LOC122344672 (LOC107599169,LOC100329495,LOC107704423,LOC107750761,LOC107667614,LOC108443917,LOC102231850,LOC103134964,LOC102295583)


Basic Information

Item Value
gene id LOC122344672
gene name LOC107599169,LOC100329495,LOC107704423,LOC107750761,LOC107667614,LOC108443917,LOC102231850,LOC103134964,LOC102295583
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 1145529 ~ 1175274 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238201.1
GCCGAACGCAAGAACGCGCCCTGTATAAACGCCTCCCAACACCTGCGGTGGGAAATACCTTGTGGAGAGCAGCAGCTCACACTCAGACTAAATATAGATCCATCGCGAGGGAACCCGGACACCGTGCCTCCCCACGCGCAGCACAGCTCGTTTATCTGCACGTTGTGATTAGCTGGAAAGTTTGATCATATCGGCGATACCttcctgtttttttaaacataagaTTTTTTGGACAACTGGATTTCTTTCTTACATTATCCTTCAACTACAACTAAAGCGCATTTTTAACTCGTTGTTTTTGGCAGCGCGCACACGCTGTCCAACAAGTGCGTGCTCGAGGCTCAACTGCTGCGTCTTAAGAAGCGATCGAGGAGAACACAGCCGTATGGAGATCACCGTCTAACGACCCGGAGATCGAATCGATCCACGCAACCCCCGCCAAACACGCACATACTTTGTCGCATTGATAAAAATGCGCGTTTGTTTGACGCGCGTCGTGTGAGCTGGTGGATTATGTGGATCCGCTAGTTTCCCCGCCGATGGAGCCGCCGTAATTCGCTGTCTTTCTCATTTTTACAACAAACTCAAGAGCTGGCGGTTTTCTTACATCGTGAAGATCCGAACCCGAAAGCCTTACATCTAGACCACCAGTGACCTGTGAAGACTTGTGAATTCCTGCACCTGGTTTCTTGGAGAGGGCTGCGCAATTGCGCACGCTGCGAGAGTACTATCGGACCTTTCCATGGAAATCCACTCCACGCGTGATCTCCAGTGAGGGTTTCAGTCCGATCTGATGTGGGGTAAAAAGTTGCCGTCTGGACAGTAAATCTCATATATGAGGATCCATACACACGTGCTGGTCAATATAAATCGCAAAAATGCCTATGCATCCGGTGACTTCCACTTTGATGTACCGGGGGATCTGCACCATCCCTGATATCCTGTCGTACCGAGCACCGGTCAACCTGCCTGAAGATGAGGTGGAAGAAATCCGGGAGGCGTTTAAGGTGTTTGATCGAGATGGGAACGGCTTCATCTCAAAGCAGGAGCTTGGCATGGCCATGCGCTCTCTAGGGTACATGCCCAATGAGGTCGAGCTGGAGGTCATCATTCAGAGACTCGACATGGATGGTGACGGCCAGGTGGATTTTGAGGAATTCGTTACCCTCCTGGGGCCCAAACTCTCAGCTGCTGGGATGCCTGACAAGTTCAACGGAACCAATTTTGATTCTGTGTTCTGGAAGTGTGATATGCAGAAGCTGACTGTGGAAGAGCTGAAGAGACTCTTGTATGACACCTTCTGTGACCACCTGACTATGAAGGACATCGAGAATATCATCATGACAGAGGAGAATCACATCGAAAATCCGGAGGACTGCCAGGTTGACATTGACACGGAAAGTCCGACCCAGCAGGTGAAGCAAACATGCGTACGGAAGAGTCTGATCTGCGCCTTCGCGATCGCTTTCATCATCAGCGTCATGCTTATCGCAGCCAATCAGGTGCTCCGCAGTGGCATGAAGTAACCGAATGGACCATCCTCAGCTCAGATTCAGTTCAACACATAACAGTgacaaaaattgcaaaaaaaaaaaaaaaaactaacaaaacaaaaaaaaaaaaacatgcacacacaaactggAGCAGCTGAGTTCGTTTTATTAACCTGAAATCCAAATGTTAtgactgaaatatttttgagaCGAGCTATAGCTTCCACTGGagataattattcatatttgacAGCAAATGTAATGCACTCAGATATATAAACGCACACATACTGTGTCTTACCCAGAAAAGGTCTGATAAAAGTACacgaaaagagagaaagaagacgTTTATGCTGTAAAGGACTTTTAAAATGTCCCCTTCAAccgctctctctccctcttcggTATGTTTTGGGTGAGTTTAGCCGCATGGACATCTCCAACCGAGGATCCTACTCTTCAATGCATGACGATGCATGGATTTACAATAGCCTGGATGTACCAGTAGAGCTCAGCTGTGCATCCATTCACCTATATATTAGACCCCAAAACAAATTTTCCGAAGAAAGACCCATCTTACACGTACGAAGAGTTGGATATGCAGCGGAGGCCGTTTCTGACGTCTTTTACATCCAATATACTGATCCCTTTGCATGATAATAAGGGCTGTTTAGGGCATGCTCATGTCATGCAACGTTAGTCTTGTGTTTGTCGAGTAACTATTGTTGGTTTTTACCTTGTTGCACATGCCTGAGATGATTGTAGTAGTTCTCCATATGGCCAAAGGGGGCATGAAACAACCCAAAAGCGATACTATACCACTAGTGACATACCTGTAAAgtattaaaggaatagatcaCCCAAGATTGAAATCTGATCAACTTCAGGTTGATTGCAACACTTGCTCACCAAAAGATctactgcagtgaatgggtgccgtcggaatgaaaCTCCAAGAAGCTGATTAAAACGTCACAGtgatccacaagtaatccacaccactcacGTCCAGTCCATCTATTAACATCTTGTAAAGCAAAAACCTGCTTCACAATCCGTAATATTATTTTCTCTCAAGTTGTCTTGTCTAAATCAGGAGAGCAGCATGCACGGATCGAGCACAGTGTATAAGTGAAGTCCAAAACTTATAAACAAATTTGATTTTGTAGTGAGAGGAAAACCAGGCATGGATTTTTCCCCGTATAAAGCACCTTTGAACTCATATTTTGGCCTGAAATTACAGTTTTCAAGTTAAAAGGTCTTAATTatgggtttgtttcttacaaacatgcagcattTCACTTCACGAAACATGAATGGATGGATCGGAGTCATTCAGGGGTTTTTTTGGTGGATATTGTGATCCTTTATCAGttatttggactctttttctgatggcacccattcattgaCGAGCAAGTGATATAACACTACATTTCTCCGAAGAAGAAACAAGCGAATTTAGTTTTTGGGTGCGCTATTTCTTTAAGCGTTTTACAGTACACGGATTAAAGCGATTTTCTTTTCACCTGAAATACTCTATGCATTTTCAGGCTAACCGTTTGAACGATCAACAGCGCTCGACGGTGCAAATGCAACTGTTACATTTTGCGAACATTTGCACTGTAGTTATCACGCGGAGTTGATAATTAGGAGCTTTTGAATCGAAACGACGCGACCGGCATGAAATGATACCAAATGATTACGCTGACGACGCATTCTAAAAGGAGCATTTGTTTTCTGAACGCATCAGGAAACGATTCAGTGGTTGTTTTTGAACCAAATCGATGTCCATTTAAGCTTATCGCCAAACCTAAATGGATGATCATGATGTTTTTCTTCGTAGTAAGGAATATGTGTATTAATATAACCTGAGAGCAAACACTGTGGCATATCAGTGTTTCACTGCTGTTTTCGAAATATATTGTTCACATGTCCACATGAATGTGCCATTTGTGACATCCTTCAGTGTTTTCCTGGGAAATATAGTAGTTGTGTGCAGGTCGACATGATGATAGCGAAAAGAGTATCTTAGGTGCgaataatgtttcaaaaatgaatgTCAGGGTTTGAATATGTATCAGCTGTAAGTGTGTCATTCTGTTGAAGGGCATTTTCCAGGGTATAACATTAGTTTTCAACTCTGCCCAGGGCCTGAATTGATTTAGCCGTTAGTTACAGCACCATGAAACTCTTATATTTGGATGTCCAGgtataaatgaaatatgcaatGGATGGAAACACCTGTctcagcgcgcacacacacgagTACTACGATCGAGTGACGCTCAAAGAGGAGTCACAGGACAACAATGTACAGGTTTCCCCCATTACACAGGCACGATAACTCGTTCATTAATAGAAACGCGGAAAGCTAATAACGTTCCTGAGCCGCGAGCGAAATATTATCGCTTGAAATAGCATATTATCTTTGACCAGAGAATGGCTGTTATTCAAAACCCATCCAGAATAGGAATACCTGATAAGGAAATTCTCATTATATCATTACCGGATTGGCTGGTAACCCCGTCTGCCCCAGAGTTTTATTTGTGCTCGGTAAATCAGATCCAGCTGAATTAATTATTCACAATagctgcttattaaaaaaaaaaaaaaaaaaaatcaagaaaagcAAAGCCGTGTTGAAGGCTAAAGATCTATTTTTACTTGCTCTAACCCTTGAAAATGCTTTTGCTGGTATAACCAGTTATAATGAGATTTAATAGATCTTTAGTaatgaatttaatgcaaaatgcaagTTAATAATGTAAGGTTGGaggtttaatatattattaaattaaagtaaattttcACCATGAGTTAAGTTACTTCATGCATGTTACCAGTTACCTTAattttaactttcattttaatttaattgataaataaatttttttaaccatgaatacatttttagcttaaaaaaTGCCCAGTTTAAcaaggtttattattattattatttttcacccAGAATAAAACCTGATAATTTAAGGtttaaca

Function

NR:

description
PREDICTED: calcium-binding protein 7-like

GO: NA

KEGG:

id description
K23849 CABP7_8, CALN2_1; calcium-binding protein 7/8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238201.1 True 4493 mRNA 0.42 5 1145529 1175274

Neighbor

gene id symbol gene type direction distance location
prodhb prodhb,LOC107730849,LOC107704395,LOC103359847,LOC107566477 coding downstream 69752 1053144 ~ 1075777 (-)
rtn4r rtn4r,LOC107704387,LOC107599164,LOC107573425,LOC107728899,LOC107667279 coding downstream 176776 898109 ~ 968753 (-)
chek2 chek2,LOC107653214,LOC107667648,LOC107567453,LOC107550275 coding downstream 487336 650073 ~ 658193 (-)
LOC122346115 LOC107751416,LOC107579531,LOC107653145,LOC107550279,LOC107667655,LOC107723311 coding downstream 523015 616780 ~ 622514 (-)
tor4ab LOC107653139,LOC107751425,LOC107723309,LOC107550278,LOC107567459,LOC107667676 coding downstream 531702 606370 ~ 613827 (-)
nf2a nf2,nf2a,LOC107726729,LOC107599150,LOC108431713 coding upstream 49280 1224554 ~ 1256414 (-)
fbxw8 fbxw8,LOC107667234,LOC107599639,LOC107566479 coding upstream 96624 1271898 ~ 1287998 (-)
rnft2 rnft2,LOC107599619,LOC107704451,LOC107667191 coding upstream 116557 1291831 ~ 1307537 (-)
nipsnap1 nipsnap1,LOC107599167,LOC107653245,LOC107726724,LOC107599621,LOC107667606,LOC107755818 coding upstream 161889 1337163 ~ 1342053 (-)
nos1 nos1,LOC107599638,LOC107726721,LOC107668720 coding upstream 180085 1355359 ~ 1403124 (-)
G32292 NA non-coding downstream 93350 1051867 ~ 1052179 (-)
G32275 NA non-coding downstream 266387 877910 ~ 879142 (-)
LOC122344906 LOC107676118 non-coding downstream 322700 820190 ~ 822829 (-)
G32245 NA non-coding downstream 427119 718137 ~ 718410 (-)
G32239 NA non-coding downstream 440925 704234 ~ 704604 (-)
G32409 NA non-coding upstream 114004 1289278 ~ 1291763 (-)
G32440 NA non-coding upstream 337771 1513045 ~ 1513312 (-)
G32463 LOC107599159 non-coding upstream 362124 1537398 ~ 1539368 (-)
G32462 NA non-coding upstream 365952 1541226 ~ 1567149 (-)
G32486 pes,LOC107704970,LOC107741508 non-coding upstream 431151 1606425 ~ 1607747 (-)
wdr31 wdr31,si:ch73-266o15.4,LOC107653158,LOC107667323,LOC107751417 other downstream 514403 622514 ~ 631126 (-)
ddr2l ddr2l,LOC107704361,LOC107725118,LOC107550294,LOC107723312,LOC107667359,LOC108444179 other downstream 562434 556654 ~ 583095 (-)
kcnv2b atp5ib,atp5i,atp5ia,kcnv2b,LOC107703581,LOC107725101,LOC107704252,LOC107594594,LOC107723293 other downstream 757651 382052 ~ 387878 (-)
rictora rictora,LOC107704198,LOC107658248,LOC107567655,LOC107750288,LOC107594576,LOC107725140 other downstream 883858 239951 ~ 261671 (-)
G32104 LOC107725162,LOC107594575 other downstream 1109181 35777 ~ 36348 (-)
castor1 gatsl3,LOC107755828,LOC107726730,LOC107704487 other upstream 137330 1312604 ~ 1336187 (-)
lrrc74b lrrc74b,LOC107755819,LOC107667596,LOC107599620 other upstream 167332 1342606 ~ 1354414 (-)
ypel1 ypel1,YPEL1,ypelc,ypel2b,LOC103374080,LOC106586007 other upstream 497750 1673024 ~ 1694286 (-)
G32676 NA other upstream 791363 1966637 ~ 1967748 (-)
LOC122344636 pex11a,LOC107556261,LOC107714788,LOC107690406,LOC107691149,LOC107715221,LOC107551461 other upstream 844822 2020096 ~ 2022922 (-)

Expression


Co-expression Network