gnb1l (gnb1l,LOC107708243,LOC107755863,LOC107551810)


Basic Information

Item Value
gene id gnb1l
gene name gnb1l,LOC107708243,LOC107755863,LOC107551810
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 3343559 ~ 3376526 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238173.1
TCCAGTCTGTTTACAGTAATTAAGTTGTCTAGCTCGTGATTTATGATGCATTGAGAAAGAGGTTTtgcagagaagaaagaaagacgaggaaaaaaatgacatgagcaCGTCTGACTTTCGCCCGAAGGCTTTCggtgtttttctgtgttatcTAAGAGATATCGGTGTTTACATACGGGTTGATGCTAATAATTACGTGAAAGTTGTGTAAATAAATTCCTCCGGTGCTGGTGGGCCATTAAATTATTCctttccattgtttttgaatgtcaGGATTTTCAATTTCGCATAATCCTTTACAAACGATGTTGATTTGCAACGCTAAAAGAACGCTGTGTGTTCGTAGAAGCGGTGAAACATTATTCAGGATGTCTGCATGCATCCCTAAATGTATCGTGAATGACTTAAATGAACCTGCGTGAACACGGATTCGGATGCCGGCTGAGCGGTTGCTGTAGTGATGTCCCGTCCTCCTCCAGCCCCGCTCTTTATTCTGAGGGGTTCAGGAGCCGCCGTCAACAGCCTGAGCTTCTGCTGCGCTGGAGACGGACCTCCGCGTCTCTACTCGGGGTCGGGTAAGGGTGCGATCCACCTGTGGAACCTGAGCACCAGGAGAGCGGAGAGGGTTCTAGAGAGCCATGCTGGGAACTCTGTTATCTGGCTCCGCTCTTTCAGAGACAGCAGAAGCAGATTGATCAGtcaGGGTCGGGACATGCGCCTGTGCGTGTGGGATCTGTCTGAAGACCGCAGCGCAGTGACCGACTCTCTCCTGACCGCCAGCGTGGGCTTCTGTCAGTGCTCTCTGCTGGAGACCGGACCGGGAGCCGCTCTTCTGGCTCACCCCACAGAACACACGGAGGAGGTGAGCGTGGTGGAGATGAGGAGCTGGACTCCTGTGTGCTCCCTGAAACCTGATTCAAAGCTGGGCATGCTCATGTGTATGAAGATGTGGCAGGCAGGTTCCGGTCCGGTTCTGTGTGCCGGCTACGAGGACGGCTCTCTGGTGCTGTGGGACGTTTCCCATCGCCGTCCCTACGGCCGTCTGAAGGCACATGCTGAGCCGGTCATGTGTCTAGACGTTGATGTGTCCCAGCAGAAAGGCGTCTCGGGGTCTTCAGAGAAGATCCTCCGGTCCTGGACGCTCGACAAGCAGCACAGCCTTCAGATGCACGACTCTGTTCAGATGACCAATCCCGGGGTCTCTCAGCTGTGTATCCGTGCCGATGGAAAGATCCTGGCAGCGGCGGGATGGGACGACAGCATCCGAGTGTTCGGCTGGAAGAAGCTGAAGCCACTGGCTGTTCTGCAACATCACACTGACATGGTGAATAGTGTGGCCTTCTCAGACCATCAGGACCCCCCACAGAGACTTTTGGCCGCGGGGTCCAAGGACCAGCGGATCAGTGTGTGGTCTATATATAGCCAAAGCTGAGTTTGAAAGACAGAGGCCCGCTTTACCGTTTCCTTCAAACTGATTGTTGCAAATTAATCTGACTTTATTTACATACTTGAACGTGGTgctaatatattttctttgagtGAAAGGGCCTGAATCAGTCAGAGGCGGAGCTACAACATTGCAttgcagttttatatataatcgCTTGCGgtattgctgtcaaacaattaatcactattaaaaaagatatatatataaatacaaaata
>XM_043238174.1
CTGCGGGTCCTATCAGTCCCGCCGTCGCGTGTTTTGGTTTCGTCCGTCGCACGCGGGATTCTGCAGTTCGTACAGGATTCGGATGCCGGCTGAGCGGTTGCTGTAGTGATGTCCCGTCCTCCTCCAGCCCCGCTCTTTATTCTGAGGGGTTCAGGAGCCGCCGTCAACAGCCTGAGCTTCTGCTGCGCTGGAGACGGACCTCCGCGTCTCTACTCGGGGTCGGGTAAGGGTGCGATCCACCTGTGGAACCTGAGCACCAGGAGAGCGGAGAGGGTTCTAGAGAGCCATGCTGGGAACTCTGTTATCTGGCTCCGCTCTTTCAGAGACAGCAGAAGCAGATTGATCAGtcaGGGTCGGGACATGCGCCTGTGCGTGTGGGATCTGTCTGAAGACCGCAGCGCAGTGACCGACTCTCTCCTGACCGCCAGCGTGGGCTTCTGTCAGTGCTCTCTGCTGGAGACCGGACCGGGAGCCGCTCTTCTGGCTCACCCCACAGAACACACGGAGGAGGTGAGCGTGGTGGAGATGAGGAGCTGGACTCCTGTGTGCTCCCTGAAACCTGATTCAAAGCTGGGCATGCTCATGTGTATGAAGATGTGGCAGGCAGGTTCCGGTCCGGTTCTGTGTGCCGGCTACGAGGACGGCTCTCTGGTGCTGTGGGACGTTTCCCATCGCCGTCCCTACGGCCGTCTGAAGGCACATGCTGAGCCGGTCATGTGTCTAGACGTTGATGTGTCCCAGCAGAAAGGCGTCTCGGGGTCTTCAGAGAAGATCCTCCGGTCCTGGACGCTCGACAAGCAGCACAGCCTTCAGATGCACGACTCTGTTCAGATGACCAATCCCGGGGTCTCTCAGCTGTGTATCCGTGCCGATGGAAAGATCCTGGCAGCGGCGGGATGGGACGACAGCATCCGAGTGTTCGGCTGGAAGAAGCTGAAGCCACTGGCTGTTCTGCAACATCACACTGACATGGTGAATAGTGTGGCCTTCTCAGACCATCAGGACCCCCCACAGAGACTTTTGGCCGCGGGGTCCAAGGACCAGCGGATCAGTGTGTGGTCTATATATAGCCAAAGCTGAGTTTGAAAGACAGAGGCCCGCTTTACCGTTTCCTTCAAACTGATTGTTGCAAATTAATCTGACTTTATTTACATACTTGAACGTGGTgctaatatattttctttgagtGAAAGGGCCTGAATCAGTCAGAGGCGGAGCTACAACATTGCAttgcagttttatatataatcgCTTGCGgtattgctgtcaaacaattaatcactattaaaaaagatatatatataaatacaaaat

Function

symbol description
gnb1l Orthologous to human GNB1L (G protein subunit beta 1 like).

NR:

description
guanine nucleotide-binding protein subunit beta-like protein 1

GO: NA

KEGG:

id description
K24732 GNB1L; guanine nucleotide-binding protein subunit beta-like protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238173.1 True 1667 mRNA 0.50 7 3343559 3368707
XM_043238174.1 False 1314 mRNA 0.55 7 3343560 3376526

Neighbor

gene id symbol gene type direction distance location
LOC122345463 sema4c,LOC107699920,LOC107697240 coding downstream 254037 3022849 ~ 3089522 (-)
kat6a kat6a,LOC107708249,LOC107697242,LOC107755858,LOC107699914,LOC107551817 coding downstream 433177 2876309 ~ 2910382 (-)
ap3m2 ap3m2,LOC107755857,LOC107551816 coding downstream 468666 2866165 ~ 2874893 (-)
tet3 LOC107654213,LOC107708251,LOC107557386,LOC107697244,LOC107551814,LOC107755856 coding downstream 477516 2824171 ~ 2866043 (-)
LOC122345702 figla coding downstream 733974 2607214 ~ 2609585 (-)
txnrd2.2 txnrd2 coding upstream 14468 3390994 ~ 3417741 (-)
taok3a taok3,taok3a,LOC107699916,LOC107697236,LOC107708246 coding upstream 46358 3422884 ~ 3494193 (-)
si:dkey-1k23.3 LOC107560961,LOC107656799,LOC107702214,LOC107755870 coding upstream 242652 3619178 ~ 3622404 (-)
xbp1 xbp1 coding upstream 283178 3659704 ~ 3662910 (-)
kremen1 kremen1,LOC107656811,LOC107561268,LOC107560966,LOC107702222 coding upstream 377453 3753979 ~ 3809696 (-)
G32998 NA non-coding downstream 319 3340599 ~ 3343240 (-)
G32999 NA non-coding downstream 16318 3293606 ~ 3327241 (-)
G32922 NA non-coding downstream 167310 3175719 ~ 3176249 (-)
G32914 NA non-coding downstream 223188 3080907 ~ 3120371 (-)
G32910 NA non-coding downstream 358576 2982767 ~ 2984983 (-)
G33008 NA non-coding upstream 11758 3388284 ~ 3390379 (-)
G33109 NA non-coding upstream 230941 3607467 ~ 4098373 (-)
G33114 NA non-coding upstream 241411 3617937 ~ 3619054 (-)
G33124 NA non-coding upstream 271940 3648466 ~ 3652888 (-)
G33140 htr7c,LOC107755817,LOC107707833,LOC107656814,LOC107561270,LOC107702213,LOC107560967 non-coding upstream 522065 3898591 ~ 3904546 (-)
LOC122344624 LOC107699921,LOC107708239,LOC107755860,LOC107697241,LOC107551809 other downstream 330740 2935743 ~ 3012819 (-)
G32908 sema4c,LOC107697240,LOC107708238,LOC107699920 other downstream 383382 2951462 ~ 2960177 (-)
add2 add2,LOC107668755 other downstream 737642 2586587 ~ 2605917 (-)
snrnp27 snrnp27 other downstream 758107 2580548 ~ 2585452 (-)
G32857 NA other downstream 789413 2496504 ~ 2554146 (-)
coq5 coq5,LOC107560969,LOC107707852,LOC107656810,LOC107561264,LOC107702223,LOC107707851,LOC107560965,LOC101158254,LOC107755815,LOC107561265 other upstream 368149 3744675 ~ 3752764 (-)
piwil2 piwil2,LOC107560971,LOC107707823,LOC107702219 other upstream 502124 3878650 ~ 3898578 (-)
LOC122346168 srrm4,LOC107720865,LOC107702227,LOC107561260,LOC107656798 other upstream 768330 4144856 ~ 4193081 (-)
G33175 NA other upstream 1245964 4622490 ~ 4623058 (-)
G33758 LOC107596916,LOC107710760,LOC107700938,LOC107587412,LOC107693817 other upstream 3447645 6824171 ~ 6826182 (-)

Expression


Co-expression Network