ttll11 (ttll11,LOC107700937,LOC107596909,LOC100002237,LOC107693816)


Basic Information

Item Value
gene id ttll11
gene name ttll11,LOC107700937,LOC107596909,LOC100002237,LOC107693816
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 6763136 ~ 6792026 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238322.1
TTGCTGCCGTGTGCCTCTAAGGCTTCCGTTAGCTGCGTTGCGTTGTCAACAGGACCAAAACACCAGCAGCTCACAGGACCTTTACTTCCAGACTGTCCGCTGGCCGTCAGCTGACACTTCACCCGTCCGCCTCCGTTATCTCTGCCGCGTCTCAGCGAACAGCGGGTGAACGCGAGGCACGCGATGTTTTCATTCGGAGAAACGACGTCCGTTTAAAAGCGCGAGAGCTGTCGGTGCACCTCACCGGCACTTTAAAACTGACCGAAACTGACAGGGGGAATGCGGTGATGCGTCCAGCCATGCCCTGCGCTCGTCTTCCTCACATTTATACCGCGATATGTGATGTTAGTTGAGTGTTGCTTTATAGAGAATGGGATGAACTAGGTACAGTTACATTCATATGCAGCTGGTGGTATTGTTGTAGATAGTTAAGAACATCTTTTGCCATTAAAAGCATTCCGTGCAGCTCTCGCGTCCCCTGTCCCGTTATATCACCGTCAAAAATACCCCGCACGCCGAAGTGATGCGTTATCTGTCAGTGCTAATAACGTTCAGATTGTGATCATGGAGTCGGCGCGTCTTCACGCTAGTTTGTCAGTCTCTATAGTTGGCTTTTACAGAtcgattttctgtttttgcgCTTTAGTTCGGACAGCAGGTGCCGGTGCTTGTTAGCACCTCATGCTAGTAGATTATCCTTAAACATTCGTCAAATCTAAATGAGATAACAAACAATCCGACCATTAGCTAACACTATGAGCGATCACTATGAGAGGGTGAAGATCGAACTCCAGCAGATGAAGGAGGTGGAGAACGAGGCCGCGGCCGACGAGGAGCAGCTGTCCCCGGCCTCGGTCTCGCCAGTCCCCGCTGACCTTTCCTTCACTGCTCGGAGAGACCCGTCCAAAAGTAGCATCAACGGGAGAAGTCGGAGTAAAAGTAGGAGCAAAGCGGACGCGCACGAGAGACAGGTGAACGGTAAGCAACCGACGGATCCGGCGCCGCAAGGACAGAGGCGTGTAAGCAACGAGCCGAACCTTCACGTTAAAGGTACGGCGAGGCTTTTAAAGGTTAAAACGGCGGCAAACGGTCACGTCGAGTCAGgcaagagacagacagatgggaAGTGTGAGCATCACGGCAAAGAGGACGAGAGCAAAGCGGCcaaaaagagaaaagctgtGACGGTGGACACCTCCAAGGCAAAGACGTCTCTGGAGGCGCTGAAGATGAGCATCAGGCAGCTGAAGTGGAAAGAGTTTCCGATGGGTAGGCGGACAGCCTGTGATATCTACTGGCATGGCGTCTCTTTTCACGACAACGAGAACATCAACTCTGGGCAAGTCAACAAATTCCCAGGAATGATAGAGATGCTGCGGAAGATAAACCTGAGTCGTGCGGTGCGTACCATGCAGGAGCTGTTCCCGGAGGAGTACAACTTCTACCCACGTTCCTGGATACTGCCTGAGGAATTCCAACTCTTTTCCACACAGattcgtCTTCTGAAAGATAATGATTCAACCCTTAAACCCACTTTTATCGTCAAACCGGACAGCGGATCCCAGGGCGATGGCATCTACCTCATCCGTGACCCTGCTGACCTTCGGGTCATCTCAGGTTCTCAGATCAAACAAGCAGTTGTTCAAGAATACATCCAGAAACCCCTGCTCATCGATAAATTGAAGTTTGATATCCGCCTGTACGTTCTGGTCCGCTCGTTGGAGCCTCTAGAAATCTACATCGCTAAAGAGGGTCTTTCCAGGTTCTGCACAGAACCCTACCAAGAACCCAGCCAGAAGAACCTTAGTCATGTTTTTATGCACCTCACCAACTATTCCCTTAATGTGCACAGCGGGAACTTTGTTCACTCCGACAGCTGCAGCACGGGCAGTAAACGCACGTTCTCTAGCGTTCTCTATCGCCTGGCATCTAAAGGAGTGGACATCAAGAAGGTCTGGTCAGACATTATCGCTTTGGTTATCAAGACAGTAATTGCACTCGTGCCTGAACTAAAGGTGTATTATCAGGCAGATATACCACCTGGAAAACCAGGGCCGACATGTTTTCAGATCCTGGGCTTTGATATCCTGCTGATGAAAAACTTGAAGCCTGTTTTATTAGAGGTCAATGCCAATCCCAGCATGAGGATTGAACATGAACAGGAGGTGTCACCTGGTGTGTTTGAATATGTCCCGAGTCCAGTAGATGAAGAGGTGAAGGTGGGTGTGATCAGAGACACGCTGCGGCTCATGGACCCGGCTCAGAGAAAACAACACGTAACGTCAAGTACAGGGGGCGGTTCACCAGAAGAAGCTATTGTTGtggaaacaggaagtgatgagAAAGAAGGCTTGGCAGATTCCCTTCCATCTTTGTGCTTAAAGCAAGTCTTCCCTAAATACACCAAGCAGTTTAATTACTTGCGGGTCGTGGAACGCATCGCTGGCATTTTCCTGCGCTTCCTCGGTGTCAAAGGAACCATGAGACTGGGTCCGACCAGCTTCCGCACCTTCATCAGGAACTGCAAGCTGAGTAACAGCAGCTTCTCGATGGCTTCAGCGGACATCCTGTACATCGACATCACGCGTCGCTGGGCTGGAATGCTCCCCGACTCCAGAGAGGCAGgaaTGTGTCTTCAGGCATTTATTGAGGCCTTCTTTTACTTGGCAGCACGCAGGTTCAAGGCTTTACCGCTGCGGGAGCAGGTGCTCTTGCTGCTGGAGATTTGTGAAGGGGCCCTCGAGGGCCAGAGCCACAGTGAGAAGCCACGGCCACACCGAACGCACGCAAACCCCGCCTCTTCTCAATCATCAGCGCCAACCACGTTCAGCTCGCCCGCAATGACGCGGCGACGCCATCGGCCGCTGCAACTCTCTGCTAAAGCAAACACAGAGAACTgacaatctcacacacacacacacacacacgtcttcTGAGGAACTTCCAGAGGGCCACGCAGTgtgcttttgaataaaaaacagaaGGCAGAATAATGAATCGAAATTAAATCATTCACCCCTAGCTCTGCGCGCAAGCTAAAGTTGAATTGTTTATACGCAGCTCAGATGAAGCTATTTCTTTCACCACACTACACAGACAAATGTAACAGGATATTTGTACACTGACACTAAATGTGTAGACGGCTCGGCTTGTGTCGCGTAGCTCTTTGCTTACCTTCAGGTAATGTTGGTAGGATTCGTGGGAATCGATCACTGCAGGGATAAATATCACGGGATTCAATGTTTCTTAAAGGGACGAGATGTTGTCGTAACACGACTTCAGAAAAAGCAGCTAATTTTCTCAAATGGCTACCTTCAACTGACTAGGCAGAACAACACGGTGGCCTTTTGTTAGTAAAAATGGTGTTAACACCAGGACATGGCACCAAGTGCACTCGAAGTTTACCAagttgtgtattatttataccaaaagagatttatttattgtttttcacttAACCGAGTCATTTGCCGTAGCTGCGACTTGTCCGAACCGCTcctgcatgtaaaaaaaaaaaaatgagaggaggaggaaaaaaagagtttgcTGTGGTTTAATGCAAGTGGACATCTCGCAAGATTAGCACATATTTACACAGATCATTTAACCCTCGTTTAATATCACATTGCAGCTGCAGGCATCGACATATAAAATTAGGCTTGACTGAGATGTACTTTTTATGGACATGTTGAATAAATATTgcacttaaaatatta
>XM_043238323.1
TGTTGCTGCCGTGTGCCTCTAAGGCTTCCGTTAGCTGCGTTGCGTTGTCAACAGGACCAAAACACCAGCAGCTCACAGGACCTTTACTTCCAGACTGTCCGCTGGCCGTCAGCTGACACTTCACCCGTCCGCCTCCGTTATCTCTGCCGCGTCTCAGCGAACAGCGGGTGAACGCGAGGCACGCGATGTTTTCATTCGGAGAAACGACGTCCGTTTAAAAGCGCGAGAGCTGTCGGTGCACCTCACCGGCACTTTAAAACTGACCGAAACTGACAGGGGGAATGCGGTGATGCGTCCAGCCATGCCCTGCGCTCGTCTTCCTCACATTTATACCGCGATATGTGATGTTAGTTGAGTGTTGCTTTATAGAGAATGGGATGAACTAGGTACAGTTACATTCATATGCAGCTGGTGGTATTGTTGTAGATAGTTAAGAACATCTTTTGCCATTAAAAGCATTCCGTGCAGCTCTCGCGTCCCCTGTCCCGTTATATCACCGTCAAAAATACCCCGCACGCCGAAGTGATGCGTTATCTGTCAGTGCTAATAACGTTCAGATTGTGATCATGGAGTCGGCGCGTCTTCACGCTAGTTTGTCAGTCTCTATAGTTGGCTTTTACAGAtcgattttctgtttttgcgCTTTAGTTCGGACAGCAGGTGCCGGTGCTTGTTAGCACCTCATGCTAGTAGATTATCCTTAAACATTCGTCAAATCTAAATGAGATAACAAACAATCCGACCATTAGCTAACACTATGAGCGATCACTATGAGAGGGTGAAGATCGAACTCCAGCAGATGAAGGAGGTGGAGAACGAGGCCGCGGCCGACGAGGAGCAGCTGTCCCCGGCCTCGGTCTCGCCAGTCCCCGCTGACCTTTCCTTCACTGCTCGGAGAGACCCGTCCAAAAGTAGCATCAACGGGAGAAGTCGGAGTAAAAGTAGGAGCAAAGCGGACGCGCACGAGAGACAGGTGAACGGTAAGCAACCGACGGATCCGGCGCCGCAAGGACAGAGGCGTGTAAGCAACGAGCCGAACCTTCACGTTAAAGGTACGGCGAGGCTTTTAAAGGTTAAAACGGCGGCAAACGGTCACGTCGAGTCAGgcaagagacagacagatgggaAGTGTGAGCATCACGGCAAAGAGGACGAGAGCAAAGCGGCcaaaaagagaaaagctgtGACGGTGGACACCTCCAAGGCAAAGACGTCTCTGGAGGCGCTGAAGATGAGCATCAGGCAGCTGAAGTGGAAAGAGTTTCCGATGGGTAGGCGGACAGCCTGTGATATCTACTGGCATGGCGTCTCTTTTCACGACAACGAGAACATCAACTCTGGGCAAGTCAACAAATTCCCAGGAATGATAGAGATGCTGCGGAAGATAAACCTGAGTCGTGCGGTGCGTACCATGCAGGAGCTGTTCCCGGAGGAGTACAACTTCTACCCACGTTCCTGGATACTGCCTGAGGAATTCCAACTCTTTTCCACACAGattcgtCTTCTGAAAGATAATGATTCAACCCTTAAACCCACTTTTATCGTCAAACCGGACAGCGGATCCCAGGGCGATGGCATCTACCTCATCCGTGACCCTGCTGACCTTCGGGTCATCTCAGGTTCTCAGATCAAACAAGCAGTTGTTCAAGAATACATCCAGAAACCCCTGCTCATCGATAAATTGAAGTTTGATATCCGCCTGTACGTTCTGGTCCGCTCGTTGGAGCCTCTAGAAATCTACATCGCTAAAGAGGGTCTTTCCAGGTTCTGCACAGAACCCTACCAAGAACCCAGCCAGAAGAACCTTAGTCATGTTTTTATGCACCTCACCAACTATTCCCTTAATGTGCACAGCGGGAACTTTGTTCACTCCGACAGCTGCAGCACGGGCAGTAAACGCACGTTCTCTAGCGTTCTCTATCGCCTGGCATCTAAAGGAGTGGACATCAAGAAGGTCTGGTCAGACATTATCGCTTTGGTTATCAAGACAGTAATTGCACTCGTGCCTGAACTAAAGGTGTATTATCAGGCAGATATACCACCTGGAAAACCAGGGCCGACATGTTTTCAGATCCTGGGCTTTGATATCCTGCTGATGAAAAACTTGAAGCCTGTTTTATTAGAGGTCAATGCCAATCCCAGCATGAGGATTGAACATGAACAGGAGGTGTCACCTGGTGTGTTTGAATATGTCCCGAGTCCAGTAGATGAAGAGGTGAAGGTGGGTGTGATCAGAGACACGCTGCGGCTCATGGACCCGGCTCAGAGAAAACAACACGTAACGTCAAGTACAGGGGGCGGTTCACCAGAAGAAGCTATTGTTGtggaaacaggaagtgatgagAAAGAAGGCTTGGCAGATTCCCTTCCATCTTTGTGCTTAAAGCAAGTCTTCCCTAAATACACCAAGCAGTTTAATTACTTGCGGGTCGTGGAACGCATCGCTGGCATTTTCCTGCGCTTCCTCGGTGTCAAAGGAACCATGAGACTGGGTCCGACCAGCTTCCGCACCTTCATCAGGAACTGCAAGCTGAGTAACAGCAGCTTCTCGATGGCTTCAGCGGACATCCTGTACATCGACATCACGCGTCGCTGGGCTGGAATGCTCCCCGACTCCAGAGAGGCAGCACGCAGGTTCAAGGCTTTACCGCTGCGGGAGCAGGTGCTCTTGCTGCTGGAGATTTGTGAAGGGGCCCTCGAGGGCCAGAGCCACAGTGAGAAGCCACGGCCACACCGAACGCACGCAAACCCCGCCTCTTCTCAATCATCAGCGCCAACCACGTTCAGCTCGCCCGCAATGACGCGGCGACGCCATCGGCCGCTGCAACTCTCTGCTAAAGCAAACACAGAGAACTgacaatctcacacacacacacacacacacgtcttcTGAGGAACTTCCAGAGGGCCACGCAGTgtgcttttgaataaaaaacagaaGGCAGAATAATGAATCGAAATTAAATCATTCACCCCTAGCTCTGCGCGCAAGCTAAAGTTGAATTGTTTATACGCAGCTCAGATGAAGCTATTTCTTTCACCACACTACACAGACAAATGTAACAGGATATTTGTACACTGACACTAAATGTGTAGACGGCTCGGCTTGTGTCGCGTAGCTCTTTGCTTACCTTCAGGTAATGTTGGTAGGATTCGTGGGAATCGATCACTGCAGGGATAAATATCACGGGATTCAATGTTTCTTAAAGGGACGAGATGTTGTCGTAACACGACTTCAGAAAAAGCAGCTAATTTTCTCAAATGGCTACCTTCAACTGACTAGGCAGAACAACACGGTGGCCTTTTGTTAGTAAAAATGGTGTTAACACCAGGACATGGCACCAAGTGCACTCGAAGTTTACCAagttgtgtattatttataccaaaagagatttatttattgtttttcacttAACCGAGTCATTTGCCGTAGCTGCGACTTGTCCGAACCGCTcctgcatgtaaaaaaaaaaaaatgagaggaggaggaaaaaaagagtttgcTGTGGTTTAATGCAAGTGGACATCTCGCAAGATTAGCACATATTTACACAGATCATTTAACCCTCGTTTAATATCACATTGCAGCTGCAGGCATCGACATATAAAATTAGGCTTGACTGAGATGTACTTTTTATGGACATGTTGAATAAATATTgcacttaaaatatta

Function

symbol description
ttll11 Predicted to enable tubulin binding activity and tubulin-glutamic acid ligase activity. Predicted to be involved in microtubule cytoskeleton organization and protein polyglutamylation. Predicted to act upstream of or within cellular protein modification process. Predicted to be active in cilium. Orthologous to human TTLL11 (tubulin tyrosine ligase like 11).

NR:

description
tubulin polyglutamylase TTLL11

GO:

id name namespace
GO:0006464 cellular protein modification process biological_process

KEGG:

id description
K16604 TTLL11; tubulin polyglutamylase TTLL11

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238322.1 True 3716 mRNA 0.49 9 6763136 6792024
XM_043238323.1 False 3673 mRNA 0.49 9 6763136 6792026

Neighbor

gene id symbol gene type direction distance location
lamc3 lamc3,LOC107596886,LOC107718641,LOC107700933,LOC107757520,LOC107570860 coding downstream 419521 6282774 ~ 6343615 (-)
aif1l aif1l,LOC107718642,LOC107570864,LOC107757519,LOC107596876 coding downstream 481741 6265737 ~ 6281395 (-)
gfm2 gfm2 coding downstream 499834 6255418 ~ 6263302 (-)
enc1 enc1,LOC107655934,LOC107757521,LOC107570861,LOC107700930,LOC107596864 coding downstream 519318 6232266 ~ 6243818 (-)
ankra2 ankra2,LOC107757524,LOC107655931,LOC107596806,LOC107718646,LOC107700928,LOC107596181 coding downstream 663435 6096157 ~ 6099701 (-)
LOC122344933 NA coding upstream 36089 6828115 ~ 6830827 (-)
LOC122345679 NA coding upstream 43857 6835883 ~ 6839683 (-)
LOC122345680 LOC107710746 coding upstream 48692 6840718 ~ 6842727 (-)
ptges ptges,LOC107710751,LOC107693847,LOC107598231,LOC107691017,LOC107726289,LOC107587481 coding upstream 125839 6917865 ~ 6921619 (-)
med22 med22,LOC107710756,LOC107691021,LOC107596962,LOC107726295,LOC107693846,LOC107587409 coding upstream 153488 6945514 ~ 6949315 (-)
G33683 LOC107588773 non-coding downstream 150081 6611740 ~ 6613055 (-)
G33681 NA non-coding downstream 151644 6609449 ~ 6611492 (-)
G33615 NA non-coding downstream 584465 6178172 ~ 6178671 (-)
G33612 NA non-coding downstream 589023 6173847 ~ 6174113 (-)
G33610 NA non-coding downstream 590724 6172144 ~ 6172412 (-)
G33768 NA non-coding upstream 43933 6835959 ~ 6858383 (-)
G33791 rpl7a,LOC100194725 non-coding upstream 157518 6949544 ~ 6952310 (-)
G33802 ccbl1,LOC107691018,LOC107731000,LOC107587404,LOC107596979,LOC107726298 non-coding upstream 168249 6960275 ~ 6961261 (-)
G33803 NA non-coding upstream 171929 6963955 ~ 6964175 (-)
G33804 NA non-coding upstream 172234 6964260 ~ 6964511 (-)
G33175 NA other downstream 2140078 4622490 ~ 4623058 (-)
LOC122346168 srrm4,LOC107720865,LOC107702227,LOC107561260,LOC107656798 other downstream 2570055 4144856 ~ 4193081 (-)
piwil2 piwil2,LOC107560971,LOC107707823,LOC107702219 other downstream 2864558 3878650 ~ 3898578 (-)
coq5 coq5,LOC107560969,LOC107707852,LOC107656810,LOC107561264,LOC107702223,LOC107707851,LOC107560965,LOC101158254,LOC107755815,LOC107561265 other downstream 3010372 3744675 ~ 3752764 (-)
G32908 sema4c,LOC107697240,LOC107708238,LOC107699920 other downstream 3802959 2951462 ~ 2960177 (-)
G33758 LOC107596916,LOC107710760,LOC107700938,LOC107587412,LOC107693817 other upstream 32145 6824171 ~ 6826182 (-)
usp20 usp20,LOC107691016,LOC107693839,LOC107710745 other upstream 130820 6922846 ~ 6943203 (-)
G33998 LOC108444092 other upstream 590320 7382346 ~ 7397153 (-)
LOC122345606 LOC107712378 other upstream 914944 7706970 ~ 7711824 (-)
si:dkey-220k22.3 NA other upstream 926539 7718565 ~ 7721758 (-)

Expression


Co-expression Network