gpsm1b (LOC107741501,LOC107704761,LOC107562333,LOC107597941,LOC107674924,LOC107744057)


Basic Information

Item Value
gene id gpsm1b
gene name LOC107741501,LOC107704761,LOC107562333,LOC107597941,LOC107674924,LOC107744057
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 29673233 ~ 29698626 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238496.1
acacacacacacacacacaggactgAAGTGCGTCTGCTCAGAGCCCCAGAGGAAGAGGGAAGCAGTGAGCAGCTGGAGTTTCTCTACGGCTCCTACAGCTCACCAATGGCTCAGTCGGCGGGCAGCATGGACTCGGATCTGGCCAGCAAGCGGCTCCACTCGAGGATGGAGGCATCTTGTCTGGAGTTAGCGCTGGAGGGGGAAAGACTGTGTAAAGCAGGAGATTTTAAAGGTGGTACAGCGTTCTTTGAAGCAGCTGTTCAGGTAGGAACAGAAGATCTCAAGACCCTCAGTGCCATTTACAGCCAGCTGGGCAACGCTTACTTCTACCTGAAGGAGTATGGCAAAGCCCTGGAGTACCATCGCCATGACCTCACGCTCGCTCGGACGATCGGGGACCGGATTGGGGAAGGCAAAGCCAGCGGAAATCTGGGAAACACTCTGAAGGTTTTGGGCCGCTATGATGAAGCTGCTGTGTGCTGTCAGAGACACCTGGACATTTCTCAAGAACAAGGAGATAAGGTCGGCGAGGCCAGGGCTCTGTATAACATGGGGAACGTGTTTCATGCCAAAGGAAAGCAGCAGCTCTGGGGAGTCTCACAGGATCCTGGAGAGCTTCCTCCTGATGTCAGAGACACGCTGCAGCGAGCCACAGCCTTCTACGAGATGAATCTGTCTCTGGTTAAGGAGTTGGGAGACCGAGCAGCACAGGGAAGAGCCTTCGGTAACCTTGGTAACACTCATTACCTTCTGGGTAATTTTGTCGAGGCCATCAAGTTCCACAGAGAGCGTCTCTCCATTGCAAAGGAATTTGGCGACAAGGCCGCTGAGCGCAGAGCATACAGTAACCTAGGCAACGCTCTCATTTTCCTGAGCCAGTTCAATGCAGCCACAGAGTATTACAGGAAAACCCTGCAGCTCTCTAGGCAGCTGAAGGACCAGGTGATGGAAGCTCAGGCGTGTTACAGTCTGGGGAACACATACACATTGCTGCAGGAGTATGAACGTGCCATAGAATATCACCTCAAACACCTCCTCATAGCTCAGGAGCTCAACGACAGGGTCGGGGAGGGCCGGGCCTGCTGGAGTCTGGGTAATGCTTACGTGTCGTTGGGAAAGCACCGTCAGGCTCTTCATCATGCCCGGAAACACCTGGAAATCTCCAGAGAGATCGGAGACAGGAATGGAGAGCTGACGGCCAGGATGAACGTGGAGGAGCTGATGGAGGCTCTAGGGGTGAAGGAAGCGGATCTCTCTCCGTCTGAATCGGAGTTTAAAGTGCAGGGAGCCAGACCTAAGTTCATCAAGAAAACCAGCATGGAGAGTGTGGACCTGTGGAAATACAGCTCTGAAAAGAATGGAGATGCACCAGATGTTGATGGCATATCAAGAAGGTCGAGGAACCAGCTGTCTCTGTCTAGCAGAAGCAAAAGTTACACAGAAAGTCAGTCATCAGATGAGAGACATTGGCTCGACTCACCTGTGGACACGGATGATATCACTGTTCATGTCACACCTCCAaAACTGGCTCGTGACGCATCGGATGAGGACTGCTTCTTTGACCTGTTGAGTAAGTTTCAGAGCAGTCGTATGGATGACCAGCGCTGTCAGCTGGACGAGCCGCCCAATGGAGAGAATGCCGGAGGAGCGGATCCAAACACAATCAATGACATGATCGATGCCAGTCTGCTGACGTCTCCACAAACGGAAGAGCTCTTTGATTTGATCGCCAGCACTCAAAGCCGCCGCCTGGACGATCAGAGAGTGAGCGTCAGTAACCTGCCCGGACTCAGAATCACCCACAATAACCTGGGCCACCTGTGTGGAGAGAGTGACCTGCAGGAGCCCAGCGACGACTTCTTCAACATGCTCATCAAATGCCAGTCGTCCAGGATAGATGACCAGCGCTGCTCTCCTCCTGAAGGGGGTCCGCGGGCGCCAACCGTCCCAGACGAGGATTTCTTTAGCCTAATCCAGAGAGTTCAGGCCAAGCGAATGGATGAACAGCGTGTGCAGCTGCCGTCTGACGAACAGGAGCCGGATGAAGACGACGGTGAGCCAGGGGCTGCAGACTCCTGAAAAACCTGGGGCCAAATAACACATGCAACGAGGACTGAATGAGAACGGACGCTTGATGGGGAGTGTTTTAGACTGACTATTTCATGAGATGAAGAAACGTGCACAAAGAGACGCATGTGagacataaaaacacaagtGCCATCTCAGTATACGGTGCAGATTTACGCCTTCTGTGCTTTACAGCCAATGATCCATGACGTTTGATAGAGTTCATACTGACTGGAGGAACAGATACCTTGGAAACTACTCTTTGGGCGAATTCACATTTGCAAACACTGCCTGCACTGTTTCAGCACCTAATTAACaacaataattcatttaataaatcgGGCGTAAACGCTGCAAACTAATTTTATAGTTTGGTCTTCTGTTTTTaccaaaatatctaaacaacGGGAGAGCTGATGTACTTTACAGAGACCGTAGAGCATCCAGATGCctaaaaaaagtctgaaatggATCTGAAAGTACAGCCAAACTCCTCCTCAGATtgattttttcatgcatttagcAGGCACTTTTTAACCAGAGTAACTTATAgtaacaaatgaacaaaattaagAGATCGTTCACCCAGAAAGGAAAGtttgctgttaatttactcATTCTCAGGCCATCCCAAGACATGGAGGACTTTTAGCTGAAACCATGGTGATTctcaacattttattctttgtgaattaaaaaaaggcacTACTTAACAATATTTTGAGGTCTTATGAAGCAAAACGGTCGGTCTGTGCAAAAAACTGAACATTAGTTACAGCATTATCAGCTGTAATTCAGAGCCTTAGGCCTGATGTCAAAGCATTCTTCTGaacctgttttttgtttttaaactagtTCACAGCCTGAGCAGCACAGATCTACTCAATCAAAATTCACTTTTGCGTTAATCTTACTATGCATGAACTCATTCAGCGCTCCAGTTCCTCCAACCCTCACTAAACGGAGGAAACTGTTTGTCTTGGACATACATACTGGTGAATTGGCAGAAAAGAATCATGGGGCGTTTGTTCAAAAAGTTAATCTGGGTCAGAACGATGTGAATTTGGATATTCCATGTTTTTTTCCAGGATCAGGAAGCCaatctttattttgtgtcagtttttaaaagcaaagttGAATTGGATCACATTGGAGAAGATACTTTTCCAGATTTCCAAATCTGAAAATTTTACCATTActaaggatttttttaaaacagattacTAGTGATCtaatactaaaaattaaatatttccatCCTTTGTCCCCCAGTTTTTCTGCTTGCCTGAGGCTCGGGATTACGTGCAATAATTTTACGAATAAAGTTCAGTTTGGATTGTTTTACTTCAGAGGCCTCGATGTAATAGTCAAGAGTCACAGGTAGTAATTTTGTGTTGTCCGATATGCTGTTTTTGCCTCAAAGTGACACTAGCCATTCACTTGAATTTATGAATCGTTATGGTTtcagcaaaaaaagtaaatacataaaataaaataaaaatttactttacTGCACTGGTCAAACAAAGCCACCTACATCCTGGATGACCTAAAATGCATTGTGGCGTTTGggggaactatccctttaagctcCACTGATGGTCTGCTTTGTCCAGGCAGTAATAAAGCAGTAGTTAGCTAATAGTATCAAGCAAATGCTGCTGACCTTTGTATCTGGCTATAATAAGCCTCATATCAGCACCAGGTTAAGGTGGATGGAGGGTAGATAATGCGATGCGGTGCTGGTGTTAAGTGAATTCGCCCTGCTGTTTCCCTCGCCAGACTTTCAGATCAAGCTTCTCATTGTCACGTGCTTCTCGTCTATTGCCTTAATTAGACCTGCAGACTCTGATTGTATTCTTTGATATCGTGTTTTCTGAGCTCGTCAGCAGTATTTGGTCCGTGTCCATTGACAGTATTCCCAGTGTCGCACAGCCGCCGCTGTATCTTTCACTTACTTAAATCGCAAGTGCATTTTGGTTCGGCTTTAACCGTTTAGCTGCTGACAGCGCtgtaaaaaactatttctaaacATTAGGGCTGCTTTACGTTCCTATTTGTTTCTTTCGAATTGAAGATGCTGTTGTAACTCCGCAGATGTATTTATTGAAAGTGTTGAGaaatctgtaaaaacaaacaaaaatagacTGTGAAAAGACTTTTTTAAGTGTTGTTAATTTTGGGAGAGTATGTGAATGTGCATAAAAGCTAAATGGAGTTAGCACTTTCATGCTTCACAGTGCTTTGACTGAGTTGACCGAAAGCTTTTAGTTTCTAATTCAAAAAAAGTGATTAGTGAGTTTTCCATAATTGGCTCAGAATCACTGAATCGTGCAAACATCGACCGAGTTACTTTAGTTGGTCGATATTTTAGCCATTTGCGGCTGACTGAACAGCAGAGTAATGCCTCATTGGTGGCAGTTTCATGTAGAAGcattttgaagtcattttaaaatgtgaaccGGCAGTATTTTGGAAGtagaacaatttaaaaaagttttttttttttttgagcaattattattattatagggaATGAAAACAAGTCAATTCACTGCCATATTGTGGTAAAAGAAACTAAGCAAATGCCTCAAAAATGttagatttgttttgttaactCAAGTGTTATGCATTATGTATAATTCCTAAATATTGAAGAAGAaggtacttttatttttcactagttAAAAAACTATTCATATCGATGGATATGTTTTTGACTGATGCATGTATCTAACCCTCATTtctaatattactttattttactacGGTGACCAAACCTTTAGCTCACTGACTGCAGATCAATAATATATAGGAAGTATGTACTAGATTCATAATGGTACGATGTAATGTTGATGAGGTTTAATACGGAgctgtattattaaattattaaacggTATATATTATTTGTCATGGTTTAACTGAAATGATTTATAGTCCATTTGAGTTAACTGTTTTCTCCCTGTGCTATGATTTGCCTTCCATGTACTGTAACAAAATGGTGTGAATAATATGGAGTCtaaaagcctttaaaaagcCACTGCCCCAATGtacataattgttttatatttattttctgttcatGAACATGGGAAAGAATCccttacttttaataaaatgttgataAACTTGA

Function

NR:

description
PREDICTED: G-protein-signaling modulator 1 isoform X1

GO: NA

KEGG:

id description
K15839 GPSM1, AGS3; G-protein signaling modulator 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238496.1 True 5200 mRNA 0.43 14 29673233 29698626

Neighbor

gene id symbol gene type direction distance location
ak1 ak1,kad,LOC107704768,LOC107715674,LOC107674927 coding downstream 3048 29661018 ~ 29670185 (-)
LOC122345545 LOC107728794,LOC107590009,LOC107696375,LOC107696371,LOC107578696,LOC108263699 coding downstream 337545 29325983 ~ 29335688 (-)
LOC122345544 ubr2,LOC107669566,LOC107696377 coding downstream 349548 29303143 ~ 29323685 (-)
brinp1 brinp1 coding downstream 402533 29174951 ~ 29270700 (-)
LOC122344834 LOC108430399,LOC107568487,LOC105913012,LOC103355419 coding downstream 728469 28943741 ~ 28944764 (-)
fam78ab fam78ab,fam78a,LOC107704739,LOC107562331,LOC107674928,LOC107745627,LOC107741498,LOC107597938 coding upstream 140013 29838639 ~ 29846990 (-)
prrc2b prrc2b,LOC107704672 coding upstream 160926 29859552 ~ 29880103 (-)
LOC122344958 LOC107690080,LOC107566862,LOC107728455 coding upstream 212286 29910912 ~ 29919495 (-)
sapcd2 LOC107742165,LOC107660368,LOC107565658 coding upstream 230197 29928823 ~ 29943177 (-)
LOC122344964 LOC107721044,LOC107563395,LOC107558067 coding upstream 268781 29967407 ~ 29970909 (-)
G40264 NA non-coding downstream 26220 29646617 ~ 29647013 (-)
G40083 NA non-coding downstream 1342757 28326897 ~ 28330476 (-)
G40081 NA non-coding downstream 1380296 28292726 ~ 28292937 (-)
G40079 pappaa,LOC107739977,LOC107558864,LOC107675511,LOC107556005,LOC107728218 non-coding downstream 1418026 28254921 ~ 28255207 (-)
G40076 pappaa,pappa,LOC107739977,LOC107675511,LOC107558864,LOC107728218,LOC107556005,LOC106563270 non-coding downstream 1426568 28246418 ~ 28246665 (-)
G40268 LOC107741500,LOC107562332,LOC107704753 non-coding upstream 102568 29801194 ~ 29805802 (-)
LOC122344857 NA non-coding upstream 340828 30039454 ~ 30046148 (-)
LOC122345788 NA non-coding upstream 354986 30053612 ~ 30054797 (-)
G40422 NA non-coding upstream 407216 30105842 ~ 30106738 (-)
G40418 NA non-coding upstream 417782 30116408 ~ 30117863 (-)
eng LOC107562335,LOC107704777,LOC107741503 other downstream 18172 29614719 ~ 29655061 (-)
G40182 brinp1,LOC107715673,LOC107674904 other downstream 183029 29460585 ~ 29490204 (-)
LOC122345120 LOC107728794,LOC107696375,LOC107590009,LOC107739482 other downstream 347118 29323982 ~ 29326115 (-)
G40080 pappaa,pappa,LOC107556005,LOC107558864,LOC107739977,LOC107675511,LOC107728218 other downstream 1408529 28255828 ~ 28264704 (-)
LOC122344874 NA other downstream 1777779 27886041 ~ 27895454 (-)
LOC122344966 LOC107749532,LOC107566852,LOC107742171,LOC107565644,LOC107690083 other upstream 226076 29924702 ~ 29928675 (-)
rnf170 rnf170,LOC107721034,LOC107687247 other upstream 389340 30087966 ~ 30093576 (-)
fubp3 fubp3,LOC107689604,LOC107687236,LOC106566971 other upstream 892217 30590843 ~ 30613141 (-)
G40711 NA other upstream 932402 30631028 ~ 30733360 (-)
G40713 lzts3,LOC107567954,LOC107687254,LOC107574519,LOC795227,LOC107665914 other upstream 1091007 30789633 ~ 30792719 (-)

Expression


Co-expression Network