bmpr1ba (bmpr1ba,bmpr1b,LOC107725167,LOC107704129,LOC107594551,LOC107667882,LOC107725174)


Basic Information

Item Value
gene id bmpr1ba
gene name bmpr1ba,bmpr1b,LOC107725167,LOC107704129,LOC107594551,LOC107667882,LOC107725174
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 32638260 ~ 32681474 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238261.1
CTTGGAGTTCCCGCGCGTCTCGCGCTGCTGATGTTGACGAACGCTGAAGACGTTCGTGTTGAACGGACACATCATTCACACGGACTCTCCGGAGCTTTTGGGAAGAAACCACGGAGACTTGGACTTCAGAACGGGTGATCtgtattctgattggctgtagATTGGTTATGGATCGTCCTTATATCAGAAAGATTTCCATTGCACATGTTGTGATGATTTGTGGGAGCTAATGCACACGGGACAGCGATACATGTGCAGTCGGTGTGAAGCTGTGATTGAGGCTGCTGTGGGGTGTGCAGTTTCTCACATTCTgtagaggacacacacacacacacacacagacacacactcaagAGTGTGTGCCGAGCAGACAGCTGAGGGATTCGCTCGCTCGCTGGAGTTGCGCACACAGAAGATGGATCTCTCGAGGACTTGCTTGCGTTGGGTCTGTGTGCTGGTCATTGGACTTCTGGGACTCGTGGAGGAGAACTTGGcTAACGTTCTGGACACCATGCTGCTGAGGAATTCTGGGAAGGCGGACGAACGCCGGGAGACAGGAAGCGAGGCTCCGGCTCTACCTCAGCGCTTCCTGTGGTGCTACTGCTACCATCACTGTCCGGAGGACTCCACTAACAACACGTGCAGGACGGACGGTTACTGCTTCACCATGGTGGAGGAAGAGGGTGGAGCGGCTGTGGTGACGTCAGGCTGTCTGGGTCTGGTCGGATCAGAGTTTCAGTGCAGAGACACGGGGAACTCTAAACAGCGGCGAGCGCTCGAGTGCTGCACAGATCAGGACTACTGTAACAGAGACCTACATCCAACACTTCCTCCTCTACGAACACCCAgttACGTGGTGGGAGACATTCATCACATCGCTCTGCTCATCTCAGTGACTGTCTGTAGCTTCATCCtcaccttcatcatcatcttctgtTACTTCAGGTATAAACGTCACGAGTTAGCTCCTCGCTACAGCCTCGGCCTGCATCCAGACGAGACGTTCATTCCTCCGGGAGAATCCCTGCGGGATCTCATAGAGCAGTCCCAGAGCTCCGGCTCAGGATCAGGACTCCCCCTGCTGGTGCAGCGCACTATAGCGAAGCAGATCCAGATGGTGACACAGATCGGGAAGGGCCGTTATGGAGAGGTGTGGATGGGGAGATGGAGGGGAGAGAAAGTGGCTGTGAAAGTCTTTTTCACTACAGAGGAGGCCAGCTGGTTTAGAGAGACGGAGATATATCAGACTGTCCTCATGAGACATGAGAATATACTCGGTTTCATCGCGGCCGATATTAAAGGCACGGGCTCGTGGACTCAGCTCTACCTCATCACCGACTACCACGAGAACGGCTCTCTCTACGACTATCTGAAATGCACCACCCTGGACAGCCGGGCCATGCTGAGACTGGCCTACTCGTCCGTCTCCGGCCTCTGCCACCTTCACACGGAAATCTTTGGCACGCAGGGCAAACCGGCCATCGCTCACAGAGACCTGAAGAGCAAAAACATCCTGGTGAAGAGGAACGGAGCCTGCTGCATCGCTGACCTCGGCCTGGCTGTCAAGTTCATCAGCGACACTAATGAAGTGGACATCCCTCTGAACACACGCGTGGGCACCAAACGCTTCATGGCTCCCGAGGTTCTGGACGAGACTCTGAACAGGAACCATTTCCAGTCCTACATCATGGCCGACATGTACAGCTTCGGCCTCATACTGTGGGAGATCGCCCGCCGATGCGTGTCTGGAGGTATCGTAGAGGAGTATCAGCTGCCCTATCACGATCACGTTCCTAATGACCCGTCGTACGAAGACATGCGAGAGGTTGTGTGTATTAAGAGAATACGGCCGTCTTTCCCTAACCGCTGGAGCAGTGATGAGTGTTTGAGGCAGATGGGGAAGCTGATGACGGAGTGTTGGGCTCATAACCCGGCGTCTCGTCTCACCGCCCTGCGTGTTAAAAAGACGCTGGCCAAGATGTCGGAGTCCCAGGACATTAAAGTCTGAGAACAGAGCGGCCAGCACGGACACTTAACCCCCAGCTCACTGCCTCACGAGAGAAATCTCAGGACGGAGCCGGAGCCGGAGCCGGTCCCGCTGCGTGACGCAGGGCCTCGGCGAGCGAGATCACGTGACTCTCCTCACAGGACGGTCAGCTTGCTCTTTCCACAATCTGTTCAGCTCCAACAGGACCGTGGTTTTGGATCGTATCGGATTTGTGGCGTCAGTCAGTCAGCTTTCAACAAGTTTCCCGCCTTTTTTTGGTGGGCTGtgccttatttattttgtaaatagaTGAAAATGAGATTGAAGCGTCAATGTACTTGAATAAATGCTCTAAAGAgaa
>XM_043238262.1
CTTGGAGTTCCCGCGCGTCTCGCGCTGCTGATGTTGACGAACGCTGAAGACGTTCGTGTTGAACGGACACATCATTCACACGGACTCTCCGGAGCTTTTGGGAAGAAACCACGGAGACTTGGACTTCAGAACGGGTGATCtgtattctgattggctgtagATTGGTTATGGATCGTCCTTATATCAGAAAGTCGGTGTGAAGCTGTGATTGAGGCTGCTGTGGGGTGTGCAGTTTCTCACATTCTgtagaggacacacacacacacacacacagacacacactcaagAGTGTGTGCCGAGCAGACAGCTGAGGGATTCGCTCGCTCGCTGGAGTTGCGCACACAGAAGATGGATCTCTCGAGGACTTGCTTGCGTTGGGTCTGTGTGCTGGTCATTGGACTTCTGGGACTCGTGGAGGAGAACTTGGcTAACGTTCTGGACACCATGCTGCTGAGGAATTCTGGGAAGGCGGACGAACGCCGGGAGACAGGAAGCGAGGCTCCGGCTCTACCTCAGCGCTTCCTGTGGTGCTACTGCTACCATCACTGTCCGGAGGACTCCACTAACAACACGTGCAGGACGGACGGTTACTGCTTCACCATGGTGGAGGAAGAGGGTGGAGCGGCTGTGGTGACGTCAGGCTGTCTGGGTCTGGTCGGATCAGAGTTTCAGTGCAGAGACACGGGGAACTCTAAACAGCGGCGAGCGCTCGAGTGCTGCACAGATCAGGACTACTGTAACAGAGACCTACATCCAACACTTCCTCCTCTACGAACACCCAgttACGTGGTGGGAGACATTCATCACATCGCTCTGCTCATCTCAGTGACTGTCTGTAGCTTCATCCtcaccttcatcatcatcttctgtTACTTCAGGTATAAACGTCACGAGTTAGCTCCTCGCTACAGCCTCGGCCTGCATCCAGACGAGACGTTCATTCCTCCGGGAGAATCCCTGCGGGATCTCATAGAGCAGTCCCAGAGCTCCGGCTCAGGATCAGGACTCCCCCTGCTGGTGCAGCGCACTATAGCGAAGCAGATCCAGATGGTGACACAGATCGGGAAGGGCCGTTATGGAGAGGTGTGGATGGGGAGATGGAGGGGAGAGAAAGTGGCTGTGAAAGTCTTTTTCACTACAGAGGAGGCCAGCTGGTTTAGAGAGACGGAGATATATCAGACTGTCCTCATGAGACATGAGAATATACTCGGTTTCATCGCGGCCGATATTAAAGGCACGGGCTCGTGGACTCAGCTCTACCTCATCACCGACTACCACGAGAACGGCTCTCTCTACGACTATCTGAAATGCACCACCCTGGACAGCCGGGCCATGCTGAGACTGGCCTACTCGTCCGTCTCCGGCCTCTGCCACCTTCACACGGAAATCTTTGGCACGCAGGGCAAACCGGCCATCGCTCACAGAGACCTGAAGAGCAAAAACATCCTGGTGAAGAGGAACGGAGCCTGCTGCATCGCTGACCTCGGCCTGGCTGTCAAGTTCATCAGCGACACTAATGAAGTGGACATCCCTCTGAACACACGCGTGGGCACCAAACGCTTCATGGCTCCCGAGGTTCTGGACGAGACTCTGAACAGGAACCATTTCCAGTCCTACATCATGGCCGACATGTACAGCTTCGGCCTCATACTGTGGGAGATCGCCCGCCGATGCGTGTCTGGAGGTATCGTAGAGGAGTATCAGCTGCCCTATCACGATCACGTTCCTAATGACCCGTCGTACGAAGACATGCGAGAGGTTGTGTGTATTAAGAGAATACGGCCGTCTTTCCCTAACCGCTGGAGCAGTGATGAGTGTTTGAGGCAGATGGGGAAGCTGATGACGGAGTGTTGGGCTCATAACCCGGCGTCTCGTCTCACCGCCCTGCGTGTTAAAAAGACGCTGGCCAAGATGTCGGAGTCCCAGGACATTAAAGTCTGAGAACAGAGCGGCCAGCACGGACACTTAACCCCCAGCTCACTGCCTCACGAGAGAAATCTCAGGACGGAGCCGGAGCCGGAGCCGGTCCCGCTGCGTGACGCAGGGCCTCGGCGAGCGAGATCACGTGACTCTCCTCACAGGACGGTCAGCTTGCTCTTTCCACAATCTGTTCAGCTCCAACAGGACCGTGGTTTTGGATCGTATCGGATTTGTGGCGTCAGTCAGTCAGCTTTCAACAAGTTTCCCGCCTTTTTTTGGTGGGCTGtgccttatttattttgtaaatagaTGAAAATGAGATTGAAGCGTCAATGTACTTGAATAAATGCTCTAAAGAgaa
>XM_043238263.1
GTACAAGAGCGAGAAGCTGAGcTAACGTTCTGGACACCATGCTGCTGAGGAATTCTGGGAAGGCGGACGAACGCCGGGAGACAGGAAGCGAGGCTCCGGCTCTACCTCAGCGCTTCCTGTGGTGCTACTGCTACCATCACTGTCCGGAGGACTCCACTAACAACACGTGCAGGACGGACGGTTACTGCTTCACCATGGTGGAGGAAGAGGGTGGAGCGGCTGTGGTGACGTCAGGCTGTCTGGGTCTGGTCGGATCAGAGTTTCAGTGCAGAGACACGGGGAACTCTAAACAGCGGCGAGCGCTCGAGTGCTGCACAGATCAGGACTACTGTAACAGAGACCTACATCCAACACTTCCTCCTCTACGAACACCCAgttACGTGGTGGGAGACATTCATCACATCGCTCTGCTCATCTCAGTGACTGTCTGTAGCTTCATCCtcaccttcatcatcatcttctgtTACTTCAGGTATAAACGTCACGAGTTAGCTCCTCGCTACAGCCTCGGCCTGCATCCAGACGAGACGTTCATTCCTCCGGGAGAATCCCTGCGGGATCTCATAGAGCAGTCCCAGAGCTCCGGCTCAGGATCAGGACTCCCCCTGCTGGTGCAGCGCACTATAGCGAAGCAGATCCAGATGGTGACACAGATCGGGAAGGGCCGTTATGGAGAGGTGTGGATGGGGAGATGGAGGGGAGAGAAAGTGGCTGTGAAAGTCTTTTTCACTACAGAGGAGGCCAGCTGGTTTAGAGAGACGGAGATATATCAGACTGTCCTCATGAGACATGAGAATATACTCGGTTTCATCGCGGCCGATATTAAAGGCACGGGCTCGTGGACTCAGCTCTACCTCATCACCGACTACCACGAGAACGGCTCTCTCTACGACTATCTGAAATGCACCACCCTGGACAGCCGGGCCATGCTGAGACTGGCCTACTCGTCCGTCTCCGGCCTCTGCCACCTTCACACGGAAATCTTTGGCACGCAGGGCAAACCGGCCATCGCTCACAGAGACCTGAAGAGCAAAAACATCCTGGTGAAGAGGAACGGAGCCTGCTGCATCGCTGACCTCGGCCTGGCTGTCAAGTTCATCAGCGACACTAATGAAGTGGACATCCCTCTGAACACACGCGTGGGCACCAAACGCTTCATGGCTCCCGAGGTTCTGGACGAGACTCTGAACAGGAACCATTTCCAGTCCTACATCATGGCCGACATGTACAGCTTCGGCCTCATACTGTGGGAGATCGCCCGCCGATGCGTGTCTGGAGGTATCGTAGAGGAGTATCAGCTGCCCTATCACGATCACGTTCCTAATGACCCGTCGTACGAAGACATGCGAGAGGTTGTGTGTATTAAGAGAATACGGCCGTCTTTCCCTAACCGCTGGAGCAGTGATGAGTGTTTGAGGCAGATGGGGAAGCTGATGACGGAGTGTTGGGCTCATAACCCGGCGTCTCGTCTCACCGCCCTGCGTGTTAAAAAGACGCTGGCCAAGATGTCGGAGTCCCAGGACATTAAAGTCTGAGAACAGAGCGGCCAGCACGGACACTTAACCCCCAGCTCACTGCCTCACGAGAGAAATCTCAGGACGGAGCCGGAGCCGGAGCCGGTCCCGCTGCGTGACGCAGGGCCTCGGCGAGCGAGATCACGTGACTCTCCTCACAGGACGGTCAGCTTGCTCTTTCCACAATCTGTTCAGCTCCAACAGGACCGTGGTTTTGGATCGTATCGGATTTGTGGCGTCAGTCAGTCAGCTTTCAACAAGTTTCCCGCCTTTTTTTGGTGGGCTGtgccttatttattttgtaaatagaTGAAAATGAGATTGAAGCGTCAATGTACTTGAATAAATGCTCTAAAGAgaa

Function

symbol description
bmpr1ba Predicted to enable SMAD binding activity and transforming growth factor beta receptor activity, type I. Acts upstream of or within BMP signaling pathway and determination of dorsal identity. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of receptor complex. Predicted to be active in plasma membrane. Is expressed in several structures, including anterior neural rod; margin; nervous system; optic primordium; and ovarian follicle. Human ortholog(s) of this gene implicated in brachydactyly type A1D; brachydactyly type A2; and osteochondrodysplasia. Orthologous to human BMPR1B (bone morphogenetic protein receptor type 1B).
bmpr1b Enables ATP binding activity; SMAD binding activity; and transmembrane receptor protein serine/threonine kinase activity. Involved in several processes, including BMP signaling pathway; positive regulation of bone mineralization; and positive regulation of osteoblast differentiation. Predicted to be integral component of plasma membrane. Predicted to be part of receptor complex. Predicted to be active in plasma membrane. Implicated in brachydactyly type A1D; brachydactyly type A2; and osteochondrodysplasia. Biomarker of asthma and pulmonary hypertension.

NR:

description
bone morphogenetic protein receptor type-1B

GO:

id name namespace
GO:0048263 determination of dorsal identity biological_process
GO:0030509 BMP signaling pathway biological_process
GO:0006468 protein phosphorylation biological_process
GO:0016020 membrane cellular_component
GO:0005524 ATP binding molecular_function
GO:0004702 obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity molecular_function
GO:0005024 transforming growth factor beta-activated receptor activity molecular_function

KEGG:

id description
K13578 BMPR1B, ALK6, CDw293; bone morphogenetic protein receptor type-1B

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238261.1 True 2348 mRNA 0.54 14 32638260 32681474
XM_043238262.1 False 2281 mRNA 0.54 13 32638260 32681474
XM_043238263.1 False 1875 mRNA 0.55 11 32638260 32657179

Neighbor

gene id symbol gene type direction distance location
LOC122345374 LOC107748054,LOC107557581,LOC107704095,LOC107725138,LOC107594549 coding downstream 173637 32459458 ~ 32464623 (-)
ostf1 ostf1,LOC107704065,LOC107748057,LOC107659617 coding downstream 216662 32416225 ~ 32421598 (-)
LOC122345937 LOC107704040,LOC107557591,LOC107748061,LOC107725130,LOC103139561,LOC102299939,LOC100537556 coding downstream 295516 32315687 ~ 32342744 (-)
zgc:73226 zgc:73226,LOC107704030,LOC107725129,LOC107594543,LOC107557574 coding downstream 328120 32301359 ~ 32310140 (-)
rabl6a rabl6a,LOC108427817,LOC107725084,LOC107667101,LOC105021747 coding downstream 534474 32082560 ~ 32103786 (-)
pdlim5a pdlim5a,LOC107725153,LOC107704103,LOC107725180,LOC107594568,LOC107564363 coding upstream 3039 32684513 ~ 32719171 (-)
opn4xb opn4xb,LOC107704143,LOC107725176,LOC107667875,LOC107564366 coding upstream 43424 32724898 ~ 32733732 (-)
nipbla nipbla,LOC107667879,LOC107704848,LOC107725079,LOC107594572,LOC107571026 coding upstream 88755 32770229 ~ 32799945 (-)
slc1a3a slc1a3a,LOC107704160,LOC107725163,LOC107594554,LOC107667878,LOC107725178 coding upstream 120544 32802018 ~ 32812625 (-)
G41273 NA non-coding downstream 111191 32513392 ~ 32527069 (-)
G41217 NA non-coding downstream 157547 32480355 ~ 32480713 (-)
G41216 NA non-coding downstream 160420 32477262 ~ 32477840 (-)
G41191 NA non-coding downstream 192979 32444282 ~ 32445281 (-)
G41198 NA non-coding downstream 199115 32438619 ~ 32439145 (-)
G41303 NA non-coding upstream 85712 32767186 ~ 32767409 (-)
LOC122346085 LOC107748069,LOC107679343,LOC107594586 other downstream 323629 32283537 ~ 32314631 (-)
LOC122346090 LOC107704013,LOC107725152,LOC107748063,LOC107654332,LOC107557589,LOC107594564 other downstream 344478 32214031 ~ 32293782 (-)
tnca zmp:0000000846,LOC107715542,LOC107557573,LOC107591511,LOC102306937,LOC107725145 other downstream 464196 32113896 ~ 32174064 (-)
G41035 LOC107734367,LOC107665727,LOC107725151,LOC107591476,LOC107654325,LOC563292 other downstream 915354 31721270 ~ 31722906 (-)
apooa apoo other downstream 926523 31702453 ~ 31711737 (-)
LOC122345737 egflam,LOC107704151,LOC107667876,LOC107725173,LOC107725080,LOC107564362 other upstream 56943 32738417 ~ 32757869 (-)

Expression


Co-expression Network