zbtb43 (zbtb43,LOC107715540,LOC107668077,LOC107725105,LOC107654302)


Basic Information

Item Value
gene id zbtb43
gene name zbtb43,LOC107715540,LOC107668077,LOC107725105,LOC107654302
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 31859896 ~ 31864890 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238392.1
CGCGACTGTGCGTGATGACGTAAGCTGTACGCAGCGCTCTGGCTCTCGGAAGAGAGGAGGCGAGTTAGCTTTCAGAAAACCGGActaaaatgatgcaaaaaacgAGCGTGTAGATTCCGCGTAACCATGGAGACCGACGCTAACTCCTTCCACGTGGAGTTCCCGGATTTTTCCTGCTCGCTCCTGAAGAAGCTGAACCAGCAGCGGCAGAGAGGGCAGCTGTGCGACCTCATCGTGTCCATCGGGGGCCATCAGTTTCGCGCCCACCGCGCCGTCCTGGCCGCCAGCTCTCCGTACTTCTGCGATCAGGTGCTGCTGAAGAACAGCGCCCGCGTGGTGTTGCCGGACGTCATGCATCCTTGCGTTTTCGAGGCGCTGCTGTTGTCGTGCTACACCGGAGGGCTTTCGGTGCCAAGCGGAGAGGTGGTTTCCTTCTTAACGGCGGCTAGCTTCCTGCAGATGTGGCACGTGGTGGACAAATGCACTGAGCTCCTGGAAGTAGGAAAGAAAAACCGGATCGACCacggatcgtctcctaaaggtGATGGTTACGCCACCGATAATGAAGACGCCGGTCACGCCGCGGGAGAAGATCTAGGCGATTTAGATCCTGCTTTAGGTCCAGGGGCGCTAGAGAGCGGCGGTTGTTCGTCTCCGGATGATCCGAGCAGCGAAAACGGCTCGGATGCAATGGAGAACCAGTGCTCTAAACCGGCCTACGTACCGCCGAGCATCATGGGACACAGAAAGAAGGTGCATATAAAATCGGAAAGGCAGAATCGAGACGCCTGCGGCGGCTTGTTCGGCGCCGAACACGGAGCGAACGACTCGGACGAGAACTCCCACAACCCGAACGCGGCAGAGGACTGTTTCGACGAGAAACTGGCGGAGTGCTTGGATCGGGATTGCTCTTACGAAGAGCCGCTGGACTTCTACGGGACCTCCATGGAGGGCTTTTCGCAAGCCTCGGACGAGCTTTCCAACCCGACCTCCAAGCTCGAAGGCGGCGCCGACGTTTCTAAAGAGGAGACGCCGGGCGACGGCGACGGCGGCGGCTTGAAGGAGCAGACCTCGCACTCGGGCTTCGCTTCGGTGGTCTACAAGCTCTACCCGTGCCAGTGTGGCAAAAGTTTCACGCACAAAAGCCAGAGAGACCGGCACATGAGCATGCATCTGGGTCTGAGGCCGTTCGGTTGCGCCGTTTGCGGCAAGAGCTTCAAAATGAAGCATCACCTGGTGGGCCACATGAAGATCCACACGGGCATTAAGCCTTACGAGTGCAGCCTGTGCTCCAAACGCTTCATGTGGAGAGACAGCTTCAACCGACATACCTCCACGTGTGCGAAGGCCCATCAGAACCGGCGGGCCTCTCAGATCTGCTAGTGCTCCCGCGGGAACGTTCGAGGAACCTCAGCACGGAAGCATCCTTTACCTGAATGCCAAACTAGCCGCTGCACACAGTAGGGTTATTTCAAACAAGCACCTCAATTGGGAACGGAGGCCTTCTGTTCGGTTCGTTCAGGTGTAAAGTATCGGTCAAGAGTTGGGAATAATTACGCCGTTCTCGTGCTCAACAAGGCTGTGTCTATTTATCGAAAAACGGTACAAGCgtgaaaaattattacaatgtaaaatgtgattttaaagctgaaatttcCAGCGTTCGGCGTCACGTGacccttcggaaatcattctgatataccgatctgctgctcaagaaacatttctgattattatccgTGTTGAAAACGTGTGCAACTGTATACGTTTGCAAAGATGAATATGTTACTATTAAGAAAGGTTAAcggtatgaatacttttattcaacaaggatgcattaatcTATTCAAAAGTGATGTTTAGAAtgagatttctattttaaaaattatttgaaattactGTTCATTGAAGagtttggggggaaaaaatgcaatatagtttccacaaaaattctatattatatttacaacattaattaattaacaataccattttaataaatgagcgccataataatttacaagaattgagcagaaaatcagcaaatgtttttgaaggatCGCCTGGAGTAATAATGATTTGCATTataagaatacatttatttctttttttttacattacagtagTTAACAGTATTAAAATTTCAATgctatttcataattttttataatgtatttttaatttaataataataatacagccttggtgagcagaagatacatagtcaacataaaaaaaacccgTATATAATTTCAAACTTTTGACCGATCTTCGATCTACTCACAGAATGATTTAAAGTCAACACGTCACGGACTTTAGATGTTAGCAGATGTTGAAGTAAAATGCCATCTCATGTTGACTTCGGGGTCGTTCTGATGTCTCAGAATGATATCTGAAGGAAAACTATGACCACTTTCTACACAAGAGCCTTGAATGCTGTCATAATATTCAGGTTTAAAGACTCACTAAGCGCTTTGGAGTTTTAACAAGGTTTATCTTctgtaaatagaaatattccCAGATGCAGCATTACGCTGGATTTCGTTTGCTTTAGTTGAGCTGGATTCGGTGTTTGGCGTCAACTCTATTGCCGATCTCTGTAACCGGAGCGTTTCCGATAGGATTTCTCAGAGAACAGCGCTTGTTTCAGCTGCTAATCTGCTCTAATCCATTTTATGCTCTAAAAGTCAACAGATTTATTAGGAGGATtttgaagggggaaaaaagtcaaataaaatcttACATAATGCTGCATTAATGGCATTGACATTTTCATCTCCTTCTGCAGTGTTCTTGTATGTGATGTTcattttgtcaaaatgtttctataatgtgccataattgtaaaatattagaaatgtcATCTCTATATGGGCGAA

Function

symbol description
zbtb43 Predicted to enable RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Orthologous to human ZBTB43 (zinc finger and BTB domain containing 43).

NR:

description
PREDICTED: zinc finger and BTB domain-containing protein 43-like

GO:

id name namespace
GO:0005634 nucleus cellular_component
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG:

id description
K10514 ZBTB43; zinc finger and BTB domain-containing protein 43

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238392.1 True 2879 mRNA 0.46 2 31859896 31864890

Neighbor

gene id symbol gene type direction distance location
LOC122345662 ralgps1,LOC107666038,LOC107557582,LOC107725136,LOC107654291 coding downstream 2294 31759936 ~ 31857602 (-)
zgc:153704 zgc:153704,LOC107591480,LOC107562205,LOC107725160,LOC107665866,LOC107654290 coding downstream 123945 31733458 ~ 31735951 (-)
srrt srrt,LOC107665251,LOC107591506,LOC107725089,LOC107734366 coding downstream 176316 31674315 ~ 31683580 (-)
LOC122345089 NA coding downstream 188288 31668017 ~ 31671608 (-)
si:ch211-283g2.2 NA coding downstream 192281 31661478 ~ 31667615 (-)
lmx1ba lmx1b,lmx1ba,LOC107591520,LOC107668223,LOC107725103,LOC107654328,LOC107557569,LOC105902565 coding upstream 30913 31895803 ~ 31934473 (-)
mvb12ba mvb12ba,mvb12b,LOC107591487,LOC107666228,LOC107654329,LOC107725155,LOC107557586 coding upstream 78965 31943855 ~ 31960848 (-)
pbx3a pbx3a,LOC107668307,LOC107591489,LOC107725095,LOC107654303,LOC107715538,LOC107550583 coding upstream 114997 31979887 ~ 32016468 (-)
ajm1 zmp:0000000794,cunh9orf172,LOC107725135,LOC107666534,LOC107557588,LOC107715543,LOC107654331 coding upstream 184762 32049652 ~ 32067214 (-)
rabl6a rabl6a,LOC108427817,LOC107725084,LOC107667101,LOC105021747 coding upstream 217670 32082560 ~ 32103786 (-)
G41051 NA non-coding downstream 61628 31797709 ~ 31798268 (-)
G41037 NA non-coding downstream 127637 31712351 ~ 31732259 (-)
G41023 NA non-coding downstream 158078 31655583 ~ 31701818 (-)
G41018 LOC107734365 non-coding downstream 164108 31691866 ~ 31695788 (-)
G41019 prdx4,LOC107665442,LOC107591478,LOC107734341,LOC107654298 non-coding downstream 175060 31683968 ~ 31684836 (-)
G41064 NA non-coding upstream 111046 31975936 ~ 31977051 (-)
G41065 NA non-coding upstream 112824 31977714 ~ 31978466 (-)
G41177 NA non-coding upstream 521237 32386127 ~ 32386472 (-)
G41198 NA non-coding upstream 573729 32438619 ~ 32439145 (-)
G41191 NA non-coding upstream 579392 32444282 ~ 32445281 (-)
G41035 LOC107734367,LOC107665727,LOC107725151,LOC107591476,LOC107654325,LOC563292 other downstream 136990 31721270 ~ 31722906 (-)
apooa apoo other downstream 148159 31702453 ~ 31711737 (-)
LOC122344987 LOC107591496,LOC107663763,LOC107725109,LOC107734348,LOC107563429,LOC107654309 other downstream 509447 31331349 ~ 31350449 (-)
G40752 hspa5,LOC107686379,LOC107743071,LOC107687227,LOC107567952,LOC107734417,LOC107734415,LOC107686377 other downstream 1033538 30817732 ~ 30826358 (-)
G40713 lzts3,LOC107567954,LOC107687254,LOC107574519,LOC795227,LOC107665914 other downstream 1067177 30789633 ~ 30792719 (-)
tnca zmp:0000000846,LOC107715542,LOC107557573,LOC107591511,LOC102306937,LOC107725145 other upstream 249006 32113896 ~ 32174064 (-)
LOC122346090 LOC107704013,LOC107725152,LOC107748063,LOC107654332,LOC107557589,LOC107594564 other upstream 349141 32214031 ~ 32293782 (-)
LOC122346085 LOC107748069,LOC107679343,LOC107594586 other upstream 418647 32283537 ~ 32314631 (-)
LOC122345737 egflam,LOC107704151,LOC107667876,LOC107725173,LOC107725080,LOC107564362 other upstream 873527 32738417 ~ 32757869 (-)

Expression


Co-expression Network