isg15 (LOC107654605,LOC107597356,LOC107741227,LOC107595933)


Basic Information

Item Value
gene id isg15
gene name LOC107654605,LOC107597356,LOC107741227,LOC107595933
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 12831666 ~ 12832738 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238172.1
ACGAAACATTGTTTTGAGGCGGGGCTTGAGCCGTCGCTGTATATATTAGTGCAGCCAGAAGCACATTATTTGATTTCGGTGAGACTTACTGAAGAAAACATCCAACAAAAGCCACATTCGGCAAAGCATTAACTACCAGCCAGACGATGGAGCTGACAATAAGACTGCTGAGCGGAGCTGTGAAGCAACTGGAAGTACACGGTAATACCACGGTTGGCGAACTCAAGAAGCTCATTTCTCAGCACTTCGGAGAGCCCCCCTGCAAACAGAAGCTGTCCGCCGATAACGGTTCTCGCATCAGCCTCGATGATGATTCTAGAACCCTCGGCAGCTACGGACTGCACTCTGGATCAGTGGTCAGTCTGCTCATCACCAACCCCGGACCTTTCCAAGTGTTCGTCAGGAACGAGAAGGGCCAGACCGGAACGTATGATGTTGATGTCAATGAGACCGTAGCTCAACTCCAGGAAAAGATCTACCGCAAAGAGAGAGTCCCCGTGGATCAGCAGAGACTGGTTTTCAACGGAAGACAGCTGGAGTCTGGTAGAAAGCTGCAGGAATACGACATCGCCTCAGGAAGCACCATTCACATGACTCTCCGTCTGCGAGGAGGCTGATCGCTTAAATGTGTGcaaaaagaactttttttttttttttttttttataatgccttCAGAACTAATTTAATTCCAATGTATTTACCTGCAGATGTCTTCAGGTGTCCTTTTTacacttactattataataacagtaaattctGCGTTGTTACATGCAagacaaactttaaaaataaccctagccatatagtaagtacattaAATTTACTCTTAAATGTAGTTTCACTGTAACAAGgacgccttaaaataaagtgtaaccatatGCATATCTCGTCTGAATTCCATTGTTTTTATCTGCATTTTATGTAACTGTATCTTTTATCTGCTACAATAAATGTTCTAATCATTCCCAAAAA

Function

NR:

description
PREDICTED: polyubiquitin-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238172.1 True 973 mRNA 0.43 2 12831666 12832738

Neighbor

gene id symbol gene type direction distance location
svopa svop,svopa,LOC107696058 coding downstream 11988 12808510 ~ 12819678 (-)
ssh1a ssh1,LOC107727158,LOC107597277 coding downstream 37563 12762580 ~ 12794103 (-)
coro1ca coro1c,coro1ca,LOC107741221,LOC107696062,LOC107595940,LOC106584990 coding downstream 75516 12716051 ~ 12756150 (-)
selplg NA coding downstream 117135 12712197 ~ 12714531 (-)
tmem119a tmem119,tmem119a,LOC107597281,LOC107727157,LOC107741302,LOC107696065 coding downstream 119612 12708388 ~ 12712054 (-)
ptcd2 ptcd2,LOC107718650,LOC107700924,LOC107655927,LOC107757526 coding upstream 3218 12835956 ~ 12840936 (-)
map1b map1b,LOC107596172,LOC107655889,LOC107757527,LOC107597920 coding upstream 11513 12844251 ~ 12863698 (-)
ttc33 ttc33,LOC107596169,LOC107757511,LOC107655901 coding upstream 61846 12894584 ~ 12911763 (-)
eda2r LOC107598184 coding upstream 110587 12943325 ~ 12954845 (-)
ophn1 ophn1,LOC107700916,LOC107596712,LOC107596162,LOC107655920,LOC107757505 coding upstream 187608 13020346 ~ 13050778 (-)
G35966 wscd2,LOC107597274,LOC107743343,LOC107696066,LOC107595945 non-coding downstream 192289 12637190 ~ 12639377 (-)
LOC122345380 NA non-coding downstream 224728 12602216 ~ 12606938 (-)
G35949 NA non-coding downstream 293864 12532390 ~ 12537802 (-)
G35928 NA non-coding downstream 316116 12463906 ~ 12515550 (-)
G35923 NA non-coding downstream 380901 12448214 ~ 12450765 (-)
LOC122345905 NA non-coding upstream 47323 12880061 ~ 12884157 (-)
G36004 fbp1b,LOC107718665,LOC107655925,LOC107596168,LOC107757529,LOC107596723 non-coding upstream 80888 12913626 ~ 12916814 (-)
G36009 NA non-coding upstream 92005 12924743 ~ 12926462 (-)
G36012 NA non-coding upstream 100733 12933471 ~ 12933779 (-)
G36048 NA non-coding upstream 222831 13055569 ~ 13056705 (-)
G35936 NA other downstream 325708 12501914 ~ 12505958 (-)
G35825 tenm1,LOC107557119,LOC107713050,LOC107597323,LOC107741271 other downstream 511981 12317803 ~ 12319685 (-)
sh2d1aa sh2d1aa,LOC107713049,LOC107741293,LOC107663232,LOC107557102 other downstream 662256 12165403 ~ 12169410 (-)
msna msna,msn,moes,LOC107746233,LOC107597256,LOC107672695,LOC107663223,LOC107741191 other downstream 1015722 11795656 ~ 11815944 (-)
G35554 LOC100304549,LOC100219516,LOC106514001,LOC103353280 other downstream 1179039 11583780 ~ 11652627 (-)
G36047 NA other upstream 221106 13053844 ~ 13054857 (-)
h3f3c h3f3b,H3F3A,LOC101073377,LOC105909691,LOC107388308,LOC105888650 other upstream 746323 13579061 ~ 13582290 (-)
lrch2 lrch2,LOC107700248,LOC107746375,LOC107710563 other upstream 821556 13654294 ~ 13699226 (-)
G36298 NA other upstream 884386 13717124 ~ 13718543 (-)
G36336 NA other upstream 985004 13817742 ~ 13818942 (-)

Expression


Co-expression Network