CI01000004_15316323_15317231


Basic Information

Item Value
gene id CI01000004_15316323_15317231
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 15315947 ~ 15317342 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_15316323_15317231.mRNA
GTATGAAAAGGAAAGTACTGTATTGCTGGTATGCAGGTTACTCTAGTTTTCATTTTCAGTTTTATACCTACTATTTTAATATCTAAGTTGTTGAATATGAGTAGGGTTGTTGAATCAGCAATAGTGGCTATGGACAGATGAACTTATAAAGAAAGGTAAAACTACACCAACAATAACGTATTTGGAAAAGTAAACACACTTTACTAATAATGTACTTCCAATGAAAGTGGGCTATTCATCTGATTGTGTAGGGCTGGCCTTCATCTCAGTAGGGTGTGTCTATACTGAGAGCTGCTGTGAACTGTTTCAGTGAGGAACTAAAAAGAAAGACTAAAATTGTGGCTGTTGTGATTTCTGCCTTGAACTATGCCTTACCATGGACACATCAATCCCTTCACTTCTGCTGGTTCTGTGGCTCAAGAGTTTTCTCAACTGGTTGGTGGTCGTGATACAGCGACACTACATGATCCGGACATTCTCAGGATTCTTCTGCATTTCCTTGGCACTGATTGACAGTCTCTTGAGTTTTGCCCTCACAGCTATTTTCTATCTGGAAGGCGTCAACATCTCAGGCTGGCATTTCACCAGGTATCACATATGCCTACTGACTCAGATTGCTTGTTTTATCTATGCCATGCTCCACTGGCCAGTGTTCCTCCTTGTAGGACTAGATAACTTCTGGACGCTATCATCAAGCTCAAGAAACACAACCTGGACACAAAAGCTGACTTACATTGCGGGAGTGTGTCTCCTTTGGATTCTAGCAGCTCTGTACGTCTTCTGGGTGCCTGACGTTTCTCCGCTGTTAGGAGATGATGAGAAGCACCGATGCAAGCTGTTCAGCGGCCCTCAGAGTTCTCAGGTTCTCCTTGCATTGTTACTGATGGCCACCTGCGTCATTATTTACTCGTACGCTCCGTTTGAGAAACGGAGGGTGCAGGTTTTTCTGCATTCCACTCAACCATGCTGTTTGGTTTGTTTAAGGCGGATTATGCATACGTTCCTCAGCACATGGGCCTCGTTTCTCATTCTGATAATCATCTCGCCGCTGCTAAAGATAGAGATGGACGCACACCTGCAGTTAAACGTCGTCTGGTTGAGTTTACTCAACAGTTTTTCTGTCGCTTTGGCACTGTCTGGCCGCACTTTTGCAGCAAATTCCATGAAAAGCGAGACCATTACAGATGGTTTTTGTTCATGGTACTTTTGTTTTACATATGGAGCTGACGAGTGGAATTATGGACAACAAGCTGACCGCATTCAAGTTAAAACACCAAATGTCTGACCATTTATTCTGGAGTATGCCTATTTGCTTTCTTGTTTGCATTACAAAAAGAAAAATTAAACATATGTAGGTTTGTAAATTAGCCTGCAAATGATTTGTGTCTTTAGTAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_15316323_15317231.mRNA True 1396 mRNA 0.42 1 15315947 15317342

Neighbor

gene id symbol gene type direction distance location
CI01000004_15291659_15296777 NA coding upstream 18100 15291659 ~ 15297847 (+)
CI01000004_15277204_15286845 SAMD7 coding upstream 28960 15277204 ~ 15286987 (+)
CI01000004_15260416_15262090 APODA.2 coding upstream 53707 15260239 ~ 15262240 (+)
CI01000004_15237719_15253901 COPA coding upstream 61789 15237719 ~ 15254158 (+)
CI01000004_15229290_15233374 PEX19 coding upstream 81350 15228776 ~ 15234597 (+)
CI01000004_15325044_15326740 NA coding downstream 7702 15325044 ~ 15326787 (+)
CI01000004_15400244_15414139 NA coding downstream 82902 15400244 ~ 15414376 (+)
CI01000004_15444403_15453408 SPPL2, SPPL2B coding downstream 127061 15444403 ~ 15454177 (+)
CI01000004_15631508_15632389 NA coding downstream 314088 15631430 ~ 15632403 (+)
CI01000004_15645965_15650241 NA coding downstream 328623 15645965 ~ 15650274 (+)
G34061 NA non-coding upstream 44042 15271644 ~ 15271905 (+)
G34055 NA non-coding upstream 79564 15236130 ~ 15236383 (+)
G33896 NA non-coding upstream 92033 15223661 ~ 15223914 (+)
G34032 NA non-coding upstream 155887 15106736 ~ 15160060 (+)
G34031 NA non-coding upstream 209248 15106422 ~ 15106699 (+)
G33857 NA non-coding downstream 101919 15419261 ~ 15425806 (+)
G34090 NA non-coding downstream 115826 15433168 ~ 15433373 (+)
G34100 NA non-coding downstream 163921 15481263 ~ 15481530 (+)
G34101 NA non-coding downstream 164578 15481920 ~ 15482315 (+)
G34141 NA non-coding downstream 238513 15555855 ~ 15556213 (+)
CI01000004_15091390_15096502 GA45B, GADD45B, GADD45BB other upstream 223978 15091200 ~ 15097173 (+)
CI01000004_14036114_14036449 KIAA0040 other upstream 1279047 14035393 ~ 14039142 (+)
CI01000004_12646972_12652534 NA other upstream 2660236 12646838 ~ 12652570 (+)
G31865 NA other upstream 3120800 12192130 ~ 12197418 (+)
CI01000004_11666900_11667179 NA other upstream 3648288 11666900 ~ 11667659 (+)
G34220 NA other downstream 622015 15939357 ~ 15939950 (+)
G33815 NA other downstream 746073 16063415 ~ 16066464 (+)
G34400 NA other downstream 1659986 16971995 ~ 17025976 (+)

Expression


Co-expression Network