CI01000004_15429682_15430354


Basic Information

Item Value
gene id CI01000004_15429682_15430354
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 15428518 ~ 15431049 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_15429682_15430354.mRNA
AACTTAAAACAAAGGAAAGATATTCATGTGTTCTCATCATCCATTTTACAGAAGCATTAAGGAGTGAATAACTGCTTATACACATGAATAGAACAGCGTGGCTCTTATAGGAAATAACAAGGTACTCCTTAAAGGTGTATGTGACTACAACAAATTAAAAACAGGATAAGGAATCAAGGAGAAACGAAGTAAAACACTTTCTTCTTAACACTAACCCTTTAACATTAGCCAAAAATAGAACTTTTTTGTTGTTATTAAAAACCAAACAAGAAAGCACAGCCCCGGTGAGAAAAAGTAACTAAGTGACGCAATTAGTTCCTTTTTTAGGGAGTAACGCAATATTGTAATGCATTACTTTTAAAAGTAACTTTCCCCAACACTGCTGAGTAAGGCATTATGGGTCTTTATAGCGATTTATGAACCACAATGCCATGAGCACATGGAAGAAATGTCTCCAGGGACATCCTGGATGTTTTCTAAAACAGTAATGTGTAATTATTTCTTAGAGCACTGATAAGGTCCTTAAAATAACAATGTAGATAGATATGCTGACGTAGCTTCCATTCACATCCAGAGCTCTAGAGTCAGCCCAGCCTCAGTGAACAAAACACCCTGACTCCACATACACTTCCCTCACTGCCACACCAGACCGCAGAAGATCAGTGTAGTCTGTGTCCTACATCACCTTTCTCAGCATGGCCAGATCCAGCTCAGCCCAGAACACCTGTAACTGGATTATGGCTGTCCTCACGTTGTGGTCTATGATCTCTCTGATCGTCATTGTGGTTTGGGTCACCTGGCCTCCGTTGGCTAGCCTTACACAATGCAGAGCAGCACATCAGGCCTTAATTGAAAAGATGGAGGGAGCTAAAGTGATAAAGGAAAAGGAGCAAGATGGCTTGAAATCCACCCTGGAGCTGAGCTCTAAAAACCAGACCAGACTGCAAGAAGAGCTGGAAAGTATTCTAGAGAGCCAGAGGGAAACCAACGCATCTCTAACAGAGAGTCTGCAACTGCAAATGATCCTAAAGGAAAATGTAACAGCTTTGGAAAATCAAAGACTCAGGCACCACAGTGAACACGCAAGACTTTTTTCTGAGCTGGCTCAACAAGAGGGTAGGAGAGCCAAATATGGGAATATTTTTAAAAATGATAAAGTTGGTGCAACCAAAGACGACATCTTTTACATGAGAGCATAATTATCTGTTTTGAGATGAGGAGTATATATACACTGTAAAAAATGAATGTGATTTTAACAGTAAAATATTGTAAAAACGTTACGGAAAAAAAATGTAAATAGGTTAACAGTAAGTTCCAGTACTATATACAGGGAAAAACTGTAAAAGCTCCTACCAGACATTTTATGTAATTTTCACAGTAAAATGCTGTAAATTTTACAATTTCTAGAAGTAAAAAAGAACAAATCAATGTATAATTTACAGTCAAAAACTGTAAACTGATATTCCCACAATTCCCTGTGTGACACTCCACATTTGAAAGTATTTTGTTTAAATAATCATGTTTCTTAATAGTTTTTGTTATCAGTTATGTACATTAGGGTTTTATGTTACATCTTCTGTTGTTTAATGAATGTTTATTGCATTATGTAAGTGTTGTGGGTTACCATGATGGTGTTTTGCGTTTGCGTGAATGACTCTGTGCACCCTCTTTATATTAGTATATACTTCAGCTCGTGGAAAAGCTACTTGTGATGAACTCTGATTCTTCATGTGGCTTTCTCTTTTACCACCTGCATTATTATGGTGGTTGTCAGTATATGTTAAAGGTACAAAACAGATTTTACTAGTAGTGTGCATTGTTGAATTTACTTGTTNNNNNNNNNNTTGAAAGTATTTTGTTTAAATAATCATGTTTCTTAATAGTTTTTGTTATCAGTTATGTACATTAGGGTTTTATGTTACATCTTCTGTTGTTTAATGAATGTTTATTGCATTATGTAAGTGTTGTGGGTTACCATGATGGTGTTTTGCGTTTGCGTGAATGACTCTGTGCACCCTCTTTATATTAGTATATACTTCAGCTCGTGGAAAAGCTACTTGTGATGAACTCTGATTCTTCATGTGGCTTTCTCTTTTACCACCTGCATTATTATGGTGGTTGTCAGTATATGTTAAAGGTACAAAACAGATTTTACTAGTAGTGTGCATTGTTGAATTTACTTGTTTACATTCAAATTTTCTTGTTTGTAAATTACAGTTTTATACTGTAAAATTGACAGTTTGTTCTGTAAATGTGTTTACAGTTTTTTTTCTGTATTTTTTACAAAATTATTCTGGCAACCACAGCTGCCAAAATTATTTTGTAAAAACTACGGAATATTTTTTACAGTGTAGGAAATTAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_15429682_15430354.mRNA True 2363 mRNA 0.35 2 15428518 15431049

Neighbor

gene id symbol gene type direction distance location
CI01000004_15416876_15425066 NA coding downstream 3354 15416876 ~ 15425164 (-)
CI01000004_15370117_15389832 PRKCI coding downstream 38686 15369754 ~ 15389832 (-)
CI01000004_15326982_15360355 SKILA coding downstream 68163 15326859 ~ 15360355 (-)
CI01000004_15300222_15308848 NADK, NADKB coding downstream 119577 15299660 ~ 15308941 (-)
CI01000004_15255165_15256033 APODA.1 coding downstream 170291 15254943 ~ 15258227 (-)
CI01000004_15434959_15441538 DAPK3 coding upstream 3830 15434879 ~ 15441538 (-)
CI01000004_15456870_15468826 NA coding upstream 25454 15456503 ~ 15468826 (-)
CI01000004_15483948_15538159 INSR, INSRA coding upstream 52899 15483948 ~ 15538159 (-)
CI01000004_15561061_15573201 HIAT1A, MFSD14A coding upstream 128860 15559909 ~ 15573201 (-)
CI01000004_15581505_15586825 NA coding upstream 150341 15581390 ~ 15586825 (-)
G34734 NA non-coding downstream 29741 15398571 ~ 15398777 (-)
G34733 NA non-coding downstream 30510 15397806 ~ 15398008 (-)
G34634 NA non-coding downstream 110296 15316241 ~ 15318222 (-)
G34611 NA non-coding downstream 135853 15286323 ~ 15292665 (-)
G34717 NA non-coding downstream 148376 15279943 ~ 15280142 (-)
G34768 NA non-coding upstream 245523 15676572 ~ 15682517 (-)
G34613 NA non-coding upstream 262041 15693090 ~ 15694289 (-)
G34595 NA non-coding upstream 265956 15697005 ~ 15700776 (-)
G34640 NA non-coding upstream 317600 15748649 ~ 15748929 (-)
G34608 NA non-coding upstream 332193 15763242 ~ 15765773 (-)
G34718 NA other downstream 146869 15281016 ~ 15281649 (-)
CI01000004_15086759_15087492 NA other downstream 338160 15086671 ~ 15087575 (-)
G34668 NA other downstream 375743 15051176 ~ 15052775 (-)
G34632 NA other downstream 403297 15011361 ~ 15025221 (-)
CI01000004_14827536_14831360 NA other downstream 600395 14827496 ~ 14831526 (-)
G34633 NA other upstream 356337 15787386 ~ 15787897 (-)
CI01000004_15832789_15836192 NA other upstream 401524 15832573 ~ 15836231 (-)
G34796 NA other upstream 429564 15860613 ~ 15863748 (-)
G34934 NA other upstream 970696 16401745 ~ 16421506 (-)
G34982 NA other upstream 1071676 16502725 ~ 16515974 (-)

Expression


Co-expression Network