ca4a (LOC107663683,LOC107654307,LOC107734368,LOC107719346)


Basic Information

Item Value
gene id ca4a
gene name LOC107663683,LOC107654307,LOC107734368,LOC107719346
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 31191163 ~ 31196967 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238259.1
GAGAGCGAAGCATCCTTCAGAGGATCTAGCGTGGATCTAGCACTGATTAACTGAAGCataatatgctaaaaatatCCAAAGGACTAACTCCTCTTTTATACTCACGCAGACTGGTGTTACCAGACGCAGGTGAGCTGTGACTCTCACTGTAAAGGACCAGAACGATGGAGTGAAGTGAAGGAAGACTGTGGGAAGAACAGACAGTCACCAATCAACATAGTGACGAAGAAGACCAAGCTGGACGAGCGACTGACGCCGTTCAAGTTCACCGGCTACCAGACCTTATTCGACAGCACCATGAAGAACAACGGCCACTCGGTTCAGGTCAATGTACCCATCACAGCCACAGTGTCTGGAGGAAACCTGGGAGAAACGTACAAGGCTGTGCAGTTTCACCTTCACTGGGGCACAGACGGAGGGCCTGGATCCGAACACACCGTCGATGGAGAGCAGTATCCTATGGAGCTGCATATTGTGcacatgaaacaaaaatacaacagaaTTGAAGACGCACTCAGAGATCCTTCAGGAATCGCGGTGCTGGGATTCTTCTACGAGgAGTCAAGCAGCTCCAACAAAAATTATGATCGCTTCACACTCGGCCTGCGCGGCGTCCAGAACACAAATGGAAACACGTCGCTTTATAGGACCTCTCTGAACCAGCTGATTCTCCCTGAAGTTAACATGACTAACTATTACCGGTATGAAGGCTCTCTAACCACCCCGGGCTGCACGGAGGCTGTGCTGTGGACGGTGTTTGAAAACCCCATTCCTCTCAGCAGAGAACAGCTCCGGGCTTTTTCAACCCTGAAGTTCCACGACGGGTCCCCGATGGTGGGAACGTTCAGACCGGTTCAGCCCCGTAACGGCCGCGTGGTTTACCGGTCCGGCGGAGCAGCGGTCGCCGCCAGCGTCCTCCTGGTTCTGACCTCCATCGGCGGCGCGCTCGGCCTGTCCCGTCCCAACTAGACCCAGACCGACCCCAAACCAGCACAATGAGTTCTCAGCCAATCGACAGACCGACAGAAGAAAACCACAAACCAGCCGTCTCTACAGGACACTAGAGTAGTTAGCGTAGACGCGTGTTCGTAGCTTTCAATAGGAGCCGGGCTAAAGCCGCTCGGGCTTTCTGTGAAGGTCTGACCGGGAATAAATGCATGACCTTTATCTGTTATAGACATCTgccaaacatacacacacacacacagcggctATATTTACGAAGGCTTTGATGTGCCGGAGATGTGCATTACTAACACACTCGACGATGATCAGCGCTCTACTGGTGAAAGGTCACAGAGGTCAAAGGTGAAAGGTCACGGAGCCGTGAGAGCAGAGAGAAGCGCACAAATATATCCACATTAATTATGTTGACAGTTTCATAGGGTGCATGATGTTATCTGATATTATTTGGAATTATTTGCAATGTGATGGACGTGCACTCTGTATggcgtatatatatatgaaattgcatttttattaggaGTGTAACGATACGCGTACTCgttttccaaatcaaagtgatCGTCCTCATGCCCTTGTTAGTGAGGACTTGAGTGAGCAGAGCATGTGCATGTCTCTGGGATGTTGCCGTGACAACAAACGCAACGTGCATCAGCTAATTCcacttaatataattttttttatatatacatattagttttatatattagcatattttaacattttcaaatataaaatgtttgtttatttgcaacagTTTTGCTAACGATATACTTATCGTTACACGCCACATTTTtctatatgcataaatatatataaattatttcatacagtatgtatatatgaagagttcatttgcaaaaacagataactccattaattgttaattaattattaactatttttaaaaatcattgtgcattccagttaatctTAATAAAACTGCAGCTGGGAAATTTTGattcggtaaaaaaaaaaaaacattaataacacagttatatatatatatatacatatataaaataatctaaaaataaatacagctaacaaacaaaataaaacattataccataataaaaaaatcatctgtttttgcaaataagctcttcacatatatatatatatatatatatatatatatatatatagtatatatatttattcctgTCCAGTTTGCAAACTGCTGTCAGACTGCTAAAAATGTGCCAAGTGTAGAAATAAAGGGAACCAAGTACTTTCTAAATTTCTAAGTTTAACCCAGACATGCATTGCTTCAGACACATAAAACCCTTCGCCTTAGTCAATAGAGATGGAGAGAGTGAAAGTGGTGAGTTCTCTGTGATAAGACTTTGTTTCACTACACTTACAGTCTGTGGCATGATATTTACACACATCTCGAAGTCATGCATCTCGCGCACAAACCTGTACTGTACGTCCAAAAGATTCTGTTGGGGTCTGCTGTGAGGACACATGACTTGTGTTTTATAAACTCTGAGGGCCTCAGACGCACTAAACGTGATGCATTGATGCTCTTAGCGGAGAAAATGAGCATGATGATTAGTATTTGCTGTAAAGGCTTTTCAGACTCTACTAACAGGGAAACGTGCAACTTCTGTACTCATAACGCACATCAACTTTAACtacatgtatgttttttgtgtatgtatgtatgtatattaagcGCTGCTGTTTAATATGTGAAGCTGACCTCTGGAGACTCAAATGAGCAGCAAAGCATCACTCAATCACCATCTCCTGTCTGTGCATAGTGATATTTCATCTTCATTTACATTGAAAATGTCAGTTTTGTCAACCTGTCAGAATGCACTGATGATATTATGATGATGTAACTGCTAACAATATAGCGAATGCATtccagaatattaataaatggctgcatttcattttttaaa

Function

NR:

description
carbonic anhydrase 4-like isoform X1

GO:

id name namespace
GO:0006730 one-carbon metabolic process biological_process
GO:0008270 zinc ion binding molecular_function
GO:0004089 carbonate dehydratase activity molecular_function

KEGG:

id description
K18246 CA4; carbonic anhydrase 4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238259.1 True 2876 mRNA 0.42 7 31191163 31196967

Neighbor

gene id symbol gene type direction distance location
gusb gusb,LOC107719352,LOC107701859,LOC107654306,LOC107734369,LOC104964597,LOC107591494 coding downstream 36050 31142577 ~ 31155113 (-)
rplp0 rplp0,LOC107654305 coding downstream 78430 31108723 ~ 31112733 (-)
LOC122344691 NA coding downstream 109898 31074043 ~ 31081265 (-)
rcl1 rcl1,LOC107701854,LOC107655287 coding downstream 126808 31053924 ~ 31064355 (-)
mcc mcc,LOC106565572 coding downstream 138574 30978593 ~ 31052589 (-)
LOC122345520 LOC107663881,LOC107725093,LOC107654310,LOC107734346,LOC107563427 coding upstream 172843 31369810 ~ 31454508 (-)
hspb1 LOC107591466,LOC107667824,LOC107725127,LOC107562193,LOC107654311,LOC107734358 coding upstream 301522 31498489 ~ 31503030 (-)
srrm3 srrm3,LOC107591468,LOC107734356,LOC107562180,LOC107725131,LOC107654313 coding upstream 309512 31506479 ~ 31567684 (-)
LOC122344718 LOC107725156,LOC107654314,LOC107591470,LOC107734345,LOC100535945,LOC107562196 coding upstream 371813 31568780 ~ 31590397 (-)
LOC122344719 c1qbp,LOC107725147,LOC107664384,LOC107654317,LOC107734359 coding upstream 397510 31594477 ~ 31598310 (-)
G40798 NA non-coding downstream 96240 31088192 ~ 31094923 (-)
G40794 NA non-coding downstream 151706 31038405 ~ 31039457 (-)
G40782 NA non-coding downstream 212841 30977609 ~ 30978322 (-)
LOC122344702 NA non-coding downstream 216280 30974318 ~ 30974883 (-)
LOC122344701 NA non-coding downstream 227656 30959444 ~ 30963507 (-)
LOC122344940 NA non-coding upstream 23850 31220817 ~ 31222257 (-)
G40841 NA non-coding upstream 75719 31272686 ~ 31273001 (-)
G40842 NA non-coding upstream 83210 31280177 ~ 31280431 (-)
G40995 NA non-coding upstream 226118 31423085 ~ 31506097 (-)
G40996 NA non-coding upstream 238682 31435649 ~ 31495269 (-)
G40752 hspa5,LOC107686379,LOC107743071,LOC107687227,LOC107567952,LOC107734417,LOC107734415,LOC107686377 other downstream 364805 30817732 ~ 30826358 (-)
G40713 lzts3,LOC107567954,LOC107687254,LOC107574519,LOC795227,LOC107665914 other downstream 398444 30789633 ~ 30792719 (-)
G40711 NA other downstream 457803 30631028 ~ 30733360 (-)
fubp3 fubp3,LOC107689604,LOC107687236,LOC106566971 other downstream 578022 30590843 ~ 30613141 (-)
rnf170 rnf170,LOC107721034,LOC107687247 other downstream 1097587 30087966 ~ 30093576 (-)
LOC122344987 LOC107591496,LOC107663763,LOC107725109,LOC107734348,LOC107563429,LOC107654309 other upstream 134382 31331349 ~ 31350449 (-)
apooa apoo other upstream 505486 31702453 ~ 31711737 (-)
G41035 LOC107734367,LOC107665727,LOC107725151,LOC107591476,LOC107654325,LOC563292 other upstream 524303 31721270 ~ 31722906 (-)
tnca zmp:0000000846,LOC107715542,LOC107557573,LOC107591511,LOC102306937,LOC107725145 other upstream 916929 32113896 ~ 32174064 (-)
LOC122346090 LOC107704013,LOC107725152,LOC107748063,LOC107654332,LOC107557589,LOC107594564 other upstream 1017064 32214031 ~ 32293782 (-)

Expression


Co-expression Network