LOC122344719 (c1qbp,LOC107725147,LOC107664384,LOC107654317,LOC107734359)


Basic Information

Item Value
gene id LOC122344719
gene name c1qbp,LOC107725147,LOC107664384,LOC107654317,LOC107734359
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 31594477 ~ 31598310 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238269.1
GGTGCAGAGCGCCGAGGTCACGGTGTCCTTCCCCACGTGTGCGCCAGTCTCAGTCAGTCGCAGTCGCAGTCCCGAGCTCGTCCGTCATGCTGAAGTCCGTAAGCCGCGTGGTTCAGTTCGCCGCCCGTCTGTCCGGCTCCGCGCCGCCCGCCCCGGCCGTTAGACCCGCGCTGCGCCTCAGCAGAGCCTTCACGAGATCCGTCTGGAGCCTGAGCCGCAGCGGAGCGGCGCCGGGGTCCAGGCCGAAGCTGCTCGCCGCGACGCGGGCTCTGCCCACGGTGTCGTGCGGCTGCGGGAGTCTGCACACCGAGGGCGATAAAGCGTTTGCAGAGTTTCTCACGGACGAAatcaaagaagaaaagaagatcCAGAAGAACAAGAGTCTTCCTAAAATGTCTGGAGGCTGGGAGCTGGAGCTCAACGGCACAGAGGCCAAACTCAGCCGCTCGCTGTCCGGAGAAAAAGTCACCATCACATTCAACGTGAACAACAGCATCCCGCCGCAGCTGGAGGAAGATCCTGAACACGCACAGAAGGGTCAGGAGGACGAGcctGAAATCGTGTCCTCGCCTAACTTCGTGGTTGAAGTGACCAAACCAGACGCCAAGAACTCCTTAGTGTTTGACTGTCATTTCCCCGAGGATGAGCTCTTTGTCTCCGAGCAGACTGGTCACGGTGACGGCGAGGAGGAGAGCGACATCTTTGCCATCCGAGAGGTCAGCTTCCAGCTGACGGGAGACACCGAGTGGAAGGAGACCAGTTACACGCTCAACACCGACTCTCTGGACTGGGCCCTGTATGACCATCTGATGGACTTCCTCGCTGACCGTGGCGTGGACAACACGTTTGCGGATGAGCTGATGGAGATGAGCACGGCCCTGGAGCATCAGGAGTACATCAAGTTCCTGGAAGACCTCAGCACTTTTGTCAAATGCAAATAATGTCTAGATTTAATCGCAGACTTCGATTGGTCTGACGCGAAGGCAGAagagttttgtatttaattttatatcatgTTTTCACGTTATGTGCGCACCGGTTACGTTTCAGACGCCGTCGCTGGGGTTCAGAGGAATTGAGAACGTGGACTGAACGTTAAGAGAAATAAAGGGCTGATTGTCTTGATTGATGccgaaagcaaaaaaaaattgtccgtttttgcatttaatttctaattaacAAACagttgcatttttcatttaatttcaaagtgGTTTGGAAGCCGTTTTTCTTTGTGTGCGTGACACTTCACTACAGACCGATCCAAAAGTGCAAacgtttacattttacacacaaacaggcttgtttttttttttttttgcattgtataaTACATTTGTCCAACATTCTtgtaaagtaaaattatattaatctGA
>XM_043238270.1
GTGCAGAGCGCCGAGGTCACGGTGTCCTTCCCCACGTGTGCGCCAGTCTCAGTCAGTCGCAGTCGCAGTCCCGAGCTCGTCCGTCATGCTGAAGTCCGTAAGCCGCGTGGTTCAGTTCGCCGCCCGTCTGTCCGGCTCCGCGCCGCCCGCCCCGGCCGTTAGACCCGCGCTGCGCCTCAGCAGAGCCTTCACGAGATCCGTCTGGAGCCTGAGCCGCAGCGGAGCGGCGCCGGGGTCCAGGCCGAAGCTGCTCGCCGCGACGCGGGCTCTGCCCACGGTGTCGTGCGGCTGCGGGAGTCTGCACACCGAGGGCGATAAAGCGTTTGCAGAGTTTCTCACGGACGAAatcaaagaagaaaagaagatcCAGAAGAACAAGAGTCTTCCTAAAATGTCTGGAGGCTGGGAGCTGGAGCTCAACGGCACAGAGGCCAAACTCAGCCGCTCGCTGTCCGGAGAAAAAGTCACCATCACATTCAACGTGAACAACAGCATCCCGCCGCAGCTGGAGGAAGATCCTGAACACGCACAGAAGGGTCAGGAGGACGAGcctGAAATCGTGTCCTCGCCTAACTTCGTGGTTGAAGTGACCAAACCAGACGCCAAGAACTCCTTAGTGTTTGACTGTCATTTCCCCGAGGATGAGACTGGTCACGGTGACGGCGAGGAGGAGAGCGACATCTTTGCCATCCGAGAGGTCAGCTTCCAGCTGACGGGAGACACCGAGTGGAAGGAGACCAGTTACACGCTCAACACCGACTCTCTGGACTGGGCCCTGTATGACCATCTGATGGACTTCCTCGCTGACCGTGGCGTGGACAACACGTTTGCGGATGAGCTGATGGAGATGAGCACGGCCCTGGAGCATCAGGAGTACATCAAGTTCCTGGAAGACCTCAGCACTTTTGTCAAATGCAAATAATGTCTAGATTTAATCGCAGACTTCGATTGGTCTGACGCGAAGGCAGAagagttttgtatttaattttatatcatgTTTTCACGTTATGTGCGCACCGGTTACGTTTCAGACGCCGTCGCTGGGGTTCAGAGGAATTGAGAACGTGGACTGAACGTTAAGAGAAATAAAGGGCTGATTGTCTTGATTGATGccgaaagcaaaaaaaaattgtccgtttttgcatttaatttctaattaacAAACagttgcatttttcatttaatttcaaagtgGTTTGGAAGCCGTTTTTCTTTGTGTGCGTGACACTTCACTACAGACCGATCCAAAAGTGCAAacgtttacattttacacacaaacaggcttgtttttttttttttttgcattgtataaTACATTTGTCCAACATTCTtgtaaagtaaaattatattaatctGA

Function

symbol description
c1qbp Predicted to be involved in mature ribosome assembly. Predicted to act upstream of or within adaptive immune response. Predicted to be located in mitochondrial matrix and plasma membrane. Is expressed in several structures, including alar plate midbrain region; digestive system; midbrain; musculature system; and segmental plate. Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 33. Orthologous to human C1QBP (complement C1q binding protein).

NR:

description
PREDICTED: complement component 1 Q subcomponent-binding protein, mitochondrial-like isoform X1

GO:

id name namespace
GO:0005759 mitochondrial matrix cellular_component

KEGG:

id description
K15414 C1QBP; complement component 1 Q subcomponent-binding protein, mitochondrial

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238269.1 True 1376 mRNA 0.52 6 31594477 31598310
XM_043238270.1 False 1357 mRNA 0.52 6 31594477 31598309

Neighbor

gene id symbol gene type direction distance location
LOC122344718 LOC107725156,LOC107654314,LOC107591470,LOC107734345,LOC100535945,LOC107562196 coding downstream 4080 31568780 ~ 31590397 (-)
srrm3 srrm3,LOC107591468,LOC107734356,LOC107562180,LOC107725131,LOC107654313 coding downstream 26793 31506479 ~ 31567684 (-)
hspb1 LOC107591466,LOC107667824,LOC107725127,LOC107562193,LOC107654311,LOC107734358 coding downstream 91447 31498489 ~ 31503030 (-)
LOC122345520 LOC107663881,LOC107725093,LOC107654310,LOC107734346,LOC107563427 coding downstream 139969 31369810 ~ 31454508 (-)
ca4a LOC107663683,LOC107654307,LOC107734368,LOC107719346 coding downstream 397510 31191163 ~ 31196967 (-)
LOC122344717 LOC107664759,LOC107725124,LOC107654315,LOC107734362,LOC107562201 coding upstream 1915 31600225 ~ 31613830 (-)
si:ch211-283g2.1 si:ch211-283g2.1,LOC107734371,LOC107591505,LOC107654320,LOC107562197,LOC107667012,LOC108437645 coding upstream 53195 31651505 ~ 31659662 (-)
si:ch211-283g2.2 NA coding upstream 63168 31661478 ~ 31667615 (-)
LOC122345089 NA coding upstream 69707 31668017 ~ 31671608 (-)
srrt srrt,LOC107665251,LOC107591506,LOC107725089,LOC107734366 coding upstream 76005 31674315 ~ 31683580 (-)
G40995 NA non-coding downstream 88380 31423085 ~ 31506097 (-)
LOC122345708 NA non-coding downstream 96383 31456500 ~ 31498094 (-)
G40996 NA non-coding downstream 99208 31435649 ~ 31495269 (-)
G40842 NA non-coding downstream 314046 31280177 ~ 31280431 (-)
G40841 NA non-coding downstream 321476 31272686 ~ 31273001 (-)
G41034 NA non-coding upstream 48548 31646858 ~ 31648612 (-)
G41023 NA non-coding upstream 57273 31655583 ~ 31701818 (-)
G41019 prdx4,LOC107665442,LOC107591478,LOC107734341,LOC107654298 non-coding upstream 85658 31683968 ~ 31684836 (-)
G41018 LOC107734365 non-coding upstream 93556 31691866 ~ 31695788 (-)
G41037 NA non-coding upstream 114041 31712351 ~ 31732259 (-)
LOC122344987 LOC107591496,LOC107663763,LOC107725109,LOC107734348,LOC107563429,LOC107654309 other downstream 244028 31331349 ~ 31350449 (-)
G40752 hspa5,LOC107686379,LOC107743071,LOC107687227,LOC107567952,LOC107734417,LOC107734415,LOC107686377 other downstream 768119 30817732 ~ 30826358 (-)
G40713 lzts3,LOC107567954,LOC107687254,LOC107574519,LOC795227,LOC107665914 other downstream 801758 30789633 ~ 30792719 (-)
G40711 NA other downstream 861117 30631028 ~ 30733360 (-)
fubp3 fubp3,LOC107689604,LOC107687236,LOC106566971 other downstream 981336 30590843 ~ 30613141 (-)
apooa apoo other upstream 104143 31702453 ~ 31711737 (-)
G41035 LOC107734367,LOC107665727,LOC107725151,LOC107591476,LOC107654325,LOC563292 other upstream 122960 31721270 ~ 31722906 (-)
tnca zmp:0000000846,LOC107715542,LOC107557573,LOC107591511,LOC102306937,LOC107725145 other upstream 515586 32113896 ~ 32174064 (-)
LOC122346090 LOC107704013,LOC107725152,LOC107748063,LOC107654332,LOC107557589,LOC107594564 other upstream 615721 32214031 ~ 32293782 (-)
LOC122346085 LOC107748069,LOC107679343,LOC107594586 other upstream 685227 32283537 ~ 32314631 (-)

Expression


Co-expression Network