eef2l2 (eef2l2,LOC107681082,LOC107746808,LOC107552597,LOC107676651,LOC108414462,LOC107708638,LOC108255789)


Basic Information

Item Value
gene id eef2l2
gene name eef2l2,LOC107681082,LOC107746808,LOC107552597,LOC107676651,LOC108414462,LOC107708638,LOC108255789
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 15451024 ~ 15457371 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238413.1
TCCACATGACTCCGCAGTGCTTTCTGTCGCAGCATAAACTAAGATTGTACGtcacagtctctctctttcgcCCAAGTCCTCAGCGGAGAGGAGCAGCGACCGCAGCGCGAGGCCGTCCTAGACTTGGGAGCCAGTCGCCAAAATGGTGAACTTCACGGTAGACCAGATTCGGGAGATCATGGACAAAAAGTCCAATATCAGGAACATGTCTGTGATCGCCCATGTGGACCATGGGAAATCTACTCTCACTGATTCCTTGGTGTGCAAAGCCGGTATTATTGCTTCTGCACGTGCAGGAGAGACCCGATTTACTGACACCAGAAAAGACGAACAGGAGAGATGTATCACCATTAAGTCAACGGCCATCTCTCTATATTATGAGCTCAGTGAGAATGACTCGGCCTTCATTAAACAGTGTAAGGATGGTTCTGGCTTCCTGATCAACCTGATCGACTCACCTGGACATGTTGACTTCTCTTCTGAGGTGACAGCAGCTCTGAGAGTTACAGATGGTGCCCTTGTAGTGGTAGACTGTGTTTCAGGTGTATGTGTGCAGACTGAGACTGTGTTGAGACAAGCCATTGCAGAGCGCATCAAGCCTGTCTTGATGATGAACAAGATGGACCGTGCCCTCCTTGAGTTGCAGCTGGAAACCGATGAGCTTTTCCAAACCTTCCAAAGGATTGTGGAAAATGTTAATGTCATCATCTCAACTTACGGAGAAGGAGAGCATGGACCAATGGGAAACATTATGGTGGATCCTGTGGTTGGGACTGTGGGATTTGGATCAGGCCTCCATGGCTGGGCTTTTACTCTGAAGCAGTTTGCTGAGATGTATGTGGCCAAGTTTGCTGCTAAGGGAGATAAGAAAAAAGCAGACCTTCCTCCAGCAGAACGGGCTAAGAAAGTGGAGGAGATGATGAAAAAGCTTTGGGGAGATAAGTACTTTGATCCCTCCTGTGGAAAATTCAGCAAATCAGCAACCAATGCAGATGGAAAGAAGCTTCCTCGTACCTTCTGCCAGCTTGTCTTGGATCCCATCTTTAAGGTTTTTGATGCCATTATGAATTTCAAAAAAGAAGAGACCCAGAAACTGATTGATAAGCTCGAAGTAAAGCTTGATGCAGAAGACAAAGAAAAGGAAGGAAAACCTCTACTTAAGGCTGTGATGCGCCGCTGGTTGCCAGCAGGTGATGCTTTGCTCCAGATGATCACCATCCATCTTCCTTCTCCTGTCACTGCCCAAAGGTACCGCTGTGAATTGCTTTACGAGGGTCCTGGAGATGATGAGGCAGCCATGGGTATAAAGAACTGTGATCCTAAAGCTCCTCTCATGATGTACATCTCTAAGATGGTGCCAACCACCGACAAGGGTAGATTCTATGCTTTTGGTCGTGTTTTCTCTGGTGTCGTTTCTACAGGGCAGAAGGTGCGCATCATGGGCCCAAACTTCACACCAGGAAAAAAGGAAGACTTGTACTTAAAGCCAATCCAAAGAACTATCTTGATGATGGGTCGCTATGTAGAACCCATTGAAGATGTGCCATGTGGGAACATTGTTGGTTTGGTCGGGGTCGATCAGTTCCTGGTGAAGACTGGCACCATTACCACTTTTGAAAATGCTCACAACATGCGTGTTATGAAGTTCAGCGTTAGTCCTGTGGTGAGAGTTGCTGTGGAGGCAAAGAACCCAGCTGATCTACCAAAGCTGGTGGAGGGACTTAAACGTCTGGCCAAGTCGGATCCTATGGTTCAGTGTATCATTGAAGAGTCTGGTGAGCACATTGTGGCAGGTGCTGGTGAGCTTCATCTGGAGATTTGCCTAAAAGACCTAGAGGAAGATCATGCATGCATCCCATTGAAGAAATCAGACCCAGTTGTGTCATATCGTGAAACCGTCAGTGATGAATCAGACCAGGTTTGCTTGTCTAAGTCTCCCAACAAGCACAATCGTCTGTACATGAAATCTCGGCCTTTCCCAGATGGCCTGGCCGAGGACATCGATAAAGGTGATGTAACCGCCCGGCAGGAGCTTAAACAGAGAGCTCGCTACCTGGCTGAGAAATATGAGTGGGAAGTCGCAGAGGCCCGTAAGATTTGGTGCTTTGGACCAGATGGTACAGGGCCCAACATCCTTGTGGATATCACAAAGGGAGTTCAGTACCTGAATGAGATAAAGGACAGCGTAGTGGCTGGTTTTCAGTGGGCAACCAAAGAAGGTGCGCTCTGTGAAGAGAACATGCGGTCGGTCCGATTTGACATTCATGATGTGACTCTTCATGCTGATGCCATTCATAGAGGTGGCGGTCAGATCATTCCCACAGCCCGCAGAGTTCTATACGCTTCTGTGCTTACTGCACAGCCAAGACTCATGGAGCCCATTTACCTGGTCGAGATTCAGTGCCCGGAGCAGGTGGTTGGTGGCATCTATGGTGTGCTGAACAGAAAAAGAGGCCATGTGTTTGAGGAGTCCCAAGTGGCTGGGACACCTATATTTGTTGTGAAGGCATACCTACctgtaaatgaatcatttgGTTTCACAGCAGACCTGAGATCTAACACTGGCGGACAGGCCTTCCctcagtgtgtgtttgaccACTGGCAGATCTTGCCAGGTGATCCATATGATGTAAACAGCAAACCTAGCCAAATTGTGGCCGATACCCGTAAACGCAAAGGTCTGAAGGAGGGTATCCCAGCACTGGACAACTTCCTGGACAAACTATAAATTGCTCTGGATTGTACATTGAAGCTTATAATCTTACAACGTTAACATGATGACTCTAAAATGTATGGCATAACATTTACACAGAAAATCAACCAAGcttaatttaaacattcaaaGCTGCACAATTTGGCAGCAAATAAAACCTGAGCACATTAAACCTGTGTGGATGTGCAAACACAAAGTAAAAGCCAATACAGCACAGTAATCTGGACTTAATAattcaactttaaaaatatatttttccagaTGGATATGAAATATTGCTCTAATCACTGTGTAATGTGTATTGGTTTACATGTCTTAGAATGTATATGTATCATCATGAACTGTGCCCACCTTTTGGCAAAGTATTCAAGATTCTCAACAACATTACATGTGCCATTATCAATGGAGAGCTATGTCAATTCAAAACCTCAACCCTGACTGGGAGGGACAATAAAAGCACTGTATCAACATTTACAGCa

Function

symbol description
eef2l2 Predicted to enable GTPase activity; ribosome binding activity; and translation elongation factor activity. Predicted to be involved in translational elongation. Predicted to act upstream of or within translation. Predicted to be part of ribonucleoprotein complex. Predicted to be active in cytosol. Is expressed in brain and musculature system. Human ortholog(s) of this gene implicated in glaucoma and spinocerebellar ataxia type 26. Orthologous to human EEF2 (eukaryotic translation elongation factor 2).

NR:

description
PREDICTED: elongation factor 2

GO: NA

KEGG:

id description
K03234 EEF2; elongation factor 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238413.1 True 3192 mRNA 0.46 15 15451024 15457371

Neighbor

gene id symbol gene type direction distance location
mtmr12 mtmr12,LOC107746804,LOC107552602,LOC107708634,LOC107602020 coding downstream 158142 15280214 ~ 15292882 (-)
golph3a golph3,LOC107681169,LOC107552603,LOC107746803,LOC107602021 coding downstream 171752 15268676 ~ 15279272 (-)
parp8 parp8,LOC107746800,LOC107661236,LOC107708633 coding downstream 251187 15174388 ~ 15199837 (-)
isl1a isl1,LOC107661270,LOC107708623,LOC107599171,LOC107602011 coding downstream 322852 15121996 ~ 15128172 (-)
fsta fst,fsta,LOC107746798,LOC107599173,LOC107708632,LOC107602023,LOC107661233 coding downstream 427568 15016899 ~ 15023456 (-)
akr1a1a akr1a1a,LOC107602015,LOC107708643,LOC107676648,LOC105901177,LOC108414433 coding upstream 14721 15472092 ~ 15477073 (-)
dnajb5 dnajb5,LOC107746810,LOC107681063,LOC107708641 coding upstream 22809 15480180 ~ 15493670 (-)
epg5 epg5,LOC107746812,LOC107681055,LOC107676662,LOC107708644 coding upstream 48595 15505966 ~ 15529346 (-)
riok2 riok2,LOC107746813,LOC107681048,LOC107676637 coding upstream 72703 15530074 ~ 15534492 (-)
atxn2 LOC107746814,LOC107680995,LOC107552590,LOC107708645,LOC107676658 coding upstream 77323 15534694 ~ 15554686 (-)
G36811 NA non-coding downstream 281666 15169047 ~ 15169358 (-)
G36714 NA non-coding downstream 545403 14905385 ~ 14905621 (-)
G36708 NA non-coding downstream 569959 14880865 ~ 14881065 (-)
G36696 NA non-coding downstream 752071 14698736 ~ 14698953 (-)
G36631 NA non-coding downstream 798631 14652095 ~ 14652393 (-)
G36967 NA non-coding upstream 104351 15561722 ~ 15562078 (-)
G36968 NA non-coding upstream 104777 15562148 ~ 15562363 (-)
G36969 NA non-coding upstream 106727 15564098 ~ 15565262 (-)
G36986 NA non-coding upstream 256304 15713675 ~ 15713975 (-)
G37067 NA non-coding upstream 271832 15729203 ~ 15729893 (-)
npr3 LOC107681138,LOC107746807,LOC107552598,LOC107602007,LOC107708637,LOC107661273 other downstream 83611 15350016 ~ 15367413 (-)
zfr zfr,LOC107746805,LOC107681158,LOC107552600,LOC107602019 other downstream 142584 15293856 ~ 15308440 (-)
pdzd2 pdzd2,LOC107746802,LOC107681406,LOC107661237 other downstream 186079 15205951 ~ 15264945 (-)
LOC122345141 LOC107752369,LOC107661250,LOC107567461 other downstream 1148643 14292063 ~ 14302381 (-)
znhit1 znhit1,LOC107752359,LOC107661214,LOC106567874 other downstream 1168404 14279674 ~ 14282620 (-)
alkbh2 alkbh2,LOC107746816,LOC107552593,LOC107676640 other upstream 110648 15568019 ~ 15578967 (-)
cenpv cenpv,LOC107718355,LOC107676655,LOC107746825,LOC107680877,LOC107553589,LOC107552586 other upstream 246162 15703533 ~ 15709430 (-)
emc6 emc6,LOC107680863,LOC107746824,LOC107552584,LOC107553592,LOC107552561 other upstream 267656 15725027 ~ 15728108 (-)
fam222ba LOC107552581,LOC107746861,LOC107680853,LOC107676666,LOC107553569,LOC107680837,LOC107552580,LOC107746822,LOC107746829,LOC107680824,LOC107552579,LOC107676664,LOC107553594,LOC107718349 other upstream 285369 15742740 ~ 15808380 (-)
cxcl11.4 LOC107718357,LOC107746875,LOC107553578,LOC107676639,LOC107680777,LOC107552559,LOC107553571 other upstream 382955 15840326 ~ 15841678 (-)

Expression


Co-expression Network