si:ch211-271e10.2


Basic Information

Item Value
gene id si:ch211-271e10.2
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 14283080 ~ 14287440 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238381.1
AATGTTAGCAGACGTAGCCTACAACGTGATGTCttgtcattgtattttttttagacgAAAGTGAAAGTTAAGCTTGCAGCAGTCTCTCAGTGACTCgtgattttttaatttctcgCAGCAGTctcagaacaaaaacaaacaGATAAACAATGAGTAATGTTGCGAAGAACTTGAAGGATTCTCTCAAGAAGTTTGGCTTGAAGGAGGTCTCATCTCCTGAGGGATGCCATTTCTTCCTGTTTTTCTGCCCCATTACTTCCCGCGCCGGAACTGACATTGAAGCTGCAGAGATTTACCTTAATGAAGTCAATAAAGCTCCCAAACCAGTCATCATGGTGGTGCTCCATTACACGTTTGACCCTGAGAAAATTATACTGGACAGCAACAGTGCTATAAAGAGAGAGGACATATTTGCTGTGGACTGTCTGTACAATGACACGGGGTTACTGGCATGTGAGAAGAATACGGAGGCGATTAGTAAAATTCAAGTGgattcaaaattaaatAGGTGGACTTCATATTACTGCTTAAAAAatcATGGAAATCCTTGTCTGCCCATAAACCTGGATGCAAATGATAAGGGATTTAATTGTCCCATATTATAGATCAGTGGTTCTGCTTTGGAATACATTTATTGTTGCCATTGTTCTTCTGACTAATTACGATTATTTGCCTGTTATTcgcaacaaaaaaatgatatttcaattttttggaGTAGTAATATAAGTGTAGTAATATACCACAtgaagataatataatataaataactaacAATTGCTTGATCAGCGATATGTGTATGAAAAAGTGTCTAGTATGAAGCAAATGTAGCCACTACAATTAAGTGTTCtgtgaaaaaagtttttaaacccAAGCACTCAAATATTTGCATGCCAGTCAAACAATGGTTTTtgcaaaactgatttaaatagCTGCTCAACTTGCTCCTGACCATTTTTTCCGTGTTTCCCAACCACCCCAACCTGATTCATTCTTTCCGTATAGGAAAACACAAACCAAACCAGTTCACCGGATTAGCTTTATACTCATACGCACACGCAAAAGGTAATTTTAATCAACACATAacagtgtgtaaaaaaaaaaaaaaaaaacgcacaaaCAATATTTGCAAGAAAAGAGGAACTTAAAACACAGGACAGCTAACAAGATAATGAAACTCTAGGAAGGAAGTTTGCTAGGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238381.1 True 1199 mRNA 0.37 5 14283080 14287440

Neighbor

gene id symbol gene type direction distance location
mogat3b mogat3,LOC107746411,LOC107663414,LOC107661213,LOC107752358,LOC107596103 coding upstream 2791 14276095 ~ 14280289 (+)
gltpd2b LOC107663399,LOC107746407,LOC107734136,LOC107661211,LOC107596106,LOC107580519 coding upstream 57084 14221600 ~ 14225996 (+)
gnb2 gnb2,LOC107663406,LOC108428986,LOC107661206,LOC107746402 coding upstream 126546 14145969 ~ 14156534 (+)
hsd20b2 hsd20b2,LOC107596111,LOC107661247,LOC107734140,LOC107663385 coding upstream 153031 14124109 ~ 14130049 (+)
si:ch211-284e13.5 LOC107746441,LOC107599206,LOC107661202 coding upstream 190598 14088431 ~ 14092482 (+)
LOC122345145 NA coding downstream 19397 14306837 ~ 14310076 (+)
LOC122345143 NA coding downstream 24204 14311644 ~ 14314601 (+)
LOC122345144 NA coding downstream 28259 14315699 ~ 14320923 (+)
cxcl11.8 NA coding downstream 34088 14321528 ~ 14322697 (+)
LOC122344908 LOC107599196,LOC107663386 coding downstream 36903 14324343 ~ 14326767 (+)
G36420 LOC107663407,LOC107599223,LOC107746393,LOC107661199 non-coding upstream 235586 14046777 ~ 14047494 (+)
G36408 LOC107746439,LOC107663381,LOC107599230 non-coding upstream 275678 14005771 ~ 14007402 (+)
G36406 NA non-coding upstream 279549 14000526 ~ 14003531 (+)
G36405 NA non-coding upstream 282743 13999100 ~ 14000337 (+)
G36332 NA non-coding upstream 308321 13974532 ~ 13974759 (+)
G36503 LOC107599196,LOC107663386 non-coding downstream 34116 14321556 ~ 14326754 (+)
G36507 LOC107663397,LOC107567468,LOC107599188,LOC107746779 non-coding downstream 54483 14341923 ~ 14342507 (+)
G36509 LOC107567468,LOC107752360,LOC107661217 non-coding downstream 55724 14343164 ~ 14343769 (+)
G36510 NA non-coding downstream 58444 14345884 ~ 14346835 (+)
G36573 NA non-coding downstream 178459 14465899 ~ 14466241 (+)
ins ins,LOC107596207 other upstream 297374 13984097 ~ 13985706 (+)
LOC122346073 LOC107654625,LOC107597279,LOC107741224,LOC107696048,LOC107727161 other upstream 1475729 12803789 ~ 12807351 (+)
iscu si:ch211-191d15.2,iscu,LOC107597282,LOC104937683 other upstream 1577835 12703352 ~ 12705245 (+)
si:ch211-225b11.4 si:ch211-225b11.4,LOC107743340,LOC107597327,LOC107654601,LOC107580265,LOC107735986 other upstream 1754290 12514013 ~ 12528790 (+)
G35720 LOC107654642,LOC107597266,LOC107743332,LOC107741203,LOC107557123,LOC107663229 other upstream 2027408 12249138 ~ 12255672 (+)
G36495 NA other downstream 2980 14290420 ~ 14292500 (+)
LOC122345142 NA other downstream 12603 14300043 ~ 14305304 (+)
LOC122345214 NA other downstream 45583 14333023 ~ 14337765 (+)
mrpl1 LOC107663378,LOC107746869,LOC107752362,LOC107599195 other downstream 60122 14347562 ~ 14349991 (+)
fgf5 fgf5,LOC107599194,LOC107746784,LOC107663393,LOC107661278,LOC107602014,LOC107744874 other downstream 358505 14645945 ~ 14652911 (+)

Expression


Co-expression Network