LOC122344671 (LOC107755842,LOC107599645,LOC107599132)


Basic Information

Item Value
gene id LOC122344671
gene name LOC107755842,LOC107599645,LOC107599132
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 1743315 ~ 1745171 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238200.1
CAAAGCCTCCTGCCTCTCGCTGCACTCGTCACCTGCGTTTCTCCAGCATGCAACAGATACAGATTCTTGGACTCCTGAGCGTTTTTCTGCTGGTCTTAAACCCCAGCCAGTGCAGCCCAATCATGGCGCAGTGTGTGGAGCACACCTACTGCTCCTCCACGCTGAAAGAGTACCACACACAGCTCATCAACCTGCCCAGCAGGATCAACGAACGCAGCGTCGCCGCATGGAGCTACGAGGAGAAAGTGGACCTGGACCGCGTGCCGCAGATCATCTACGAAGCAAACTGCCTGAACAGTCATTCCTGCAAGGGGGTGGACAGCTCCTTCAGTCTGGAGAGCATCCCCATTGCAATCAAAATGCCATTTCTCCGGAAAAACCCAAGATGCCCAACTTACGCGCTGGAATTCGAGGATGTCAATATCGCCTGTATATGTGCTACATCCAGACAGAATTAGCACTGGGTCTAACAGTTCATGCACTGGATTCAATTTCAATGATTATAATAGCGCCACTTAATTTTAATGTCATCTGCGAAGAAGTCAACTGAATGGTAATGCTTATTATATTAAACGAACAACAACACAATGCATCCGCTGCCTTGAGTTGCCAAATGCTtgtaaatgtgattaaataaaCTAGTTTTgtaacaaaagctttttatctCAGATGTTTCCTGCTTGCTTAAAGAGCCCTGAAGTGACTATTCAACATACTCCATA

Function

NR:

description
PREDICTED: interleukin-17A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238200.1 True 722 mRNA 0.47 3 1743315 1745171

Neighbor

gene id symbol gene type direction distance location
ppil2 ppil2 coding upstream 90899 1623097 ~ 1652416 (+)
gal3st1a gal3st1,gal3st1a,LOC107741514,LOC107653284,LOC107755837,LOC107668734 coding upstream 120988 1616062 ~ 1622327 (+)
pes pes1,pes,LOC107704970 coding upstream 130767 1603813 ~ 1612548 (+)
pole pole,LOC107704563,LOC107668756 coding upstream 145587 1579923 ~ 1597728 (+)
si:dkey-98f17.5 si:dkey-98f17.5,LOC107755832,LOC107599615,LOC107668759,LOC107704964,LOC108431725,LOC108255717,LOC107599159,LOC106580116 coding upstream 200931 1530761 ~ 1542384 (+)
ydjc LOC107741491,LOC107704612,LOC107599608,LOC107755843,LOC107668745,LOC107599128 coding downstream 28794 1773965 ~ 1779426 (+)
ccl19a.1 LOC107704652,LOC107741512 coding downstream 49363 1794534 ~ 1796438 (+)
tctn2 LOC107704714,LOC107741513,LOC107599155 coding downstream 51663 1796834 ~ 1806041 (+)
sec14l8 sec14l8,LOC107741494,LOC107599607,LOC107668747,LOC107704732,LOC107755846,LOC107599126,LOC108431737,LOC108255515 coding downstream 61779 1806950 ~ 1820557 (+)
LOC122346045 ddr2l,LOC107704361,LOC107550294,LOC107725118,LOC107667359,LOC107723312 coding downstream 106436 1851607 ~ 1864706 (+)
G32513 mapk1,LOC107386038 non-coding upstream 36428 1705974 ~ 1706887 (+)
LOC122345819 NA non-coding upstream 45641 1690109 ~ 1697674 (+)
G32504 NA non-coding upstream 68959 1673029 ~ 1674356 (+)
G32499 NA non-coding upstream 89416 1653433 ~ 1653899 (+)
G32443 NA non-coding upstream 167045 1544752 ~ 1576270 (+)
G32538 NA non-coding downstream 14823 1759994 ~ 1760230 (+)
G32539 NA non-coding downstream 16393 1761564 ~ 1761971 (+)
G32540 NA non-coding downstream 16834 1762005 ~ 1762282 (+)
LOC122346170 NA non-coding downstream 17750 1762921 ~ 1765407 (+)
G32542 NA non-coding downstream 21425 1766596 ~ 1766890 (+)
selenoe fep15,LOC107667262,LOC107566481,LOC107750764,LOC108443918,LOC101066385,LOC105931211,LOC100703742 other upstream 627910 1112264 ~ 1115405 (+)
G32277 NA other upstream 686162 1055193 ~ 1057153 (+)
tal2 tal2,LOC107594599,LOC107725114,LOC107723303,LOC107667406 other upstream 1291950 450168 ~ 451365 (+)
LOC122346012 cunh9orf84,LOC107704297 other upstream 1295829 432779 ~ 447486 (+)
susd1 susd1,LOC107594557,LOC107704917,LOC107572260,LOC107667560 other upstream 1311850 419242 ~ 431465 (+)
ccl19a.2 ccl19a.2,LOC107704660,LOC107755825,LOC107599642,LOC107668736,LOC107599131,LOC107741495 other downstream 46657 1791828 ~ 1793266 (+)
G32611 prrc2b,LOC107704672 other downstream 77483 1822654 ~ 1826114 (+)
G32620 prrc2b,LOC107704672,LOC107562325 other downstream 89977 1835148 ~ 1843013 (+)
LOC122346050 nutf2,LOC107726276,LOC107692933,LOC107733565 other downstream 155456 1900627 ~ 1905499 (+)
LOC122345711 LOC107556260,LOC107714787,LOC107691117,LOC107551460,LOC107715220,LOC107690391,LOC565819 other downstream 265046 2010217 ~ 2019150 (+)

Expression


Co-expression Network