ak1 (ak1,kad,LOC107704768,LOC107715674,LOC107674927)


Basic Information

Item Value
gene id ak1
gene name ak1,kad,LOC107704768,LOC107715674,LOC107674927
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 29661018 ~ 29670185 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238497.1
CCCAGCATGCTGTGCGGTGCTATATAAAGCGGTGGTGGGCAGAGGGAGGGCTGCCGTGCAGCGGGTCACTCAGACAGACAGGAGCCGGAGACGCTCAGCCTTCACTGGACcgcagagagacagacagGACCATTACATCTCTCACATAACAGACAACCATGGCAGACAAAATTAAAGATGCTAAGATCGTCTTTGTGGTGGGCGGCCCCGGCTCAGGAAAAGGCACCCAGTGTGAGAAGATAGTGGCAAAGTATGGCTACACTCACCTGTCCTCAGGTGACCTGCTGCGTGCGGAGGTGGCATCCGGCTCAGAGAGGGGCAAACAGCTGCAGGCCATCATGCAGAAGGGAGAACTCGTGCCTCTGGACACAGTTCTGGACATGATCAAAGACGCCATGATCGCCAAGGCCGACGTCTCGAAGGGCTACCTGATCGACGGGTATCCTCGTGAGGTCAAACAGGGAGAGGAGTTCGAGAAGAAGATCGGCGCTCCAGCTCTGCTGCTGTACATCGACGCCAAAGCCGAGACCATGGTGAAGAGGCTGATGAAGCGCGGAGAGACCAGCGGCCGTGCAGACGACAACGAGGAGACCATTAAGAAGCGCCTGGACCTCTACTACAAAGCCACAGAGCCCGTCATCGCTTTCTACGAGAGTCGCGGCATTGTTAGAAAGaTTAACTCCGAGCTGCCGGTGGATGAGGTATTTGCTATTGTTGTAAAAGCTATTGATGAGCTGAAGTAAACAGCACTTGACTACAAA
>XM_043238498.1
GCCTGACTGCAGAACTCCAGAACAGACCATTACATCTCTCACATAACAGACAACCATGGCAGACAAAATTAAAGATGCTAAGATCGTCTTTGTGGTGGGCGGCCCCGGCTCAGGAAAAGGCACCCAGTGTGAGAAGATAGTGGCAAAGTATGGCTACACTCACCTGTCCTCAGGTGACCTGCTGCGTGCGGAGGTGGCATCCGGCTCAGAGAGGGGCAAACAGCTGCAGGCCATCATGCAGAAGGGAGAACTCGTGCCTCTGGACACAGTTCTGGACATGATCAAAGACGCCATGATCGCCAAGGCCGACGTCTCGAAGGGCTACCTGATCGACGGGTATCCTCGTGAGGTCAAACAGGGAGAGGAGTTCGAGAAGAAGATCGGCGCTCCAGCTCTGCTGCTGTACATCGACGCCAAAGCCGAGACCATGGTGAAGAGGCTGATGAAGCGCGGAGAGACCAGCGGCCGTGCAGACGACAACGAGGAGACCATTAAGAAGCGCCTGGACCTCTACTACAAAGCCACAGAGCCCGTCATCGCTTTCTACGAGAGTCGCGGCATTGTTAGAAAGaTTAACTCCGAGCTGCCGGTGGATGAGGTATTTGCTATTGTTGTAAAAGCTATTGATGAGCTGAAGTAAACAGCACTTGACTACAAA

Function

symbol description
ak1 Predicted to enable adenylate kinase activity. Predicted to be involved in nucleoside diphosphate phosphorylation and nucleoside triphosphate biosynthetic process. Predicted to act upstream of or within ATP metabolic process; nucleobase-containing compound metabolic process; and phosphorylation. Predicted to be active in cytosol. Is expressed in cephalic musculature; hypaxial myotome region; myotome; pectoral fin musculature; and somite. Human ortholog(s) of this gene implicated in congenital nonspherocytic hemolytic anemia and hemolytic anemia. Orthologous to human AK1 (adenylate kinase 1).

NR:

description
PREDICTED: adenylate kinase isoenzyme 1

GO:

id name namespace
GO:0046034 ATP metabolic process biological_process
GO:0006165 nucleoside diphosphate phosphorylation biological_process
GO:0009142 nucleoside triphosphate biosynthetic process biological_process
GO:0005737 cytoplasm cellular_component
GO:0005524 ATP binding molecular_function
GO:0004550 nucleoside diphosphate kinase activity molecular_function
GO:0004017 adenylate kinase activity molecular_function

KEGG:

id description
K00939 adk, AK; adenylate kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238497.1 True 761 mRNA 0.55 7 29661018 29670185
XM_043238498.1 False 658 mRNA 0.53 7 29661018 29666833

Neighbor

gene id symbol gene type direction distance location
LOC122345545 LOC107728794,LOC107590009,LOC107696375,LOC107696371,LOC107578696,LOC108263699 coding downstream 325330 29325983 ~ 29335688 (-)
LOC122345544 ubr2,LOC107669566,LOC107696377 coding downstream 337333 29303143 ~ 29323685 (-)
brinp1 brinp1 coding downstream 390318 29174951 ~ 29270700 (-)
LOC122344834 LOC108430399,LOC107568487,LOC105913012,LOC103355419 coding downstream 716254 28943741 ~ 28944764 (-)
LOC122346138 astn2,LOC107675510,LOC107683760,LOC106563268,LOC106565912 coding downstream 977849 28337401 ~ 28683169 (-)
gpsm1b LOC107741501,LOC107704761,LOC107562333,LOC107597941,LOC107674924,LOC107744057 coding upstream 3048 29673233 ~ 29698626 (-)
fam78ab fam78ab,fam78a,LOC107704739,LOC107562331,LOC107674928,LOC107745627,LOC107741498,LOC107597938 coding upstream 168454 29838639 ~ 29846990 (-)
prrc2b prrc2b,LOC107704672 coding upstream 189367 29859552 ~ 29880103 (-)
LOC122344958 LOC107690080,LOC107566862,LOC107728455 coding upstream 240727 29910912 ~ 29919495 (-)
sapcd2 LOC107742165,LOC107660368,LOC107565658 coding upstream 258638 29928823 ~ 29943177 (-)
G40264 NA non-coding downstream 14005 29646617 ~ 29647013 (-)
G40083 NA non-coding downstream 1330542 28326897 ~ 28330476 (-)
G40081 NA non-coding downstream 1368081 28292726 ~ 28292937 (-)
G40079 pappaa,LOC107739977,LOC107558864,LOC107675511,LOC107556005,LOC107728218 non-coding downstream 1405811 28254921 ~ 28255207 (-)
G40076 pappaa,pappa,LOC107739977,LOC107675511,LOC107558864,LOC107728218,LOC107556005,LOC106563270 non-coding downstream 1414353 28246418 ~ 28246665 (-)
G40266 NA non-coding upstream 14943 29685128 ~ 29685727 (-)
G40268 LOC107741500,LOC107562332,LOC107704753 non-coding upstream 131009 29801194 ~ 29805802 (-)
LOC122344857 NA non-coding upstream 369269 30039454 ~ 30046148 (-)
LOC122345788 NA non-coding upstream 383427 30053612 ~ 30054797 (-)
G40422 NA non-coding upstream 435657 30105842 ~ 30106738 (-)
eng LOC107562335,LOC107704777,LOC107741503 other downstream 5957 29614719 ~ 29655061 (-)
G40182 brinp1,LOC107715673,LOC107674904 other downstream 170814 29460585 ~ 29490204 (-)
LOC122345120 LOC107728794,LOC107696375,LOC107590009,LOC107739482 other downstream 334903 29323982 ~ 29326115 (-)
G40080 pappaa,pappa,LOC107556005,LOC107558864,LOC107739977,LOC107675511,LOC107728218 other downstream 1396314 28255828 ~ 28264704 (-)
LOC122344874 NA other downstream 1765564 27886041 ~ 27895454 (-)
LOC122344966 LOC107749532,LOC107566852,LOC107742171,LOC107565644,LOC107690083 other upstream 254517 29924702 ~ 29928675 (-)
rnf170 rnf170,LOC107721034,LOC107687247 other upstream 417781 30087966 ~ 30093576 (-)
fubp3 fubp3,LOC107689604,LOC107687236,LOC106566971 other upstream 920658 30590843 ~ 30613141 (-)
G40711 NA other upstream 960843 30631028 ~ 30733360 (-)
G40713 lzts3,LOC107567954,LOC107687254,LOC107574519,LOC795227,LOC107665914 other upstream 1119448 30789633 ~ 30792719 (-)

Expression


Co-expression Network