CI01000004_15434959_15441538 (DAPK3)


Basic Information

Item Value
gene id CI01000004_15434959_15441538
gene name DAPK3
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 15434879 ~ 15441538 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_15434959_15441538.mRNA
ATGGCTGGCTTCAGGCAGGAGGATGTGGAGCTCTACTATGAAATGGGAGAGGAGTTAGGAAGTGGACAGTTTGCCATTGTGCGTAAATGTAAAGAAAAGAGCTCCGGATCAGATTATGCCGCCAAATTTATCAAGAAGAGACGGCTGTCATCCAGTCGACGGGGCGTGAGCCGAGAGGAGATCGAGCGAGAGGTGAACATCCTTCGAGAGATTCAGCACAGCAACATTATCACCCTCCACGACATCTTTGAGAACAAGACCGACGTGATCCTGATCCTGGAGCTGGTGTCTGGAGGGGAGCTGTTCGACTTCCTGGCTGAGAAGGAGTCGCTGACCGAGGAGGAGGCCACGCAGTTCCTCAAGCAGATCCTGGATGGAGTGCACTACCTCCACTCTAAACGCATAGCACACTTTGACTTGAAGCCAGAAAACATAATGCTGCTGGATAAAAATGTGCCGAACCCCAGAATCAAATTGATAGATTTTGGAATTGCGCATCAGATTAAGGATGGAAACGAATTTAAAAACATCTTTGGAACTCCTGAGTTTGTTGCACCAGAAATTGTGAATTATGAGCCCCTTGGCCTGGAGGCAGACATGTGGAGCATTGGAGTTATCACATATATACTCTTGAGTGGTGCTTCTCCATTTCTTGGCGAGACCAAACAAGAAACACTTACCAACATTTCAGCTGTCAACTATGACTTTGATGAGGAGTACTTCAGCAACACAAGTGAGCTCGCCAAGGACTTCATTCGCCGACTGCTGGTGATTAAGAGGCGTAACGTTCGACCTGAAGAGAGCGAGCGCAAGCCGGAGCGCAGGCGTCTGAAGACAACCCGTCTGAAGGAGTACACTATCAAATCCCACTCCAGCATGCCTCCTAACAACACATACATCAATTTCGAGCGCTTCTCGCAGGTCATGGAGGAGATAACCGCGGCTGAGGATGGCCTGCGAGAGCTGGAGAAGAACCAGCGCTCCTGCGGGGAGGACGTGGCCGCTCTGCTCTCCATCTATGAGGAGAAGGAAGGCTGGTACAAGGAGGAGAACGAAAGCATCGCAGCAGATCTCAGTCAGATCAAACAGGAGCTGCAGAAAGCACAAGCCCTGCGTAGACAGAGCCAGGAGGAGGCCCGAGCCGCCATGCTGTCGGCCAATGCCCTCAAGCGCAAGTTCGGTCGGTTGGAGAACCGCTATGAAGTGCTCGCTGAGCAGATGGTCTCTGAGGTGCGCTGGGTGGAAGAGCTGGTGCGCTCCATTTCGGCTGAAAACGACACTCGCAGCAACAGTATGGCTTGAGCTGCTCTGTTTGCTTTTAAAATGCAACAACTCCTTAATATCTTTGCTTGGTATGTGCAGGGCAGATATAGAGCATTAAA

Function

symbol description
dapk3 Enables protein kinase activity. Predicted to be involved in intracellular signal transduction and positive regulation of apoptotic process. Predicted to act upstream of or within protein phosphorylation. Located in cytoplasm and nucleus. Orthologous to human DAPK3 (death associated protein kinase 3).

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG:

id description
K08803 DAPK; death-associated protein kinase

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_15434959_15441538.mRNA True 1382 mRNA 0.51 7 15434879 15441538

Neighbor

gene id symbol gene type direction distance location
CI01000004_15429682_15430354 NA coding downstream 3830 15428518 ~ 15431049 (-)
CI01000004_15416876_15425066 NA coding downstream 9715 15416876 ~ 15425164 (-)
CI01000004_15370117_15389832 PRKCI coding downstream 45047 15369754 ~ 15389832 (-)
CI01000004_15326982_15360355 SKILA coding downstream 74524 15326859 ~ 15360355 (-)
CI01000004_15300222_15308848 NADK, NADKB coding downstream 125938 15299660 ~ 15308941 (-)
CI01000004_15456870_15468826 NA coding upstream 14965 15456503 ~ 15468826 (-)
CI01000004_15483948_15538159 INSR, INSRA coding upstream 42410 15483948 ~ 15538159 (-)
CI01000004_15561061_15573201 HIAT1A, MFSD14A coding upstream 118371 15559909 ~ 15573201 (-)
CI01000004_15581505_15586825 NA coding upstream 139852 15581390 ~ 15586825 (-)
CI01000004_15653837_15673610 NFATC4 coding upstream 212187 15653725 ~ 15673610 (-)
G34734 NA non-coding downstream 36102 15398571 ~ 15398777 (-)
G34733 NA non-coding downstream 36871 15397806 ~ 15398008 (-)
G34634 NA non-coding downstream 116657 15316241 ~ 15318222 (-)
G34611 NA non-coding downstream 142214 15286323 ~ 15292665 (-)
G34717 NA non-coding downstream 154737 15279943 ~ 15280142 (-)
G34768 NA non-coding upstream 235034 15676572 ~ 15682517 (-)
G34613 NA non-coding upstream 251552 15693090 ~ 15694289 (-)
G34595 NA non-coding upstream 255467 15697005 ~ 15700776 (-)
G34640 NA non-coding upstream 307111 15748649 ~ 15748929 (-)
G34608 NA non-coding upstream 321704 15763242 ~ 15765773 (-)
G34718 NA other downstream 153230 15281016 ~ 15281649 (-)
CI01000004_15086759_15087492 NA other downstream 344521 15086671 ~ 15087575 (-)
G34668 NA other downstream 382104 15051176 ~ 15052775 (-)
G34632 NA other downstream 409658 15011361 ~ 15025221 (-)
CI01000004_14827536_14831360 NA other downstream 606756 14827496 ~ 14831526 (-)
G34633 NA other upstream 345848 15787386 ~ 15787897 (-)
CI01000004_15832789_15836192 NA other upstream 391035 15832573 ~ 15836231 (-)
G34796 NA other upstream 419075 15860613 ~ 15863748 (-)
G34934 NA other upstream 960207 16401745 ~ 16421506 (-)
G34982 NA other upstream 1061187 16502725 ~ 16515974 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_016656 dapk3 coding NC_007113.7 CM002886.2 37469576 ~ 37478418 (-)