LOC122344691


Basic Information

Item Value
gene id LOC122344691
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 31074043 ~ 31081265 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238241.1
ATGATTTTGTTTCTGTCACCTGATGTCTGTGTTCAACATCTCCACCCATCACGGAGTAATAAAAGAGCATGGGAGACCACAGCTGCTGTAGCTACCGCTGGATCTCAGGATCTCATCGAGAGAAATGAGTGCATTCAACGTCCAGAAGAGCGGCGAGGTGAGAATCTCACACTCCCTTCATCCGAAAGAAAAGGAGTTTGTAGACAGAAGGAGAGACGCTGTGTTTCGAAGCCTGCAGGAACTCAACATCCACACCAGTCAGgatgaggatgaggtgCAGAACATAGCGTTACTGGCTTctggaggaggagaaagagccATGGTGGGTTTGCTGGAATGTCTGGTTCAGCTTGATAAAGCGGGTCTTCTGGACTGCATCCTTTATCTGAGCGGAGTCTCTGGATCCACCTGGTGCATGGCCTCCTTATACAAGGAACCAGACTGGTCCACCAAACTAGAGACAGTGAAAGACAACATCGTCAAGAGACTCAGTGGTCCTAAAGTCAGCTGGGGAGACGCATGTGAAAAACTGAAGAAATATCACAAAGAGAAAGAACTCTTCAGCTTGACTGACGTCTGGGCGGCGCTGGTCGTCACAGACTACGTGAAAGAGATCGATGAACAAACCCTCACAGAGGAGTGGGACCACTACAGTAAAGACCCGTTTCCCATCTACACAGCGATCGACAAGCAGTTCAAACAGCAAGGAGACGGAGACCCCTGGTTTGAGATCAGTCCGTATGAAGCGGGTTACTCCCTCACCGGAGCGTTCGTGGACACCTCCAGCTTCGGCAGCAAGTTTGAGAACGGCTCCAAGAATGAAATGGACATGCTGTACCTGCAAGGTCTGTGTAGCAGTGCTATAGCTGACGAAGAAGAGATCTATCAAATCATctgcatgaaaataaaagATTTCctccacattaaaaaaatgaagatgctTGAAGAAACAACGACAGATCTCAGCTCCTGGGAGGTGGAACAGTGTTTCCAGGTTCTCGTGGATCTTGTGGACGCGCATCTCTACGTTCGGATAGGAGAAGATCCCTCTGCTCTTCATCGATCCATCGCAAAAACACTGAACAATCTCGGTGGAGGCAAATATCAGAGTTTttcagatgaaaaaataaatctcaacGATAAACAAGCTGCAAAATTGTACATGAAGCAATACACTGAACACGTATTTAACAATTTGAGTCTGAATTTCACTTTCTGGCCTTTCGattttttcaaagacatttttaaatgtctgattCATTGGATCTGGGGCAGAAATTATAACTTTATCCATAACATGACAGATAAAACGGTGCCTCCCGATCTTCTGAAAAGTGAGACGAGAGACTATGAAGACGCCGGGCTGTTGCTGAACTCCCCGTACTTCTCCGTGCTGAGAGAAGAACGAAACATTGACCTCATCATTTCACTGGATTTCAGCGAAGGAGATCCTTTCTTGACGATCAAGGAAACAGCTGATATATGCAGTGCCCAGAAACCCAAGATCCCTTTCCCTGAAGTCCACATTCCCAGTAAAGAAGAGAAGAACCCGAAGGACTTCTACGTGTTCAAAGGCCCGAACGCTCCAACCGTGATCCACATCCCTCTGTTTAATGTGGTCAACTGTGGAGATGATCTTGAGGCTTGGAGGAACAAATATGGCACCTTCCAAGGTCCTTACAGCGCTGAGATGATCAAGGATCTTATGGAGGTCGCTGGAAAAAACATCTCTAACAACGTAGAGAAACTGAGGGAGCAGATTGGTGCGGCCGTCGGGCGAAAGGAGGATAATGAACCAtgagttaaatattaaaacgagTTCAACATGTTTGGGGTTTTTCTAAAGTAAACGCATGttataaaaaacacattgtaatgtttcatttcagttgCCCAAAGATTGTTTTCACCAAAAGTCTCATGTTCCTTCATGCATGGTTTTAAGCAATAAATGGATTATCATTAATAA

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238241.1 True 1969 mRNA 0.45 15 31074043 31081265

Neighbor

gene id symbol gene type direction distance location
rcl1 rcl1,LOC107701854,LOC107655287 coding downstream 9688 31053924 ~ 31064355 (-)
mcc mcc,LOC106565572 coding downstream 21454 30978593 ~ 31052589 (-)
cux2a NA coding downstream 122555 30942514 ~ 30951488 (-)
LOC122344688 LOC107743064,LOC107698017,LOC107734413 coding downstream 132161 30920817 ~ 30941882 (-)
rabepk rabepk,LOC107743065,LOC107579283 coding downstream 238309 30831189 ~ 30835734 (-)
rplp0 rplp0,LOC107654305 coding upstream 27458 31108723 ~ 31112733 (-)
gusb gusb,LOC107719352,LOC107701859,LOC107654306,LOC107734369,LOC104964597,LOC107591494 coding upstream 61312 31142577 ~ 31155113 (-)
ca4a LOC107663683,LOC107654307,LOC107734368,LOC107719346 coding upstream 109898 31191163 ~ 31196967 (-)
LOC122345520 LOC107663881,LOC107725093,LOC107654310,LOC107734346,LOC107563427 coding upstream 288545 31369810 ~ 31454508 (-)
hspb1 LOC107591466,LOC107667824,LOC107725127,LOC107562193,LOC107654311,LOC107734358 coding upstream 417224 31498489 ~ 31503030 (-)
G40794 NA non-coding downstream 34586 31038405 ~ 31039457 (-)
G40782 NA non-coding downstream 95721 30977609 ~ 30978322 (-)
LOC122344702 NA non-coding downstream 99160 30974318 ~ 30974883 (-)
LOC122344701 NA non-coding downstream 110536 30959444 ~ 30963507 (-)
LOC122344700 LOC108429729,LOC107563441 non-coding downstream 148846 30921178 ~ 30925197 (-)
G40798 NA non-coding upstream 6927 31088192 ~ 31094923 (-)
LOC122344940 NA non-coding upstream 139552 31220817 ~ 31222257 (-)
G40841 NA non-coding upstream 191421 31272686 ~ 31273001 (-)
G40842 NA non-coding upstream 198912 31280177 ~ 31280431 (-)
G40995 NA non-coding upstream 341820 31423085 ~ 31506097 (-)
G40752 hspa5,LOC107686379,LOC107743071,LOC107687227,LOC107567952,LOC107734417,LOC107734415,LOC107686377 other downstream 247685 30817732 ~ 30826358 (-)
G40713 lzts3,LOC107567954,LOC107687254,LOC107574519,LOC795227,LOC107665914 other downstream 281324 30789633 ~ 30792719 (-)
G40711 NA other downstream 340683 30631028 ~ 30733360 (-)
fubp3 fubp3,LOC107689604,LOC107687236,LOC106566971 other downstream 460902 30590843 ~ 30613141 (-)
rnf170 rnf170,LOC107721034,LOC107687247 other downstream 980467 30087966 ~ 30093576 (-)
LOC122344987 LOC107591496,LOC107663763,LOC107725109,LOC107734348,LOC107563429,LOC107654309 other upstream 250084 31331349 ~ 31350449 (-)
apooa apoo other upstream 621188 31702453 ~ 31711737 (-)
G41035 LOC107734367,LOC107665727,LOC107725151,LOC107591476,LOC107654325,LOC563292 other upstream 640005 31721270 ~ 31722906 (-)
tnca zmp:0000000846,LOC107715542,LOC107557573,LOC107591511,LOC102306937,LOC107725145 other upstream 1032631 32113896 ~ 32174064 (-)
LOC122346090 LOC107704013,LOC107725152,LOC107748063,LOC107654332,LOC107557589,LOC107594564 other upstream 1132766 32214031 ~ 32293782 (-)

Expression


Co-expression Network