCTGCTCAAAGAAATCATACTGGTGGACGACAACAGTGACAGTGTGGAGCTGAAGTTCAATCTGGATCATTACGTGAACAAGCGATATCCCGGCCTGGTGAAGATCGTGAGGAACAGTAAGCGAGAGGGACTCATACGGGCCAGGATTCACGGCTGGAACGCTGCCACCGCTCCTGTTGTGGGCTTCTTTGACGCCCACGTGGAGTTCAACACAGGCTGGGCTGATCCTATCCTCACCAGAGTGAAAGAAGATCACACCAGGATAATCCTCCCCGCGATAGATAATATCAAGTACAACACCTTTGAGGTGCAGCAATACGCTAATGCAGCTCACGGCTATAACTGGGGCCTCTGGTGCATGTACATCATCCCACCGCAGGATTGGCTGGACAGAGGCGATGAGACTGCCCCCATCAGGACACCTGCGATGATCGGCTGCTCCTTTGTGGTGGATCGCGAGTATTTTGGGGAAATCGGACTGCTCGACCCCGGCATGGAGGTTTACGGAGGAGAAAACATCGAACTCGGCATGAGGGTGTGGCAGTGCGGAGGCAGCATGGAGGTTCTCCCGTGTGCTCGAGTGGCTCACATCGAACGCACAAAGAAACCGTACAACAACGACATCGACTACTACGCCAAGCGGAACGCTCTGCGGGCAGCAGAAGTTTGGATGGATGAGTTTAAGTCCCACGTTTACATGGCCTGGAACATCCCCATGAATAACCCGGGAGTGGATTTTGGAGACGTGTCAGAGCGAGTAGCACTGAGGAAGAAAATGAACTGCAGGAACTTTCGCTGGTACCTTGAGCATGTCTATCCCGAGATGAGGATTTACAATAACACCATCACTTATGGAGAGGTGCGAAACAGTAAAGCCAGCGGATACTGCCTTGATCAGGGGTCAGAGGAGGACGACAGGGCTATTCTCTACCCATGTCACGGCATGTCATCACAGCTGGCGAGGTACACCACCGAGGGCTTATTGCAGTTAGGACCCCTAGGGTCGACCACGTTTCTGCCTGACACAAAATGCCTGGTGGATGATGGAAGAGGAAGGACTCCGAGCTTGAAAAAATGCGATGCCATCACCAGGTCCTCCCAGAGGCTCTGGGATTTTACTCAGaatggACCTATTATAAGTCGAGACACAGGACGTTGTTTGGAGGTTGAAATGTCAAAAGATGCGAACTTTGGCCTGCGGCTGGTCGTCCAGCGCTGCTCGGGGCAGAAGTGGATGATTCGAAACTGGATAAAACACCCCAGACACTGAGGAACGTCCATAGCTGAAGAATCACCTCCCCGAGCTGGAGAGCAGCCATAGACACAAACCCCTGAGACAGATGAGAAGAACCCTCTTTCGGGGTGAAACGCTTTCAATATAGACGTCTGAAGGTGATATATTGTCTTTGGACGCATTTACTGTTGAGTGAGCAGATGAAGCAGAAGTCCTCTGTACAGGCTCCCAGTTTCCCGCAGCGGACTCGCGTTTCCCGAGTGGGTTCTGATGAGCCGTCTCGGTGAAATATCAAGAGAAATATTCAAAAGAGTTGCggataaacagagagagaggaagcgaAAAGTTGCAAACCCCTCTGAGCAAAGTCTCGAGTTTTACTTCTTATCGATTGCCATATCAACACTCGTTTCTTCAGGCTGTGAATTGCTTTGGATAACCCGAATATCAACTTTAAACGTTCAGTGGGTATCCCAAGTGCTACACAAcaacaagggaaaaaaaagaaagtagtgTAGACTTTAATCTGACACAATAGTTtcagctctttttctttctttggtttACAGACTTAATTGCTAATGCACAACAAAACCATGTGTTCAGTCAAGAACTCATGTGCCTTTCTCCATCTTTATGCCATCAGACCAGGGAATGTTCCTCCCTAAGCATgtacaaatatttgattttaaattaattaaaatatgaatataatgttAAGGTCTTATTGTAGAAACACGTTGTAAAATACTCAAAACATGATAATCCAGGAAGATCGAAACAATAAAAActagttttcttttcttttgta
>XM_043238166.1
TGAGCAGCGCGTGAAAAGCGGGATGAGAGGGAGGGAGCATGCGGGGAGCGCGAGAGAAGAACGCTGCCATGCAAAGCGTCGCCTGACGGCGTCTTTTTTCCGCTTCCACCTGCGTCCGTCGCGCGCGGATCGTGGATTTCATCTGAAATCGCGTCCCACTTCGATGCGCGAGCGCGACGCGTCTTTGCTTTTGAGTCCCGCGAAGGATGCCGCGCGCGGAGGATCGCTGCCTGACATGcgctgacatttaaaaatgagccTTCTGAACTGTGCACAGCTCGTGCTCCTCGACTCCTGAGTGCACGGCGTGATTAAAcgcgtgctttttttttttaaatcggaGCGTAATCTGCTCCGACACATTTCTAAACGTTTGCTATGGGGGTCAGCGCAGGAACCCGAGGCGGCGGGATTTGATTGCAATCTCAGCGAACGCGTTTTCGCTTATGTATCGCGTGTGCATCGTCGTTTGTGCCCGCTGATCAGCTGTTAGGCTTGAGAAACTGCGGCTCGCGCGGGTTGTCGTGCGCGGTGCTGAAAGGACAGCTCCCTCCACGGCGGATCGCATGGATCAATATTAGGGGTCTGACAGTGTCGCTCTCGGGCTTTAATGGCTGTGGCACGCAAGATCAAAACTCTGCTGACGGTCAACATTCTGGTGTTCGTCGGGATCATCTTGTTCTCCGTCTACTGCAGGATCCAGGACCGATCCGAAGAGCTCGTGCAGATCGGGAGGCTCTCGGATCAGAGACTGCGAGGCAGGAATGCCAAAGTTACGAACTCCATGGACAGACAGTCCATTCTCAAAAGGCTCGAGCGACTAGAAGATGTGGTCTATAACCAGTTAAATGGTCTAGCCAAGCCCATGGGTCTGGTGGAGGGTCCTGGAGGTCTGGGACAGGGCGGTGCGGCGGCCACGCTGGGAGAAGACAGCCGAGAGAGCGAGGGAAGGTACGAGGAGTACGGCTACAACGCCCAGCTGAGTGACCGCATCTCCCTGGACAGGAACATTCCGGACTACAGACCCAAAAAGTGTAAGCAGCTGACCTACCCTGATGACCTTCCTCAGATCTCTGTCGTCTTCATCTTTGTGAATGAAGCTCTGTCTGTGATCCTGCGGTCTGTACACAGCGTGGTCAACCATACCCCGGCACACCTGCTCAAAGAAATCATACTGGTGGACGACAACAGTGACAGTGTGGAGCTGAAGTTCAATCTGGATCATTACGTGAACAAGCGATATCCCGGCCTGGTGAAGATCGTGAGGAACAGTAAGCGAGAGGGACTCATACGGGCCAGGATTCACGGCTGGAACGCTGCCACCGCTCCTGTTGTGGGCTTCTTTGACGCCCACGTGGAGTTCAACACAGGCTGGACACCTGCGATGATCGGCTGCTCCTTTGTGGTGGATCGCGAGTATTTTGGGGAAATCGGACTGCTCGACCCCGGCATGGAGGTTTACGGAGGAGAAAACATCGAACTCGGCATGAGGGTGTGGCAGTGCGGAGGCAGCATGGAGGTTCTCCCGTGTGCTCGAGTGGCTCACATCGAACGCACAAAGAAACCGTACAACAACGACATCGACTACTACGCCAAGCGGAACGCTCTGCGGGCAGCAGAAGTTTGGATGGATGAGTTTAAGTCCCACGTTTACATGGCCTGGAACATCCCCATGAATAACCCGGGAGTGGATTTTGGAGACGTGTCAGAGCGAGTAGCACTGAGGAAGAAAATGAACTGCAGGAACTTTCGCTGGTACCTTGAGCATGTCTATCCCGAGATGAGGATTTACAATAACACCATCACTTATGGAGAGGTGCGAAACAGTAAAGCCAGCGGATACTGCCTTGATCAGGGGTCAGAGGAGGACGACAGGGCTATTCTCTACCCATGTCACGGCATGTCATCACAGCTGGCGAGGTACACCACCGAGGGCTTATTGCAGTTAGGACCCCTAGGGTCGACCACGTTTCTGCCTGACACAAAATGCCTGGTGGATGATGGAAGAGGAAGGACTCCGAGCTTGAAAAAATGCGATGCCATCACCAGGTCCTCCCAGAGGCTCTGGGATTTTACTCAGaatggACCTATTATAAGTCGAGACACAGGACGTTGTTTGGAGGTTGAAATGTCAAAAGATGCGAACTTTGGCCTGCGGCTGGTCGTCCAGCGCTGCTCGGGGCAGAAGTGGATGATTCGAAACTGGATAAAACACCCCAGACACTGAGGAACGTCCATAGCTGAAGAATCACCTCCCCGAGCTGGAGAGCAGCCATAGACACAAACCCCTGAGACAGATGAGAAGAACCCTCTTTCGGGGTGAAACGCTTTCAATATAGACGTCTGAAGGTGATATATTGTCTTTGGACGCATTTACTGTTGAGTGAGCAGATGAAGCAGAAGTCCTCTGTACAGGCTCCCAGTTTCCCGCAGCGGACTCGCGTTTCCCGAGTGGGTTCTGATGAGCCGTCTCGGTGAAATATCAAGAGAAATATTCAAAAGAGTTGCggataaacagagagagaggaagcgaAAAGTTGCAAACCCCTCTGAGCAAAGTCTCGAGTTTTACTTCTTATCGATTGCCATATCAACACTCGTTTCTTCAGGCTGTGAATTGCTTTGGATAACCCGAATATCAACTTTAAACGTTCAGTGGGTATCCCAAGTGCTACACAAcaacaagggaaaaaaaagaaagtagtgTAGACTTTAATCTGACACAATAGTTtcagctctttttctttctttggtttACAGACTTAATTGCTAATGCACAACAAAACCATGTGTTCAGTCAAGAACTCATGTGCCTTTCTCCATCTTTATGCCATCAGACCAGGGAATGTTCCTCCCTAAGCATgtacaaatatttgattttaaattaattaaaatatgaatataatgttAAGGTCTTATTGTAGAAACACGTTGTAAAATACTCAAAACATGATAATCCAGGAAGATCGAAACAATAAAAActagttttcttttcttttgta
>XM_043238167.1
ATCTGTGAAAGGACGGAGACGGGGAGGATAGCGGGACTTACCTCCGTAAGATGACATGCCAAGTCAAGCACGGTGGCTGATAGAGATCCGTTTGCTCAGCAAACCGTCCGTGACTGCGCACGGGGTGCAGCGCTTTATTGTTTCGGCTAAGAGTATAAGTGATTTATGATGTACCCCATGGACTTCAGTCAAGGGCTGATCCTATCCTCACCAGAGTGAAAGAAGATCACACCAGGATAATCCTCCCCGCGATAGATAATATCAAGTACAACACCTTTGAGGTGCAGCAATACGCTAATGCAGCTCACGGCTATAACTGGGGCCTCTGGTGCATGTACATCATCCCACCGCAGGATTGGCTGGACAGAGGCGATGAGACTGCCCCCATCAGGACACCTGCGATGATCGGCTGCTCCTTTGTGGTGGATCGCGAGTATTTTGGGGAAATCGGACTGCTCGACCCCGGCATGGAGGTTTACGGAGGAGAAAACATCGAACTCGGCATGAGGGTGTGGCAGTGCGGAGGCAGCATGGAGGTTCTCCCGTGTGCTCGAGTGGCTCACATCGAACGCACAAAGAAACCGTACAACAACGACATCGACTACTACGCCAAGCGGAACGCTCTGCGGGCAGCAGAAGTTTGGATGGATGAGTTTAAGTCCCACGTTTACATGGCCTGGAACATCCCCATGAATAACCCGGGAGTGGATTTTGGAGACGTGTCAGAGCGAGTAGCACTGAGGAAGAAAATGAACTGCAGGAACTTTCGCTGGTACCTTGAGCATGTCTATCCCGAGATGAGGATTTACAATAACACCATCACTTATGGAGAGGTGCGAAACAGTAAAGCCAGCGGATACTGCCTTGATCAGGGGTCAGAGGAGGACGACAGGGCTATTCTCTACCCATGTCACGGCATGTCATCACAGCTGGCGAGGTACACCACCGAGGGCTTATTGCAGTTAGGACCCCTAGGGTCGACCACGTTTCTGCCTGACACAAAATGCCTGGTGGATGATGGAAGAGGAAGGACTCCGAGCTTGAAAAAATGCGATGCCATCACCAGGTCCTCCCAGAGGCTCTGGGATTTTACTCAGaatggACCTATTATAAGTCGAGACACAGGACGTTGTTTGGAGGTTGAAATGTCAAAAGATGCGAACTTTGGCCTGCGGCTGGTCGTCCAGCGCTGCTCGGGGCAGAAGTGGATGATTCGAAACTGGATAAAACACCCCAGACACTGAGGAACGTCCATAGCTGAAGAATCACCTCCCCGAGCTGGAGAGCAGCCATAGACACAAACCCCTGAGACAGATGAGAAGAACCCTCTTTCGGGGTGAAACGCTTTCAATATAGACGTCTGAAGGTGATATATTGTCTTTGGACGCATTTACTGTTGAGTGAGCAGATGAAGCAGAAGTCCTCTGTACAGGCTCCCAGTTTCCCGCAGCGGACTCGCGTTTCCCGAGTGGGTTCTGATGAGCCGTCTCGGTGAAATATCAAGAGAAATATTCAAAAGAGTTGCggataaacagagagagaggaagcgaAAAGTTGCAAACCCCTCTGAGCAAAGTCTCGAGTTTTACTTCTTATCGATTGCCATATCAACACTCGTTTCTTCAGGCTGTGAATTGCTTTGGATAACCCGAATATCAACTTTAAACGTTCAGTGGGTATCCCAAGTGCTACACAAcaacaagggaaaaaaaagaaagtagtgTAGACTTTAATCTGACACAATAGTTtcagctctttttctttctttggtttACAGACTTAATTGCTAATGCACAACAAAACCATGTGTTCAGTCAAGAACTCATGTGCCTTTCTCCATCTTTATGCCATCAGACCAGGGAATGTTCCTCCCTAAGCATgtacaaatatttgattttaaattaattaaaatatgaatataatgttAAGGTCTTATTGTAGAAACACGTTGTAAAATACTCAAAACATGATAATCCAGGAAGATCGAAACAATAAAAActagttttcttttcttttgta

Function

symbol description
galnt9 Predicted to enable carbohydrate binding activity and hexosyltransferase activity. Predicted to be involved in protein glycosylation. Predicted to be located in Golgi membrane. Predicted to be integral component of membrane. Predicted to be active in Golgi apparatus. Is expressed in hindbrain; midbrain; and telencephalon. Orthologous to human GALNT9 (polypeptide N-acetylgalactosaminyltransferase 9).

NR:

description
PREDICTED: polypeptide N-acetylgalactosaminyltransferase 9

GO:

id name namespace
GO:0006486 protein glycosylation biological_process
GO:0005794 Golgi apparatus cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0016757 transferase activity, transferring glycosyl groups molecular_function

KEGG:

id description
K00710 GALNT; polypeptide N-acetylgalactosaminyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238165.1 True 3199 mRNA 0.51 11 4487841 4557843
XM_043238166.1 False 3002 mRNA 0.51 10 4487841 4557844
XM_043238167.1 False 2019 mRNA 0.48 8 4487841 4522834

Neighbor

gene id symbol gene type direction distance location
atad1a atad1a,LOC107702218,LOC107561272,LOC107656802,LOC107719316,LOC103469725 coding downstream 25424 4456819 ~ 4462417 (-)
LOC122346182 NA coding downstream 117363 4350227 ~ 4370478 (-)
LOC122345409 htr7c,LOC107561270,LOC107707833,LOC107656814,LOC107560967,LOC102292089 coding downstream 168106 4287799 ~ 4319735 (-)
LOC122345410 hspb8,LOC107720866,LOC107561261 coding downstream 345938 4137531 ~ 4141903 (-)
slc39a14 slc39a14,LOC107656812,LOC107560970,LOC107561269,LOC107702220,LOC107707824 coding downstream 613952 3849493 ~ 3873889 (-)
si:dkey-112e17.1 LOC107656819,LOC107548941,LOC107741260,LOC107672633,LOC107707820,LOC107600127 coding upstream 369483 4927327 ~ 4947953 (-)
zdhhc8b zdhhc8b,LOC107600124,LOC107672609,LOC107707819,LOC107741283,LOC107548914 coding upstream 391240 4949084 ~ 5001056 (-)
rnf215 rnf215,LOC107707831,LOC107656805,LOC107741259,LOC107672611,LOC107548928,LOC107600132 coding upstream 450242 5008086 ~ 5013941 (-)
si:dkey-215k6.1 si:dkey-215k6.1,LOC107684990,LOC107741256,LOC107672621,LOC107707847,LOC107548916,LOC107600130 coding upstream 611868 5169712 ~ 5333504 (-)
aacs aacs,LOC107672615,LOC108255473,LOC107684991 coding upstream 793602 5351446 ~ 5380269 (-)
G33109 NA non-coding downstream 389468 3607467 ~ 4098373 (-)
LOC122345411 NA non-coding downstream 436369 4050782 ~ 4051472 (-)
LOC122345413 NA non-coding downstream 518877 3967856 ~ 3968964 (-)
G33140 htr7c,LOC107755817,LOC107707833,LOC107656814,LOC107561270,LOC107702213,LOC107560967 non-coding downstream 583295 3898591 ~ 3904546 (-)
G33124 NA non-coding downstream 834953 3648466 ~ 3652888 (-)
G33300 NA non-coding upstream 302155 4859999 ~ 4902402 (-)
G33310 NA non-coding upstream 356037 4913881 ~ 4915751 (-)
G33330 NA non-coding upstream 467101 5024945 ~ 5027815 (-)
G33332 NA non-coding upstream 474719 5032563 ~ 5033954 (-)
G33333 NA non-coding upstream 476267 5034111 ~ 5053903 (-)
LOC122346168 srrm4,LOC107720865,LOC107702227,LOC107561260,LOC107656798 other downstream 294760 4144856 ~ 4193081 (-)
piwil2 piwil2,LOC107560971,LOC107707823,LOC107702219 other downstream 589263 3878650 ~ 3898578 (-)
coq5 coq5,LOC107560969,LOC107707852,LOC107656810,LOC107561264,LOC107702223,LOC107707851,LOC107560965,LOC101158254,LOC107755815,LOC107561265 other downstream 735077 3744675 ~ 3752764 (-)
LOC122344624 LOC107699921,LOC107708239,LOC107755860,LOC107697241,LOC107551809 other downstream 1475022 2935743 ~ 3012819 (-)
G33175 NA other upstream 64646 4622490 ~ 4623058 (-)
G33758 LOC107596916,LOC107710760,LOC107700938,LOC107587412,LOC107693817 other upstream 2266327 6824171 ~ 6826182 (-)
usp20 usp20,LOC107691016,LOC107693839,LOC107710745 other upstream 2365002 6922846 ~ 6943203 (-)
G33998 LOC108444092 other upstream 2824502 7382346 ~ 7397153 (-)
LOC122345606 LOC107712378 other upstream 3149126 7706970 ~ 7711824 (-)

Expression


Co-expression Network