LOC122344717 (LOC107664759,LOC107725124,LOC107654315,LOC107734362,LOC107562201)


Basic Information

Item Value
gene id LOC122344717
gene name LOC107664759,LOC107725124,LOC107654315,LOC107734362,LOC107562201
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 31600225 ~ 31613830 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238265.1
GCGCGTGTCAGTGTGGTGGGAGTTTTGTCCTTCACTGAGGAATGTTCATAACCGACGAAACGAGACACAACTCGTAAAATATCCATCAGATGGAAGCGATATAACACAGTAAATACCGCGAAACGCGTCTTCTCGAAGTTCACACTCATGGCGGACgtcaaacaaaagcttttattcgGAAATAAAGACGTTTCCAACGTTAACAGTTCTGACGGGACGCTCAGGAGTTTGGAAAAAACTGGAAGACCAAACCGCCAGAAGGAAAAGATAAATGGACTTAAAGACAGAACCCAGGACCTTAGGGAATCTCTCAATGATTCACTGGATGGGGAACTCAGAGACTTCCTCATCAATGAAGCTGAACTACACACATACGATGACCTCACTAAAGTCAACCCGGTTACACCTTCTACAGTGCTGAAATGTCTGCAGGCCAGGTACAGCGCTAAGGTTTTCTACACGCATGCTGGCTGCACGCTGGTCGCTCTCAACCCCTTTCAGCCCATTCCTCACCTGTACTCTCTGGATGTGATGAGGGAATACCACTCCGCTCCTCAACCTCAGGAGTTTAAGCCACACATCTTCATCGTAGCGGAAGAAGCTTATAGGAATGTGCAGGGCCAGGTGGAGCCCATGAACCAGTCGCTGGTCGTCTCTGGAGAAAGTGGAGCTGGGAAGaCATGGACGTCACGCTGCCTGATGAAGTATTATGCCACTGTAGCCACCTCTTCTCAAAAGTGCCAGGACACCGTAGAGAAGATAGAACGACGAGTACTGGACTCCAATCCAGTCATGGAGGCGTTTGGGAATGCCTGTACGTTACGCAATAGCAACAGCAGTCGCTTTGGAAAATACATTCAACTTCAGCTCAACAGCTCTCAGCTGCTGGTTGGGGCATCGGTGCAGACGTATCTTTTGGAGAAAACCAGAGTGGCTTTCCAAGCACCAAATGAGAGAAATTTTCACATATTCTACCAGATGATGAAAGGAGCCACAGGGAAACAGAGACTGGAGTGGATGCTGCCTTTGGAGCAAGACTTTGCTTGGTTGCCACAATCTGAGAAAACCTTAGAAGAAGACTGTTTGCAAGAGACGGTGGAAGCCATGATCAACCTTGGCATTGATGAGGGGAAAAGATCACAGCTTTTTAGGATCCTTGCAGGTCTTCTGCAGCTGGGGAACGTGAACTTCAGTCCTGCGTCAGAAGAGGCTCAGCCGTGTGATCTTGACGGACACTCAAAAGGTTTCTTGCAGAAGACCGCTGACCTGCTGCAGGTGCCGTTAGACGAGCTGCAGTCATGTCTGAGCGTGAGAGCTCTGCGCGCTGGCAAACAGAGCATACTCAAACCTTGCTCTCTGTCGGAGTGTGGCGTCCGCAGAGACTGCCTGGCTAAAGTCATTTATGCACAGCTGTTTGACTGGTTAGTCACTTTCATAAACAACAGTATGTGTGCAGAAGATCCCATGTGGTGCAACTTCATTGGCCTGCTGGATGTGTACGGGTTTGAATGCTTCCTCCAGAACAATCTGGAGCAGCTGTGCATCAATTACGCCAACGAGAAGCTGCAACAGCACTTTGTGGCTCATTACCTGAAGGCTCAGCAGGAGGAGTATGTGTCCGAGGGGCTGCGGTGGTCCTTCATACGGTACCAAGACAACCAGGGATGCCTGGACCTGGTTGAAGGCAGCCCCTCCAGCATTTTCTCCCTGCTCAATGAGGAGTGTCGTCTGAACAGAGCATCGGATGCAAAGCAGTTTTGTGTGCGTCTGCAGAAGGAGCTGTCAGACAATGCCAGCATCAGCTGGGACAAACTCAGCAAGGAGCCCCATTTTACTGTGGCCCACTATGCAGGAAAAGTCAGTTACCAGATCGAGGGCATGATGGAGAAGAACAAGGACCCAGTTCCCCCTGAGATCCTCAGTCTCCTGCAGAAGTCCCAGGATTCATTGCTGCACAGTCTCTTTGCGGGCAGCGACAGTGAGAACGAGGGGTCTAGAGGACACAGCAAAGTGGTCACTGTCGTATCCAAATTTAAGAACTCTCTTGAAAGCCTGATGAAGATTTTGCACAGCACCACGCCGCACTACACGCGCTGCATCAAACCCAACCCAGACTGCAGGCCGCTCACCTTCAAAAAGGAAGAGGTTATCGCTCAGCTTGAGGCGTGCGGGATAGTAGAAACCATAAACATCAGCGCAGCGGGATTTCCCATCAGGATCCCATATGGCAGTTTCCTCCAAAGATACGGGCTGATTGCGAACACCAGACTAACTGCACAAATGAACCCAGAGAACAGCCCTGAGATGAGCAATAAGGCCATCCTGGGATCTTCTGCAGAGAATGTGCTCAATGTGGTCCTTAAGAGACGCGTCCCGAACTCCGCCCTCAGCCCTgatgacaacaacaacatggTGCACTGTGGCAGAACCAAAGTCTTTCTCACACACTCCCTGCTGGAGATGCTGGAGGAGCACAGGACCAGGGTGCGCTCACAGAAGGCGCTCTGTATCCAGTGCTGCTGGCGCAGGCACCAGACCCGTCAGCGTCACCTGAGGACGCAGGCTGCCACACGCTTACAAGCAGgtgTGAGATCCTGGCTGGTCAGAAGAGAGATTAAGAAATGGCACAAAGCTGCATCGATCATCCAGACCGAATGGAGGCGCTGGAGGGCGTGGATGGATGCGTTAGCCGAGGCAGAGCTGGATGATGCCGAGGATTTCATGGAGAAAGAAGCGTCGTCGGTGCTGCCGAAGCTGGACCCTCTGCTGAAGGAGAGAGGATCGGTGCAGCTCTCCAGCATCCAGGAGCCTGTGATGGTCAGAGGCTGGCCCATCGGTCTGGCCATAGCCTCTGCTCCCAGCATCACCGTCTCTCTGACGGCCACTGGTTTCCAGCGGATCATGTCCATGATGGCCTGCCTGAAGATCCCGTTCAGACACGGTGAATACAAAGTGAACACCAACCAGTTTGACCAGGGTGTGGCGTCTATCAGAGCTCAACCACGGGGCTCCATTAAGATGCATCTTCAGAGGTCTCCGCTGCTCTATGCTGACATGCATCCAGCGCACAAGACAGACGTGGTGACCGGATTCAACCAGATCCTGCTGGAGAGAACCTGAGATTTCGTGCTGTTATAAGCTTACCTGCAATCGGTGCACCTTTACAATACACTACATTTAAGTGATATTAGCCTTATTGCCTTATTAGTGCACTTAGTTGTATTTACTCTCTCAGGTTTTGGCATAAAGCACAAGTGCCTTTCGTCTCTGCTGCGTGTGCAATCAGTATATACTACAAAGCGTTTTCTAACGATTACTTTATACTAGCGCGATCTgtcataatttaaatgtttattgcacAGCTTGAATGTAGATGAGAATTCAGTTCGTATTCATAACATGCTGCTAATATACCAAAATCAGGTATTTTGAAACCATCACGTGGTTCTGTTAATATCAGTTACAAACTGATAAAATAACAGGCTTTAAAACATTGTGaggtttttaatgattttaagttATGATAACGGAAGGAGAATATAGTGTTCAGGTTTTGTacgcttttttaattttttcttctttacagACACTACATGGTAAATACTGGGGAAAGCCACCGTTTCAGCATTGCTTTTAGTGCACTTAACCAGGTTTTTTTGACTTGTTGCTGTTTTagtctgaaatgtattttcaaacaGCAACTGCACAGCATTCCTCGCGTTTTcgtttttgaaacatttaatcGCATGAACAGACTGCTTTTAATGACcaaaaatatctaatatctcaggacaataattataaacacattttctagTACAGCGTAGTACTTCTTATCAAACCAATCAACACCATGTCAAACTTTGATCTTGCCAATAAAGATCATTACAGGCTTC

Function

NR:

description
PREDICTED: unconventional myosin-XIX-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238265.1 True 3896 mRNA 0.48 23 31600225 31613830

Neighbor

gene id symbol gene type direction distance location
LOC122344719 c1qbp,LOC107725147,LOC107664384,LOC107654317,LOC107734359 coding downstream 1915 31594477 ~ 31598310 (-)
LOC122344718 LOC107725156,LOC107654314,LOC107591470,LOC107734345,LOC100535945,LOC107562196 coding downstream 9828 31568780 ~ 31590397 (-)
srrm3 srrm3,LOC107591468,LOC107734356,LOC107562180,LOC107725131,LOC107654313 coding downstream 32541 31506479 ~ 31567684 (-)
hspb1 LOC107591466,LOC107667824,LOC107725127,LOC107562193,LOC107654311,LOC107734358 coding downstream 97195 31498489 ~ 31503030 (-)
LOC122345520 LOC107663881,LOC107725093,LOC107654310,LOC107734346,LOC107563427 coding downstream 145717 31369810 ~ 31454508 (-)
si:ch211-283g2.1 si:ch211-283g2.1,LOC107734371,LOC107591505,LOC107654320,LOC107562197,LOC107667012,LOC108437645 coding upstream 37675 31651505 ~ 31659662 (-)
si:ch211-283g2.2 NA coding upstream 47648 31661478 ~ 31667615 (-)
LOC122345089 NA coding upstream 54187 31668017 ~ 31671608 (-)
srrt srrt,LOC107665251,LOC107591506,LOC107725089,LOC107734366 coding upstream 60485 31674315 ~ 31683580 (-)
zgc:153704 zgc:153704,LOC107591480,LOC107562205,LOC107725160,LOC107665866,LOC107654290 coding upstream 119628 31733458 ~ 31735951 (-)
G40995 NA non-coding downstream 94128 31423085 ~ 31506097 (-)
LOC122345708 NA non-coding downstream 102131 31456500 ~ 31498094 (-)
G40996 NA non-coding downstream 104956 31435649 ~ 31495269 (-)
G40842 NA non-coding downstream 319794 31280177 ~ 31280431 (-)
G40841 NA non-coding downstream 327224 31272686 ~ 31273001 (-)
G41034 NA non-coding upstream 33028 31646858 ~ 31648612 (-)
G41023 NA non-coding upstream 41753 31655583 ~ 31701818 (-)
G41019 prdx4,LOC107665442,LOC107591478,LOC107734341,LOC107654298 non-coding upstream 70138 31683968 ~ 31684836 (-)
G41018 LOC107734365 non-coding upstream 78036 31691866 ~ 31695788 (-)
G41037 NA non-coding upstream 98521 31712351 ~ 31732259 (-)
LOC122344987 LOC107591496,LOC107663763,LOC107725109,LOC107734348,LOC107563429,LOC107654309 other downstream 249776 31331349 ~ 31350449 (-)
G40752 hspa5,LOC107686379,LOC107743071,LOC107687227,LOC107567952,LOC107734417,LOC107734415,LOC107686377 other downstream 773867 30817732 ~ 30826358 (-)
G40713 lzts3,LOC107567954,LOC107687254,LOC107574519,LOC795227,LOC107665914 other downstream 807506 30789633 ~ 30792719 (-)
G40711 NA other downstream 866865 30631028 ~ 30733360 (-)
fubp3 fubp3,LOC107689604,LOC107687236,LOC106566971 other downstream 987084 30590843 ~ 30613141 (-)
apooa apoo other upstream 88623 31702453 ~ 31711737 (-)
G41035 LOC107734367,LOC107665727,LOC107725151,LOC107591476,LOC107654325,LOC563292 other upstream 107440 31721270 ~ 31722906 (-)
tnca zmp:0000000846,LOC107715542,LOC107557573,LOC107591511,LOC102306937,LOC107725145 other upstream 500066 32113896 ~ 32174064 (-)
LOC122346090 LOC107704013,LOC107725152,LOC107748063,LOC107654332,LOC107557589,LOC107594564 other upstream 600201 32214031 ~ 32293782 (-)
LOC122346085 LOC107748069,LOC107679343,LOC107594586 other upstream 669707 32283537 ~ 32314631 (-)

Expression


Co-expression Network