LOC122344789 (LOC107704867,LOC107594577)


Basic Information

Item Value
gene id LOC122344789
gene name LOC107704867,LOC107594577
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 262368 ~ 272815 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238360.1
GTTAAATGGCGTTTTGTTTAACAACATACAGTACTTTCACAAAGTCATTTCATAACTTAAttgaaatgattcattaaatcGTTGAAGTTCTCTTTgccttttaaatacatattcatacTCAGTGATTCAAAAGATTTGCGTTTGGCTCAATCGTTTATGCCGTTTAGGAGGAAGGAAAAAGTTGTGGTAAAAGTTTCAGTCATCAGTTTTCCCATTCTTTCAACCGCACTCTTTGAAAAGACAGGCTAACAGACAGACTAATAATCTAGTCGCAGTAGTTCCAGCGCGTGCCGTCGTCATTATGgCCAGTTTCACTAATGTACAATCCCTGACGTCTCGTTTTAATTCACTGGCTGGTGAAAGTCCGTTTTCCCAACCTGCCCAGAACAATCATTTCGGCAGCACCGGGAAACATGAGATGAATCCATTGTTGATCCCCAAGCTGCCAAAACTCAAACCTGTGGACATGAACAGAGGCGCGGGCTCCAATCCTTTGCCTAAACCGCTCATGGTCAAACCCAACTTCATAGTTAACTCTATGGAGACCAGATTCAATCCTCCGGTTTCTAGCAACAGGACCGATAGTGATGCCGTTGGAGCGAAGCTTCCCAATCGATGGAAACTGGAGAACGCTTATACGCAAGCTCCCATCGTAGCCGGATCCCAGAGTCCTGCCAAACCGTCTGTTATGCTCAAACCCCTTCTTCATGAAAAGATCTTTAAAGCACTGGAAACCACTGCTGGTGATTTGTCGGTACCGAAAAAGAAGCCTCTTCCCGGTTTGTATGTTTTAGGAAAGTGTCCCGCCAAACCACAGAGACCTCCGCTAGTTAACCTCAACAGGTTCAGAGGGAACGTGTCCAACAGCAGCGTCCCTGAGGAAAGTTTCTCTCTCCCACCTCCACCGCCTCCTGATCGCCTGTCAATCACGTCTGTGACTCCACCCCCTCCACCACCACCAGACTTCCCATTCCCACCTGCCCCCCCTCCGATGGATGAGGAGGATTATTATGACGATACGGACGTCACGAACCGGACCGAGACTTCACTAGGTGAAAGCCACAATGACCCGGAGGGATCAGACGAGGAAATGTACCAGGATCTCGATCACAACTGGCCAGAAAACAACAAGGAACCAAAGGATGAAAAGATGACAAAAGAATCGAAGGAACTAAAGAAAAAGAtggaaaaagaagagaagaaacgctttgagcaggagaagaaagagaagaaggagagagagaaaaaggagcaAGAGGCCAGGAAAAGGTTTAAGATCAAGGGTCCTATCGTGGTTCTTGAAACGGTGAAGGTCAGCGTGGATCACAAGGGAGGAAAGAACAAGCTTCCACTGAAGCAGGGAGAGAGCATTGAAATAGTGCGCAAAACAGAAAACCCAAAGGACTTTTGGCTCGCCAGAAACCCTGAAGGCCACTATGGTTTTGTGAAGCCTGACACTCTAGATGTTGTGAGAAGCACAACGGACGGACAGGATGTGTATGATGACGTGGGCGCTGATGAAGACCTCAATAATGTACCAGATGCTGAATGTGATGACGATATTTATGATTGTCCAGACGAGCAACAAGCTGATTTCAGCtttccacctccacctcctccagaCCTCACTGAATTTAATGATGCTATGGATGAGACATACGATGACATTCTTCAGACAGACTTCCCTCCTCCTCCGTCTCCTAAAAGCAACTTTCCAAGATTCAGCTCAACAAGTAAGACAGATGAGATGGAcccaaagaaaaagaagaagtttGAGAAGGAGGAGAAAGAGTTTAGGAAGAAGTTTAAATATAATGCGGAAATCCGAGTGCTGTATCAAGCTACTGTTCTCCAGTCACTGTCTATAAAGAAGTTTGACAATAAAGACTTGCCAGTCAAGCCTGGAGAAATCATTGATGTTATAGTTCATCCAGTAGGTGGCAAACTCATCGGCCGGAACGGTGAAGGAAAATTCGGCTATGTGTCGAATGCTAATTTGGAGCTGGACAGCTCTATTTACGACGATGTTGGTGATGAGTGCCTCTATGACAATGACTAAACATGGATAGACTCATCCAGTGTGTTTTCATCATCTTTCAGCTTCCTTATCTGTCATTTATTCTTTCAG
>XM_043238361.1
GTGCAACACTTTTGTGGCTTTCTGAATTAGAAAACCGACCTTCACATGCTGCTCAACTAAACACCAgagatattattattagcattataattattgtacGGATTACTATATAGATTGTGTTGCTTCTGGTTCTGAAAGGCCAAAGAATAAAGTGTGATTTTGAGCTGATGTTCAACCTGACCCCAGATCAGGGTCTTAATGCTCGATAGTGAAACCCTGGTTACACCTCTTCCttattaaagtaatgaaaaCATGCGTTTCCTCTGGGTGTACTTGTGATTATCACCACTGGCAGAGTCGCTGTACTCTTGCGTGCTCACTTGTGTGCTGGCTGGgCCAGTTTCACTAATGTACAATCCCTGACGTCTCGTTTTAATTCACTGGCTGGTGAAAGTCCGTTTTCCCAACCTGCCCAGAACAATCATTTCGGCAGCACCGGGAAACATGAGATGAATCCATTGTTGATCCCCAAGCTGCCAAAACTCAAACCTGTGGACATGAACAGAGGCGCGGGCTCCAATCCTTTGCCTAAACCGCTCATGGTCAAACCCAACTTCATAGTTAACTCTATGGAGACCAGATTCAATCCTCCGGTTTCTAGCAACAGGACCGATAGTGATGCCGTTGGAGCGAAGCTTCCCAATCGATGGAAACTGGAGAACGCTTATACGCAAGCTCCCATCGTAGCCGGATCCCAGAGTCCTGCCAAACCGTCTGTTATGCTCAAACCCCTTCTTCATGAAAAGATCTTTAAAGCACTGGAAACCACTGCTGGTGATTTGTCGGTACCGAAAAAGAAGCCTCTTCCCGGTTTGTATGTTTTAGGAAAGTGTCCCGCCAAACCACAGAGACCTCCGCTAGTTAACCTCAACAGGTTCAGAGGGAACGTGTCCAACAGCAGCGTCCCTGAGGAAAGTTTCTCTCTCCCACCTCCACCGCCTCCTGATCGCCTGTCAATCACGTCTGTGACTCCACCCCCTCCACCACCACCAGACTTCCCATTCCCACCTGCCCCCCCTCCGATGGATGAGGAGGATTATTATGACGATACGGACGTCACGAACCGGACCGAGACTTCACTAGGTGAAAGCCACAATGACCCGGAGGGATCAGACGAGGAAATGTACCAGGATCTCGATCACAACTGGCCAGAAAACAACAAGGAACCAAAGGATGAAAAGATGACAAAAGAATCGAAGGAACTAAAGAAAAAGAtggaaaaagaagagaagaaacgctttgagcaggagaagaaagagaagaaggagagagagaaaaaggagcaAGAGGCCAGGAAAAGGTTTAAGATCAAGGGTCCTATCGTGGTTCTTGAAACGGTGAAGGTCAGCGTGGATCACAAGGGAGGAAAGAACAAGCTTCCACTGAAGCAGGGAGAGAGCATTGAAATAGTGCGCAAAACAGAAAACCCAAAGGACTTTTGGCTCGCCAGAAACCCTGAAGGCCACTATGGTTTTGTGAAGCCTGACACTCTAGATGTTGTGAGAAGCACAACGGACGGACAGGATGTGTATGATGACGTGGGCGCTGATGAAGACCTCAATAATGTACCAGATGCTGAATGTGATGACGATATTTATGATTGTCCAGACGAGCAACAAGCTGATTTCAGCtttccacctccacctcctccagaCCTCACTGAATTTAATGATGCTATGGATGAGACATACGATGACATTCTTCAGACAGACTTCCCTCCTCCTCCGTCTCCTAAAAGCAACTTTCCAAGATTCAGCTCAACAAGTAAGACAGATGAGATGGAcccaaagaaaaagaagaagtttGAGAAGGAGGAGAAAGAGTTTAGGAAGAAGTTTAAATATAATGCGGAAATCCGAGTGCTGTATCAAGCTACTGTTCTCCAGTCACTGTCTATAAAGAAGTTTGACAATAAAGACTTGCCAGTCAAGCCTGGAGAAATCATTGATGTTATAGTTCATCCAGTAGGTGGCAAACTCATCGGCCGGAACGGTGAAGGAAAATTCGGCTATGTGTCGAATGCTAATTTGGAGCTGGACAGCTCTATTTACGACGATGTTGGTGATGAGTGCCTCTATGACAATGACTAAACATGGATAGACTCATCCAGTGTGTTTTCATCATCTTTCAGCTTCCTTATCTGTCATTTATTCTTTCAG

Function

NR:

description
PREDICTED: FYN-binding protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238360.1 False 2128 mRNA 0.45 18 262368 272815
XM_043238361.1 True 2159 mRNA 0.46 18 262368 272452

Neighbor

gene id symbol gene type direction distance location
lifra LOC107594555,LOC107704172,LOC107658266,LOC107725078,LOC107750295,LOC107567645 coding downstream 39814 205102 ~ 222554 (-)
LOC122345224 spef2,LOC107704166,LOC107725157,LOC107573760 coding downstream 60759 185338 ~ 201609 (-)
LOC122346175 LOC107667871,LOC107707936,LOC107571030 coding downstream 181305 76028 ~ 81063 (-)
c5h5orf34 LOC107750289,LOC107658216,LOC107567649 coding upstream 353 273168 ~ 278284 (-)
paip1 paip1,LOC107725119,LOC107704219,LOC107658232,LOC107567649 coding upstream 6136 278951 ~ 286298 (-)
mybbp1a mybbp1a,LOC107658206,LOC107704885,LOC107594578,LOC107567654,LOC107750298 coding upstream 14318 287133 ~ 299381 (-)
fgf10b fgf10,LOC107705049,LOC107725110,LOC107594591,LOC107658296,LOC107567653 coding upstream 28823 301638 ~ 313028 (-)
adamts12 LOC107725168,LOC107704241,LOC107594580,LOC107750303,LOC107658289,LOC107567650 coding upstream 44026 316841 ~ 339731 (-)
G32086 NA non-coding downstream 57832 162490 ~ 204536 (-)
G32102 NA non-coding downstream 236476 25514 ~ 25892 (-)
G32100 NA non-coding downstream 244853 16470 ~ 17515 (-)
G32099 NA non-coding downstream 247063 12703 ~ 15305 (-)
G32098 NA non-coding downstream 250499 11445 ~ 11869 (-)
G32150 NA non-coding upstream 78152 350967 ~ 352079 (-)
G32177 NA non-coding upstream 158815 431630 ~ 431890 (-)
G32186 NA non-coding upstream 183302 456117 ~ 482271 (-)
G32187 ugt2b3,ugt2b1,LOC107667397,LOC107725113,LOC107667542,LOC107723313 non-coding upstream 185665 458480 ~ 479881 (-)
G32191 NA non-coding upstream 192249 465064 ~ 470468 (-)
rictora rictora,LOC107704198,LOC107658248,LOC107567655,LOC107750288,LOC107594576,LOC107725140 other downstream 697 239951 ~ 261671 (-)
G32104 LOC107725162,LOC107594575 other downstream 226020 35777 ~ 36348 (-)
G32103 LOC107725162,LOC107704185,LOC107594575 other downstream 227651 33779 ~ 34717 (-)
G32101 LOC107594575,LOC107725162,LOC107704185 other downstream 238419 20139 ~ 23949 (-)
kcnv2b atp5ib,atp5i,atp5ia,kcnv2b,LOC107703581,LOC107725101,LOC107704252,LOC107594594,LOC107723293 other upstream 109237 382052 ~ 387878 (-)
ddr2l ddr2l,LOC107704361,LOC107725118,LOC107550294,LOC107723312,LOC107667359,LOC108444179 other upstream 283839 556654 ~ 583095 (-)
wdr31 wdr31,si:ch73-266o15.4,LOC107653158,LOC107667323,LOC107751417 other upstream 349699 622514 ~ 631126 (-)
castor1 gatsl3,LOC107755828,LOC107726730,LOC107704487 other upstream 1039789 1312604 ~ 1336187 (-)
lrrc74b lrrc74b,LOC107755819,LOC107667596,LOC107599620 other upstream 1069791 1342606 ~ 1354414 (-)

Expression


Co-expression Network