cux2a


Basic Information

Item Value
gene id cux2a
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 30942514 ~ 30951488 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238243.1
ATTGGCTGTGGCCGTCCTCTCCTCGGCTCTGGTCTGATGTGAGTCTGCTGAAGCTCTGCTGGAAACACGCCGCTATCAGGAGCACGTCCACAAACTCATGgatctgtgtgtgtttgctgcagCGCCACCAACGTCTGATTTGGAGACGATGGTCGCGTCGAGAGATCGTGACCTTCACCGTCTGGAACAGGAAGTGCGACGGCTTCAGCGTCTCCTGCAGGAAGTCCAGGTGCGATCGGCCAATCGCGTCGCTCTGCTGGAACAGCAGCTGGCCAGTAAATCCCAGCACATAGAGAGACTTCAGGCCGAGCTCCAGAACCAGCGGGACCACGGAAGATCCGGACCGAGCTCAGGACTCTCCGAGCGCTGATGCAAAGCACTGAAGTAGTTTCGGTTTCTGATGTCAGGAGCATCTCTGTTGATGAAGATCCTGTGATCCAGAAAGAAAGGACAGAGTTTCATCCGTGCGCTGGAGAAGAAGAAGCCCTGAATGAATCCTCTTCATGGTCTCTGAGCGTCCAGAGCTTCATCAAAGAGGAGACCGACTGTGGTGAAGACGAGGAGGAGTGTGACACGGCTCGATTAGCTCGGCGGGTGAAGGACGCTCTTCAGCGGCTCAACATCGGTCAGCGGGTGTTCGGTCACTACGTGCTCGGCCTCTCTCAGGGGACCGTCAGCGACATCCTGGCCAGACCCAAACCCTGGAGCAAGCTGACCAGCAGAGGAAGAGAACCCTTCCTCAGAATGAAGCACTTCCTGTCTGACGAGCGCAGCATCCGAACGCTCGGCGCCATCCAGGAGACACTGAGAGGCGTCTTGGTGTCGTGGGCCGCTCCTGAAAGAAGCTCAGAAGACGTGATCAAGAAGGTTCTGGATCAGAGACGTCTGCAGATGCTGGATATTAATgacgatgatgacgatgatgaagGCAGCAGGCGGGATGGAGACTCATCAGATGACATCATCAGGAGCATCCTGCAGCAGGCCAGACACGAGACGCAGACGGAGACGGCCCGGCGGGGAGGAGAGGATTCTGGGACGCCGGAGCCCAGCGCTCGGTCCACGGCTGATTTTGTCCAAAGCATCATTCAGAAAGTCAAGTGTGAACTAAAAGAAGACCCAGGGCCCTCAGCTCCTCCAGCGGGTCCGGGGCCGGAGCCTCAGAGACCTCGCTCCTGTCCCATCAGCAGCGGCTCTGAGCTTCACGCTCTGTGTCTGGACACACTCCACATCACACACAGAGTCAAAGAAACACTCAGCACCAACAacatagGTCAGAGAGTGTTTGGTGAAGAGGTTTTGGGTTTAACACAGAGCTCGGTGTCTGAACTGCTGTCACATCCcaaaccctggaagaaactcaGTCTGAAGGGAAAGGAGAACTTCATCCGCATGCATCTGTGGCTCCAAGACCCTCAAAACATCCAGAAGATCAAGGATAAGAAGAAGATGGACCATAGAGCTCGTCTGAAGCGTGTTCTGACCGGATCAGGGGGTTCCTCTCAGAGGTGGCTGGACGCAGGAGCTCAGGGGTTTAGTGATGACCGGGGCCGGTGCGAGGCCACGAAGAGGCCGAGGGTGATCCTCAGCGCTCCGGAGAGAGAAGCACTGCTGGAGACGTATCGGACGGAGCCGTATCCGTCTCAGATCACCGTCGAGAGGCTCGCGGCACGGCTGGGTCTGAACACCAGCACTGTTAGCAACTGGTTCTACAACTACAGGTCTAGACATAGACAAGATGTTCTTTCTGCTCCAGGAGAACCCAGAACTTTTCCGAGTCCAGTCGTTCGTAGTCCGGTTTCAGCCGGTGTAGACCGAATCAAACAGGAGCCCAGTGATGGAGAGACGGAGGACACGGATCTGCTCGGACACGTCTCTGTCGGCGTACAGTCCATCTCCAGAGTGAAGACCGAGAGAGAGGAAGATCTCTTCTCCTAAACAATGAAGAAAACGTCTCCCTGATGAGCTCcaaatctgtctttttttattcagaatttaATTTCAGGAATAAGTAAACCCTGACTGGCCAGattggtttatatttttttttagcgtgACTGAAGAATAATTGTTGGTTGTATAGTTGTTTGATAACTACTTGTATAAGTTCATTTATATTCGGTCTGGTTTGGAGACTAAATGGTACATGGGAAAGTTTGCTAATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238243.1 True 2165 mRNA 0.54 12 30942514 30951488

Neighbor

gene id symbol gene type direction distance location
LOC122344688 LOC107743064,LOC107698017,LOC107734413 coding downstream 632 30920817 ~ 30941882 (-)
rabepk rabepk,LOC107743065,LOC107579283 coding downstream 106780 30831189 ~ 30835734 (-)
LOC122344907 NA coding downstream 172607 30765631 ~ 30769907 (-)
golga2 golga2,LOC107658391 coding downstream 187574 30734104 ~ 30754940 (-)
ciz1a ciz1a,LOC107687257,LOC107571633,LOC107740230,LOC107689607 coding downstream 270418 30660119 ~ 30672096 (-)
mcc mcc,LOC106565572 coding upstream 27105 30978593 ~ 31052589 (-)
rcl1 rcl1,LOC107701854,LOC107655287 coding upstream 102436 31053924 ~ 31064355 (-)
LOC122344691 NA coding upstream 122555 31074043 ~ 31081265 (-)
rplp0 rplp0,LOC107654305 coding upstream 157235 31108723 ~ 31112733 (-)
gusb gusb,LOC107719352,LOC107701859,LOC107654306,LOC107734369,LOC104964597,LOC107591494 coding upstream 191089 31142577 ~ 31155113 (-)
G40760 LOC108429729,LOC107563441 non-coding downstream 17317 30920851 ~ 30925197 (-)
LOC122344700 LOC108429729,LOC107563441 non-coding downstream 17317 30921178 ~ 30925197 (-)
G40762 NA non-coding downstream 22914 30866243 ~ 30919600 (-)
G40751 hspa5,LOC107687227,LOC107567952 non-coding downstream 95636 30821125 ~ 30846878 (-)
G40739 NA non-coding downstream 170490 30770714 ~ 30772024 (-)
LOC122344701 NA non-coding upstream 7956 30959444 ~ 30963507 (-)
LOC122344702 NA non-coding upstream 22830 30974318 ~ 30974883 (-)
G40782 NA non-coding upstream 26121 30977609 ~ 30978322 (-)
G40794 NA non-coding upstream 86917 31038405 ~ 31039457 (-)
G40798 NA non-coding upstream 136704 31088192 ~ 31094923 (-)
G40752 hspa5,LOC107686379,LOC107743071,LOC107687227,LOC107567952,LOC107734417,LOC107734415,LOC107686377 other downstream 116156 30817732 ~ 30826358 (-)
G40713 lzts3,LOC107567954,LOC107687254,LOC107574519,LOC795227,LOC107665914 other downstream 149795 30789633 ~ 30792719 (-)
G40711 NA other downstream 209154 30631028 ~ 30733360 (-)
fubp3 fubp3,LOC107689604,LOC107687236,LOC106566971 other downstream 329373 30590843 ~ 30613141 (-)
rnf170 rnf170,LOC107721034,LOC107687247 other downstream 848938 30087966 ~ 30093576 (-)
LOC122344987 LOC107591496,LOC107663763,LOC107725109,LOC107734348,LOC107563429,LOC107654309 other upstream 379861 31331349 ~ 31350449 (-)
apooa apoo other upstream 750965 31702453 ~ 31711737 (-)
G41035 LOC107734367,LOC107665727,LOC107725151,LOC107591476,LOC107654325,LOC563292 other upstream 769782 31721270 ~ 31722906 (-)
tnca zmp:0000000846,LOC107715542,LOC107557573,LOC107591511,LOC102306937,LOC107725145 other upstream 1162408 32113896 ~ 32174064 (-)
LOC122346090 LOC107704013,LOC107725152,LOC107748063,LOC107654332,LOC107557589,LOC107594564 other upstream 1262543 32214031 ~ 32293782 (-)

Expression


Co-expression Network