ctsll (LOC107744447,LOC107599936,LOC107726378,LOC107687684,LOC107592300,LOC107672789)


Basic Information

Item Value
gene id ctsll
gene name LOC107744447,LOC107599936,LOC107726378,LOC107687684,LOC107592300,LOC107672789
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 10887152 ~ 10889785 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238338.1
TGAGAGGCCGCTTTTTTTGATCAAACGTGCTTTAAAACCCTCTCAGTTGTAAATAATGACGGTTAATAATTTTGTTCGTTGGTTGAAGTCTTCCAGGCAGGATGATGATTGCCTCGCTCCTCACGCTATGCTTGAGTGCAGCGTTTGCTGCTCCGAGCTTAAACCGGCAGTTAGACGATCACTGGCAGCTCTGGAAGAGCTGGCATGGAAAAAACTATCACGAGAAAGAAGAGGGCTGGAGAAGACTGGTGTGGGAGAAGAACTTGAGGAAAATTGAGTTGCACAACATTGAGCACTCTGTGGGCAAACACACTTTTCGATTGGGCATGAACCAATTTGGCGATATGACAAATGAGGAGTTCAGACAGTCGATGAATGGTTACAATCATGACCCCAGTCAAAAATCAAAAGGCTCATTGTTCATGGAACCCAGCTTTTTTGAAGCCCCTCAGCAGGTTGACTGGAGAGAGAAGGGTTATGTTACTCCTATCAAAGACCAAAAACGCTGTGGCTCTTGCTGGGCTTTCAGTTCAACAGGTGCATTGGAGGGTCAGCTGTTCCGTAAAACTGGAAAGCTGGTTTCTCTGAGTGAACAAAACTTGATGGACTGTTCTAGGCCAGAAGGCAATCAAGGCTGTGATGGAGGCCTCATGGACCAGGCTTTCCAGTATGTTCAGGACAACAATGGGCTAGATACAGAGGAGTCCTATCCCTACCTTGGAACGgatGGTCAACCATGCCGCTATGACCCTCGTTATAATGCAGCTAATGACACTGGTTTTGTGGACATTCCCAGTGGTAAAGAACATGCTTTAATGAGGGCTGTTGCTGCTGTGGGTCCTGTAGCTGTTGCTATTGATGCTGCACATGAATCCTTCCAGTTCTATCAGTCTGGCATCTATTATGAAAGGGAGTGCAGCAGTGAAGAACTTGACCATGGAGTTCTGGTAGTTGGTTATGGTTATGAAGGTGCTGATGTTGCTGGAAAGAGATACTGGATTGTAAAAAACAGCTGGACCGAGAAATGGGGTGACAAAGGTTATATCTACATGGCTAAAGACCGACAGAACCATTGTGGCATTGCGACATCTGCCAGCTATCCTCTAGTGTAAGGCCACTGGACTGTTCTCTGCATTCTGGAAATGCCAGTTCACtactttttgttattaatttttcatgccgttttattttttaattgcataatttttttttaatgcttgttaCTTCTATTTTTAAGTAAGTTTTAGTCTTGAAGAATGCTAGTATATTATAGTTTCTTCTAATGAAGTTCTGTTGAATGCACTAATCAAATGGCTGCTCTTTTGTGGTCCACTTGTATTTCAAGCTTAATCTTTTGAGCAATGTTACAGATGTGAACATGCTCCTttcaaatgttacattatatttgtaTGAATTGTGCTCTCTGTAAGTGGATAAAAATTGTATCTACTGGTGTAGAAAGCGGAGCATTTTACGCATGGGATCTCTTGAGAACATGGTCCCAAAGACCCAAATATGGTATGTTAGGAGTTAAGACTGAAAATCTGTTcaaccatgatttttttttttttttttttttttggctgaaaatTACTGTACTACATCAATAATAAAGCTTTGTAATGGACA

Function

NR:

description
PREDICTED: cathepsin L1-like isoform X1

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0008234 cysteine-type peptidase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238338.1 True 1629 mRNA 0.42 8 10887152 10889785

Neighbor

gene id symbol gene type direction distance location
dgcr8 dgcr8,LOC107592303,LOC107726381,LOC107672729,LOC107687688,LOC107744441 coding downstream 125927 10753401 ~ 10761225 (-)
atp6v0a2b atp6v0a2b,atp6v0a2,LOC107687687,LOC107726380,LOC107744440,LOC107672728 coding downstream 137910 10738969 ~ 10749242 (-)
rhbdd3 rhbdd3,LOC107744491,LOC107673375,LOC107599928,LOC107592310,LOC107730717,LOC107672772 coding downstream 275610 10609022 ~ 10611542 (-)
mrpl41 LOC107744490,LOC107730714,LOC107672724,LOC107592314,LOC107673372,LOC107599924 coding downstream 353562 10531654 ~ 10533590 (-)
paxx zgc:193538,LOC107599923,LOC107673439,LOC107592313,LOC107730722,LOC107672790 coding downstream 360114 10524885 ~ 10527038 (-)
LOC122344793 NA coding upstream 1057 10890842 ~ 10893594 (-)
zdhhc23a LOC107744494,LOC107599976,LOC107687708,LOC107592365,LOC107672710 coding upstream 4367 10894152 ~ 10900274 (-)
atp6v1aa atp6v1a,atp6v1aa,LOC107672757,LOC107592296,LOC107599937,LOC107687683 coding upstream 19113 10908898 ~ 10918493 (-)
mpdu1a LOC107744454,LOC107687704,LOC107592396,LOC107726364,LOC107599967,LOC107672744 coding upstream 63985 10953770 ~ 10957971 (-)
si:ch211-114c12.2 si:ch211-114c12.2,LOC107744458,LOC107687673,LOC107592292,LOC107672733,LOC107726373,LOC107599944 coding upstream 83428 10973213 ~ 10979926 (-)
LOC122346117 NA non-coding downstream 414 10875648 ~ 10886738 (-)
G35203 NA non-coding downstream 48855 10838005 ~ 10838297 (-)
G35201 NA non-coding downstream 53557 10832858 ~ 10833595 (-)
G35194 NA non-coding downstream 96780 10766861 ~ 10790372 (-)
G35189 NA non-coding downstream 135248 10751335 ~ 10751904 (-)
G35385 NA non-coding upstream 42565 10932350 ~ 10933745 (-)
G35388 NA non-coding upstream 48910 10938695 ~ 10939486 (-)
G35410 NA non-coding upstream 148905 11038690 ~ 11039232 (-)
G35422 map7d2a,LOC107754729,LOC107687666,LOC107599951,LOC107726367 non-coding upstream 171153 11060938 ~ 11062888 (-)
G35423 NA non-coding upstream 173115 11062900 ~ 11064447 (-)
G35371 znf703,LOC107599934,LOC107672788,LOC107744445,LOC107687685,LOC107726392,LOC107592299 other downstream 13088 10868364 ~ 10874064 (-)
G35122 NA other downstream 425443 10461208 ~ 10461709 (-)
si:dkey-96l17.6 si:dkey-96l17.6,LOC107672751,LOC107738297,LOC107592400,LOC107744487,LOC108434467,LOC105902719 other downstream 551809 10324959 ~ 10335343 (-)
G34789 vps37b,LOC107594993,LOC107673398,LOC107656485,LOC107587312,LOC107709855,LOC107721558 other downstream 1484529 9337828 ~ 9402623 (-)
vamp5 LOC107594989,LOC107681225 other downstream 1666624 9215498 ~ 9220528 (-)
G35384 NA other upstream 34142 10923927 ~ 10926163 (-)
slc25a15b slc25a15b,LOC107744499,LOC107687678,LOC107599942,LOC107726376,LOC107672737 other upstream 70526 10960311 ~ 10969118 (-)
hmgn7 hmgn7,LOC107672554,LOC107756557,LOC107680402,LOC107565427,LOC107748629,LOC107597243,LOC108260037,LOC108442050 other upstream 530170 11419955 ~ 11467122 (-)
G35554 LOC100304549,LOC100219516,LOC106514001,LOC103353280 other upstream 693995 11583780 ~ 11652627 (-)
msna msna,msn,moes,LOC107746233,LOC107597256,LOC107672695,LOC107663223,LOC107741191 other upstream 905871 11795656 ~ 11815944 (-)

Expression


Co-expression Network