ciz1a (ciz1a,LOC107687257,LOC107571633,LOC107740230,LOC107689607)


Basic Information

Item Value
gene id ciz1a
gene name ciz1a,LOC107687257,LOC107571633,LOC107740230,LOC107689607
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 30660119 ~ 30672096 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238233.1
TCCGGTCCTGCAGGCGGCGCTGTGAGCTCCTCGCTGTGGTCGCGCTCAGACCGGTGAGAGTGTGTTAGCTTTAGCGCCGCTAACGTGACAGAGGAACTTTCAACAGGCTGTCGCTCGTTTCTCCGCTATTCAACTCATAACCCCGTCGGCAGAGTTCgctGCGGCGCAGCAGTGAATCTCTGGGACCGTCAGCATGTTTAACCctcaccagcagcagcagcagtttcATCAGCATCTGCGGCAGCTTCAACAGCTGTTCCAGCAGCAGACGCCGCCTCcgcctcctccacctcctcctccgccCCAGCCTCCGCCCGCTCATCACATCACACACGCACGgccgATGGCGGCTCCCGCTCCTCCGTCTCGAATGGTGAATCTGTGCTCGGCCACGCAGACCATCATCGCTCCTAACCCCATGCTGCAGGGGGCGCTGCTCATGCAGCAGATGCAGGCGGGCGGCATGCGAGGGTTTGCGATGGGAGGCCAGCAGTTCCCTCAGTTCTTCGCTGCGGGGTCCAGAGCGTCTCTTCTGGGGCCCGTCCCGATGGGAGTCGCCATCAAAACACCGCACATGGGATTCCCACGCCACTTCACGCCACACACACGCTACTTCACCAACGAGTTTCAGGCTCGTCAGCCGGACAGAAAGAGGGAAAACGAGCAGAAGTCAGCAGGCAGCAGCGACAGCCAATCGGAagccagcagcagcagagCTGAAGAGGCGTCCGCTCCGGCCGATCCGGGATGTCAGGGGTCTTCAGAGCAGCCCGACGAACCCGCCGccaagaaacacaaaacacaggaGTCAGAGGATCCTGTGGAGACGGAATCAGCTCAGAGCACTGAATACAAGAGCCCTGACCCCGCAGAGCTGAGTCTGCAGGACGGAGGTGGAGTGGACGGAGCGCTGGCCGCCGAAGCAGATGAGCCGAGTCAAGCGGCCGAGCAGGTTGAAAGCACCGAAGCTCTGGAGAAAGACGTGGAGCAACAGATGAGCGAGGGTCCAGACGACACCACGGGCTCCGACTCGCTCTCAGAGGTCAAGGAGAGTGCAGATGCTCCTGAAGAGGTCAAAGACGGCGCTGCAGAGACCTCCAGCAAGTTCTTCTGCTATATTTGCAACATCACTTGCCATAACCAGCAAAATTTCCAGAGCCATATGAACGGGCTGACGCACCAGCAGAAGATGATGGAGATCCAGCACATGAGCAACGCTTGTCTCGTCACGCTGCTGCCCCGCGTCCAGGAGTCCCTGCAAGGAGCTCGCCGAGACGGTGAGAAGAGGCCGGGTCTGCAGAGATGGTGCTCCACCTGTCAGACTCACTTCACCACCAACGTCATGGAACACCGCAGAACCAAGGAGCACAAGcgcTGTAGCCGTCCGTCCTCGTCCTGCACGGTGTGTAAGCTGCTCTTCAGGACACACAGAGAGTTTGTGGAGCACATGCAGTCGTCGGAGCACAAGCAGCGAGTCCAGCAGCTGTGGAAGGACTCGGATCACATCAACACCGACATGTTCCTGGGAGAAGAGGACGGAGAGGGCAGCGACGACgagagggaggaagaggagaacgggaagGAGGGCTTGGCCGCTCAGATGGAGGTGACTCTGGAGGATCTGACTGAAGACGAGGAGTTTGACTCAGACACAGTGTATGgctcCAGTTTCGTGGTGCCCGTGGCTGGTTTTCTCTGTCGTCTCTGTAATCAGTTCTATCACTTCGAGTCTTCGGCTCGACACACACACTGCAAGACGCTCAAACACTTCCAGAGTCTCAAGCGTTATAAAGCCTTAAAGAAGCACGAAGACTCCGGCTCGACCTCAGCAGAACCAGCAGACCCCATCAGTCCAGATCAGACCGCTCTCCCGCCAGAACCAGCCCCGCAGACCTGTACCTCACCTCCCGGCAGCCCGCAGGAAGTCCAGCCACCAGCACAGGAAGAAGCCGTTGCCGTGGAGCCGGGGCCCGGGCAGGAGCGCCCGGGGCGGGGCAGGACTCCTGCTAAGAGACGAGGACGAGGAGCGAGACGCCGCTGAGACGCGCAGAGGACCTGAGTGAAAGCACTCGTGCCACAGATCCAGCCTCTCACCTGTTTGTAGAGTCCTGAGCACGCGGCATGGGATACGCCGCAGGAGAGCGTGACCCTGAACGGGTCGCTTCCATCCAAACATGTTCAGCTCAGAGTTCAGCCCAAAACCAGCAGGATGTGTGTCCTTCAGACTCAGACTCTCATAGCCTCTTTCACctaatatatactgtgtgtgtatatatatatatatcagattaATGTGAGGTTTAGTTTACA

Function

symbol description
ciz1a Predicted to enable nucleic acid binding activity and zinc ion binding activity. Predicted to be active in nucleus. Orthologous to human CIZ1 (CDKN1A interacting zinc finger protein 1).

NR:

description
cip1-interacting zinc finger protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238233.1 True 2310 mRNA 0.59 18 30660119 30672096

Neighbor

gene id symbol gene type direction distance location
surf2 surf2,LOC107740795,LOC107581206,LOC107743090 coding downstream 4162 30653163 ~ 30655957 (-)
surf4 surf4,LOC107740232,LOC107689610,LOC105890423,LOC103376134 coding downstream 7809 30646286 ~ 30652310 (-)
ass1 ass1,LOC107740768,LOC107687233,LOC107689608 coding downstream 15372 30622204 ~ 30644747 (-)
LOC122344972 NA coding downstream 79791 30576288 ~ 30580328 (-)
LOC122344973 NA coding downstream 117679 30540497 ~ 30542440 (-)
golga2 golga2,LOC107658391 coding upstream 62008 30734104 ~ 30754940 (-)
LOC122344907 NA coding upstream 93535 30765631 ~ 30769907 (-)
rabepk rabepk,LOC107743065,LOC107579283 coding upstream 159093 30831189 ~ 30835734 (-)
LOC122344688 LOC107743064,LOC107698017,LOC107734413 coding upstream 248721 30920817 ~ 30941882 (-)
cux2a NA coding upstream 270418 30942514 ~ 30951488 (-)
G40701 NA non-coding downstream 69479 30590197 ~ 30590640 (-)
G40698 NA non-coding downstream 90019 30567251 ~ 30570100 (-)
G40672 NA non-coding downstream 93963 30565684 ~ 30566156 (-)
G40670 ythdc2 non-coding downstream 95742 30564117 ~ 30564377 (-)
G40684 NA non-coding downstream 141664 30516065 ~ 30518455 (-)
LOC122345983 NA non-coding upstream 36677 30708773 ~ 30710678 (-)
G40708 dnm1,LOC107568151,LOC107658356 non-coding upstream 48096 30720192 ~ 30725226 (-)
G40739 NA non-coding upstream 98618 30770714 ~ 30772024 (-)
G40751 hspa5,LOC107687227,LOC107567952 non-coding upstream 149029 30821125 ~ 30846878 (-)
G40762 NA non-coding upstream 194147 30866243 ~ 30919600 (-)
fubp3 fubp3,LOC107689604,LOC107687236,LOC106566971 other downstream 46978 30590843 ~ 30613141 (-)
rnf170 rnf170,LOC107721034,LOC107687247 other downstream 566543 30087966 ~ 30093576 (-)
LOC122344966 LOC107749532,LOC107566852,LOC107742171,LOC107565644,LOC107690083 other downstream 731444 29924702 ~ 29928675 (-)
eng LOC107562335,LOC107704777,LOC107741503 other downstream 1005058 29614719 ~ 29655061 (-)
G40182 brinp1,LOC107715673,LOC107674904 other downstream 1169915 29460585 ~ 29490204 (-)
G40713 lzts3,LOC107567954,LOC107687254,LOC107574519,LOC795227,LOC107665914 other upstream 117537 30789633 ~ 30792719 (-)
G40752 hspa5,LOC107686379,LOC107743071,LOC107687227,LOC107567952,LOC107734417,LOC107734415,LOC107686377 other upstream 145636 30817732 ~ 30826358 (-)
LOC122344987 LOC107591496,LOC107663763,LOC107725109,LOC107734348,LOC107563429,LOC107654309 other upstream 659253 31331349 ~ 31350449 (-)
apooa apoo other upstream 1030357 31702453 ~ 31711737 (-)
G41035 LOC107734367,LOC107665727,LOC107725151,LOC107591476,LOC107654325,LOC563292 other upstream 1049174 31721270 ~ 31722906 (-)

Expression


Co-expression Network