gltpd2b (LOC107663399,LOC107746407,LOC107734136,LOC107661211,LOC107596106,LOC107580519)


Basic Information

Item Value
gene id gltpd2b
gene name LOC107663399,LOC107746407,LOC107734136,LOC107661211,LOC107596106,LOC107580519
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 14221600 ~ 14225996 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238376.1
TGTTGCGCAACATCACTGGAGTCTGACAGCACAGACAGAGCAGGACAAGAGacgaaaaagaaataaaaacagcctAATGCAAAAATCTGCTTAACATAAGTTTGACCGTGGGACTAACCTTAGGATATACAGGAAGTGGCTCAAAACAAGGAGCTACACACAGACTGTCTGTCTAGTAGCTGAGCACACGAGAGCAAGAATTTGCTTGCCGACTTGTGGTTGAGTGAAGTTTGAAACCCATTCAAAAATTGACAATCACACTGTGTAAGAGACTAAGGGAATGATGCTCAGGAGAAAGACTGGGAACGCATAGACTGAGAAAGAAAGTTAGGCCCCGAGGAGACGCAGCAAAGAGGAGGATTGTGGATCATTATGGGAGTCAAATGCAAGGCTTTTGTTGCCATTGTCTTCATCCTCCTTTTGTTTGGCTCCATGTGGCTCCATGGGAATCTGGCGGACCACTGGAATACCTGTCCAAAGGTTTATCACGGAAAAAACAAGGTTCTGTCTTTCATTATAGTTAATAGTTCAGATGGCGATGTGGCTCCATTGAGGGTATGTCCTGACCAGAGGTTTCAAGTTGCCAATTTGCTGGCTCAGCTGCAGGCAGCTCCAGTGTCAACCAATGATGTGCTGCTAAAGCCTTACCTGGCAAGCTGGGATGAGCTTATCAATTTCTTGGAAGCCTTGGGGCCAATGGTAGGTTTAATTTCACAAGAAATTGAGTCGAAAACTGCCATCATCCGTGAGCTGGCccaagaagagaagaaagaggcagagaagaaattgaaagaaagaaaaacgcACCAGAAAAGCGACCCAGTATTAATGATGTCTCATAACAGCTCTTCAGACTACTCTGAAATGAATCACAGACTCTCATTTGGTTACACTTCTGTCCGGTCTATGATTAAATGGGAGCTGGAGAGCGGTTTGGTAGACTTCAACAAGCAGACAAACTCAGGCTGCAGGACTCTGTTGCGATTGCATCGTGCTCTGCTCTGGCTGCAAAATTTCCTCTTGGAACTGGGCAAGGACACAAGTGAAGGAGAGCATCTGCGAAGCCCTTCTGACCTCTGCAAAGAGACTTACCAGCGTACACTCGCCCACCACCATACCTGGTGGGTAAGGAAAGCAGCAGAGCTGGCTTTTCTTGCTATGCCCGAACGACCTTATTTCTACCAGTTGGTGTGTGTGGAAACGCAGGCAGAAGCTGCTGTGGTGCTAAACAGGGTAGTGAGAGCAATAGAAGAAGTGTACGAGAGAAATGAAGTCGCTCTACAGGAACACAGCATGCTAGACCTACCTTGAGcgtagaaagagagagaaaaatcatGGGATCAACCTAGAGAACAGGGCAGTTAAATTATAGTGaccaactttattttttaatattagggTCCAAATTCATGGAATGGgccatttttattctttatcttTTTAGGGAAACAGAACTACATTTAGAACAACTAAATATATAGTATACCTGCTGGTGCTAATGAATGAATACCGTTCGCATAAAGATAACACGATAAACCAATAACACACATTTGTGTAGCAACTATGGATGAAAATTATAAACTGGTAATCATGCTGTATTCAGTTCTTGTCATGTTTTCATGACATTATGAAAGCCATGTGTTGTTGTGAATTAGCAGTTTTCAGATTTGCACCTTAATAGTCCTAGTCGACTGTGAAAGATAAACTAAAGCATACTCAGCAGATGGACAGAACAGTCTGAAGTCCTGTTTTTATAATCCTTATCAAAAGCAGTTTATAACAGCGCGGTATATTTTCTCACATGCAcacttacttttattttggtatcATGACATGACAAATTAGATAACAATCCAACAACTTTTTTGGTATCTGAAGGtggctatttttttaaagctatacTGACATACCATGtgcaatataaaatgaatgagagaatatgacaacaaaaatattaatgatatttaagaacaacaaaaacagtacCAAACTGTCACTGCAAGTACCTTTTCAAATGGTTCACTTTATGTAATTTAAGTAGTAATACAATTTAGGGGTAAATAAGatacaaaaatgtatcttttagcTTTTGTATATCAGGGTATTTTTTATATCAGATTGTATTGTATTATCATATAGCATCATATGGTTATGTCTCTTTACCTCACATTATCATTCCAGGGAGCCAAAATAGAGCAATGTCTTTAAATCAAATCCATTTATAAGACAATTCTTTGTGAAGTCTTACAGGCTGCTGTTACTAATGTGCGTGAGCATAATTAATACGGGCAAATTACATTGATTAAATTGACAATGATATTCTCATATGGACTAGGACGTGTGTGTAACTCACTGTGTGTGTAACTGTGCATGTCTCTGTGattgtgtgtttgagagagacagTGACAGTTTAAAACTGTATCTTTGTCTTTACCTTCTGCAATTCTACGTTGTACTTCTGAACATTATTATGCGGATTATACAGATAAAGAGGAGACAGTGCATGGTT

Function

NR:

description
PREDICTED: ceramide-1-phosphate transfer protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238376.1 True 2509 mRNA 0.40 4 14221600 14225996

Neighbor

gene id symbol gene type direction distance location
gnb2 gnb2,LOC107663406,LOC108428986,LOC107661206,LOC107746402 coding upstream 65066 14145969 ~ 14156534 (+)
hsd20b2 hsd20b2,LOC107596111,LOC107661247,LOC107734140,LOC107663385 coding upstream 91551 14124109 ~ 14130049 (+)
si:ch211-284e13.5 LOC107746441,LOC107599206,LOC107661202 coding upstream 129118 14088431 ~ 14092482 (+)
LOC122344888 LOC107746395 coding upstream 161820 14057263 ~ 14059780 (+)
apoa1a LOC107663408,LOC107599208,LOC107746394,LOC107661262,LOC107734125,LOC107596115 coding upstream 180541 14038970 ~ 14041059 (+)
mogat3b mogat3,LOC107746411,LOC107663414,LOC107661213,LOC107752358,LOC107596103 coding downstream 50099 14276095 ~ 14280289 (+)
si:ch211-271e10.2 NA coding downstream 57084 14283080 ~ 14287440 (+)
LOC122345145 NA coding downstream 80841 14306837 ~ 14310076 (+)
LOC122345143 NA coding downstream 85648 14311644 ~ 14314601 (+)
LOC122345144 NA coding downstream 89703 14315699 ~ 14320923 (+)
G36420 LOC107663407,LOC107599223,LOC107746393,LOC107661199 non-coding upstream 174106 14046777 ~ 14047494 (+)
G36408 LOC107746439,LOC107663381,LOC107599230 non-coding upstream 214198 14005771 ~ 14007402 (+)
G36406 NA non-coding upstream 218069 14000526 ~ 14003531 (+)
G36405 NA non-coding upstream 221263 13999100 ~ 14000337 (+)
G36332 NA non-coding upstream 246841 13974532 ~ 13974759 (+)
G36503 LOC107599196,LOC107663386 non-coding downstream 95560 14321556 ~ 14326754 (+)
G36507 LOC107663397,LOC107567468,LOC107599188,LOC107746779 non-coding downstream 115927 14341923 ~ 14342507 (+)
G36509 LOC107567468,LOC107752360,LOC107661217 non-coding downstream 117168 14343164 ~ 14343769 (+)
G36510 NA non-coding downstream 119888 14345884 ~ 14346835 (+)
G36573 NA non-coding downstream 239903 14465899 ~ 14466241 (+)
ins ins,LOC107596207 other upstream 235894 13984097 ~ 13985706 (+)
LOC122346073 LOC107654625,LOC107597279,LOC107741224,LOC107696048,LOC107727161 other upstream 1414249 12803789 ~ 12807351 (+)
iscu si:ch211-191d15.2,iscu,LOC107597282,LOC104937683 other upstream 1516355 12703352 ~ 12705245 (+)
si:ch211-225b11.4 si:ch211-225b11.4,LOC107743340,LOC107597327,LOC107654601,LOC107580265,LOC107735986 other upstream 1692810 12514013 ~ 12528790 (+)
G35720 LOC107654642,LOC107597266,LOC107743332,LOC107741203,LOC107557123,LOC107663229 other upstream 1965928 12249138 ~ 12255672 (+)
G36495 NA other downstream 64424 14290420 ~ 14292500 (+)
LOC122345142 NA other downstream 74047 14300043 ~ 14305304 (+)
LOC122345214 NA other downstream 107027 14333023 ~ 14337765 (+)
mrpl1 LOC107663378,LOC107746869,LOC107752362,LOC107599195 other downstream 121566 14347562 ~ 14349991 (+)
fgf5 fgf5,LOC107599194,LOC107746784,LOC107663393,LOC107661278,LOC107602014,LOC107744874 other downstream 419949 14645945 ~ 14652911 (+)

Expression


Co-expression Network