eif1axa (eif1axb,EIF1AX,eif1ax,LOC102359197,LOC107726370)


Basic Information

Item Value
gene id eif1axa
gene name eif1axb,EIF1AX,eif1ax,LOC102359197,LOC107726370
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 11041140 ~ 11044571 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238299.1
GTGGATTATTGCGTAGGCGgaagtttttagaaaaaaacggGAATTATTTAAGTCGAAATTTAacgtttctttatttaaatactttgttACACGACATCATCGAGCAAAGACAGCAGCGCTTGTAATTCGAACATGCCAAAGAATAAAGGCAAAGGAGGTAAAAATCGGCGGCGTGGTAAGAACGAGAATGAGTCTGAGAAGAGAGAGCTGGTTTTCAAGGAGGATGGCCAGGAATATGCTCAGGTGATAAAGATGTTGGGAAATGGACGGCTAGAGGCCACATGCTTTGATGGGGTCAAGCGACTGTGCCACATCCGAGGAAAGCTCCGGAAAAAGGTCTGGATCAACACTTCTGACATAATCCTTATTGGTCTTAGAGATTACCAgGATACCAAAGcagatgtcattttaaagtacaATGCAGATGAGGCCCGCAGTCTTAAAGCCTATGGAGAGCTTCCCGAACACGctaAAATCAATGAAACTGACACATTTGGACCTGGAGACGACGATGAGATTCAGTTTGATGATATTGGGAGTGACGATGAGGACATTGATGATATCTGAGTCACGACTGCTGGTGGTTTATATTGTTTACACTGTGAGGAGAGAAAACGCTCGtgttgggggaaaaaatgcagTTTGGGCATAACTGAGGCCCCATATCATACTGCAGCCTCCCTCAGAGGAACACTCAGAGGCTTACTGCtcatctctgtctgtttttctctctttctttcttctctctttctctctctctacctctacCTCTCCAGTGCATAGTCTCACTACAGGTCTTCTCCGAGCACTCTATCACCACAATCGTGCCCTTTCTCATTCAGTGCCAACCACACAACATAGACTGCgtagttttgtaattttaaagtatttatattgtattccACTGTATGTGGTggaatttaaaatacaaagaaatttacaataaaaagtcAAGCCTTTTA

Function

symbol description
eif1axb Predicted to enable translation initiation factor activity. Acts upstream of or within erythrocyte maturation; regulation of hemoglobin biosynthetic process; and regulation of production of miRNAs involved in gene silencing by miRNA. Predicted to be active in cytoplasm. Orthologous to human EIF1AX (eukaryotic translation initiation factor 1A X-linked).
eif1ax Enables RNA binding activity. Predicted to be involved in translational initiation. Predicted to be located in cytosol. Predicted to be active in cytoplasm.

NR:

description
PREDICTED: eukaryotic translation initiation factor 1A, X-chromosomal

GO:

id name namespace
GO:0006413 translational initiation biological_process
GO:0005829 cytosol cellular_component
GO:0003743 translation initiation factor activity molecular_function

KEGG:

id description
K03236 EIF1A; translation initiation factor 1A

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238299.1 True 962 mRNA 0.42 7 11041140 11044571

Neighbor

gene id symbol gene type direction distance location
rps6ka3a rps6ka3a,LOC107687667,LOC107599949,LOC107726369,LOC107672778,LOC107592284 coding upstream 18 11029087 ~ 11041122 (+)
pdha1a pdha1a,LOC107599948,LOC107672749,LOC107592287,LOC107726384 coding upstream 13135 11020321 ~ 11028005 (+)
si:ch211-114c12.5 LOC107592362,LOC107726358,LOC107744476,LOC107599968,LOC107672711 coding upstream 48255 10986905 ~ 10992885 (+)
capga capga,LOC107599981,LOC107687675,LOC107744500,LOC107726365,LOC107592395,LOC107672725 coding upstream 55092 10981587 ~ 10986048 (+)
mrps31 NA coding upstream 68826 10969502 ~ 10972314 (+)
LOC122345703 LOC107687703,LOC107599954,LOC107672740,LOC107747828,LOC107592360,LOC107599982,LOC107687702,LOC107747827 coding downstream 29319 11073890 ~ 11099337 (+)
LOC122345519 LOC107747818,LOC107687663,LOC107599955,LOC107680407,LOC107726394 coding downstream 65210 11109781 ~ 11124349 (+)
LOC122346179 LOC107747816,LOC107597221,LOC107687664,LOC107592359,LOC107732598 coding downstream 82556 11127127 ~ 11136085 (+)
rnf128a rnf128a,LOC107592278,LOC107687662,LOC107732618,LOC107680400,LOC107747815 coding downstream 109968 11154539 ~ 11169552 (+)
tbc1d8b tbc1d8b,si:dkey-110k5.6 coding downstream 125642 11170213 ~ 11186674 (+)
G35229 NA non-coding upstream 21948 10945056 ~ 11019192 (+)
G35202 NA non-coding upstream 202773 10838012 ~ 10838367 (+)
G35197 NA non-coding upstream 224839 10813457 ~ 10816301 (+)
G35081 NA non-coding upstream 493515 10547221 ~ 10547625 (+)
G35043 NA non-coding upstream 707332 10333219 ~ 10333808 (+)
G35267 NA non-coding downstream 142683 11187254 ~ 11187694 (+)
G35274 kat5,LOC106563454,LOC107597226 non-coding downstream 159929 11204500 ~ 11209405 (+)
G35304 prps1a,LOC103031347,LOC107733231,LOC107597240,LOC107672505 non-coding downstream 338099 11382670 ~ 11387170 (+)
G35309 NA non-coding downstream 360957 11405528 ~ 11405761 (+)
G35311 NA non-coding downstream 369470 11414041 ~ 11414688 (+)
senp3a senp3a,LOC107744451,LOC107687680,LOC107599939,LOC107672741,LOC107592295,LOC107726393 other upstream 107387 10926823 ~ 10933753 (+)
osbp2b si:ch211-106a19.1,LOC107687692,LOC107744438,LOC107726355,LOC107672777,LOC107592367 other upstream 305081 10717531 ~ 10736059 (+)
fam219ab fam219ab,LOC107744421,LOC107595023,LOC107673386,LOC107752501,LOC107672754,LOC107592322,LOC107673387,LOC107595025,LOC107744422,LOC107592323 other upstream 901407 10064217 ~ 10139733 (+)
si:ch211-102c2.4 NA other upstream 1241782 9796381 ~ 9799358 (+)
man1b1b man1b1b,man1b1,LOC107709694,LOC107681241,LOC107560236,LOC107757969,LOC107690671,LOC107587425 other upstream 2169622 8864202 ~ 8871518 (+)
map7d2a LOC107687666,LOC107592282,LOC107599951,LOC107754729,LOC107726367,LOC107672739 other downstream 1908 11046479 ~ 11064446 (+)
LOC122346180 LOC107597222,LOC107680408,LOC107732624,LOC107592391,LOC107732598,LOC107687664,LOC107747817,LOC107687696 other downstream 91652 11136223 ~ 11150225 (+)
gria3a gria3a,LOC107597231,LOC107672342,LOC107732609,LOC107680378,LOC107733225,LOC107592272 other downstream 222071 11266642 ~ 11303431 (+)
glra4b glra4b,LOC107741187,LOC107565418,LOC107680382,LOC108442052,LOC108259905 other downstream 593945 11638516 ~ 11652683 (+)
smarca1 smarca1,LOC107597262,LOC107672796,LOC107741199,LOC107663213,LOC103034185,LOC105028962,LOC105893234,LOC106603320 other downstream 879657 11924228 ~ 11943110 (+)

Expression


Co-expression Network