ube2g1a (ube2g1a,UBE2G1,ube2g1,LOC107597432)


Basic Information

Item Value
gene id ube2g1a
gene name ube2g1a,UBE2G1,ube2g1,LOC107597432
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 7993298 ~ 7999994 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238516.1
GGAGCGCATGCGCACACCGGAGCAGAATGTTGAGCAAAACGGACTAGAGCAGAAACGGAAAGACGCGCAAGCaaattcaaacatattttttctttagcGAAGTGAACAACTGTCGACCTAGAATATAacttattaaaaacatgacGGAGCCCCAGTCAGCACTGTTACTCAGGAGACAGCTAGCAGaactgaataaaaatcctGTGGAAGGTTTTTCAGCTGGTTTAATAGATGATAACGACCTCTACAGATGGGAAGTACTAATAATCGGCCCTCCAGATACACTTTATGAGGGTGGTGTTTTTAAAGCCCATCTTACGTTTCCCAAAGACTATCCTCTCAGGCCTCCTAAAATGAAGTTCATAACAGAAATATGGCATCCAAATGTTGACAAAAATGGTGATGTATGTATTTCGATATTACACGAGCCGGGGGAGGATAAATATGGTTATGAGAAACCAGAAGAGCGCTGGCTCCCCATTCACACCGTAGAGACCATCATGATTAGCGTCATCTCAATGCTAGCTGACCCCAATGGAGATTCCCCTGCCAATGTTGATGCAGCAaAAGAGTGGCGGGAAGACAGACATGGtgaattcaaaagaaaagttgCCCGCTGTGTAAGAAAGAGCCAAGAGACTGCCTTCGAGTGATATTCATCTAGCAGCTTGTAGCTTCACTATTTTCAGGGTCTCCAGTTGAGAAACAACATGGCACTGTTTTCTTGCACTCTACCACCCTATTGCTGGACTGGTTTTCATTGAATGTTGGCAGTAACAGACTGGCATTAATAGGCTGCAATAGAACATAAGGCCATCACAGATGCTGACAGAACACGCCAAGCAAGTGccaacaaaaagaagaaaaaacctaaacaattatgctctttttttttttttttttttttttttttttttttttcttcttttttttttccaagtctaCGAACTGATTCAAATTTTCAGGAAGAGATTGTAAAGATGTGTACATAGCACAGACATAAAAACcggataatatataataacttgTTCCTGTCCATCCAGCAAGACTTAGTACCAAATAAAATAGCAGTTCTGTAGTTAGAGTGTGACATCATGTAAAGTTCTTGAAGACTATAGTTCATCTCCCACCCTCCCGCTCTGGCTGCCTCGCATCTAGTGTGCATCAGATCCGTTACAGGTGCAAGTGGCCTCACGTACCCACTTGTCAGTGTGAACAAAAGTCTGCTTTGGCATTTCTCACTCGAACTCGATCCAGTTTTAGGGTGGGGAAGGCAGGGGTAAGCTATCGATAGGATTCAAAGCATGCTCGTCATGATGGAAGGCTTTCTCAATCGGGACACTTCAGGTAAAATAGCTGTAAAGCACGgtcattttcttattaattagGGGTCATGAAGGTATTTCTCTGATTTGGTTTTAAATGGGGTGGGCGGGGGGAAGGGGAGTGCTCTTATTTTGGCTTGAAAGGATGACTGCATTCTGAGTGTCAGGTTCTCATCTCTTCTCTTTTGTCGTCCATTTGAGGCAGGGAGGCAATGGCAAGGAAACCCATCAGATgtgattcttcttttttttctgcatgttttaagttctcttttgttttcaaaagtgCCTCCAGTTTAAACCGCTTGGCTTACGTGCCCTGCATCAAACAGGAGCTAAAGGGAGGAACGCGTTTAAGAACTGCTCAACATCCTCTCGAGCTTGTGTGAATGtgaggtttatttttattttttttttcataacccTTGTACCAGCATTATTTTGGTGTAGCAATAACTCTGCTTTGCCCACATAATGTGTGGACGTATTCAAATTGGATATTGGTGTGCGATTTCTAGTAAAGATTCTCCCTTGTATCagagcagattttttttttgtgggctTGACACCTCTTTTGTGTGGTTTCTTTGATAGGTTTCTTAGCCATGCTTTAAATGTAGATTTCTTGCAAACAGTTACTGGGATTTCagatgaggtgtgtgtgtgtgtgtgtgtgagattaaGGGTGATTGagcagaggtgtgtgtgtgtgcatgcctgTATCCCACTCTCTCCTCCCACAATCTTTAATTCTCTGGTTAATTTTATTCTGGCTCTGACAGACTACTGCAGTTCTTTTGCCTAATGTACAAAGACAAAATACCGatgtatatttttcatgttatggAAATTGTCACCTCTAGTGAGTtcttctaaaatataatttttttccaata

Function

symbol description
ube2g1a Predicted to enable ubiquitin conjugating enzyme activity. Predicted to be involved in proteasome-mediated ubiquitin-dependent protein catabolic process and protein polyubiquitination. Orthologous to human UBE2G1 (ubiquitin conjugating enzyme E2 G1).
ube2g1 Enables ubiquitin conjugating enzyme activity and ubiquitin protein ligase binding activity. Involved in protein K48-linked ubiquitination and protein K63-linked ubiquitination. Acts upstream of or within cellular protein catabolic process. Located in extracellular exosome.

NR:

description
ubiquitin-conjugating enzyme E2 G1

GO:

id name namespace
GO:0016567 protein ubiquitination biological_process
GO:0004842 ubiquitin-protein transferase activity molecular_function

KEGG:

id description
K10575 UBE2G1, UBC7; ubiquitin-conjugating enzyme E2 G1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238516.1 True 2221 mRNA 0.41 6 7993298 7999994

Neighbor

gene id symbol gene type direction distance location
ankfy1 ankfy1,LOC107597410,LOC107664513,LOC107587357,LOC107664399 coding downstream 768 7976647 ~ 7992530 (-)
zzef1 zzef1,LOC107712353,LOC107748500,LOC107664397,LOC107598082,LOC107664510 coding downstream 19737 7938171 ~ 7973561 (-)
atp2a3 atp2a3,LOC107597397,LOC107664518,LOC107712375,LOC107587360,LOC107748501,LOC107664409 coding downstream 81324 7865137 ~ 7911974 (-)
camkk1a camkk1a,camkk1,LOC107587369,LOC107664416,LOC107712376,LOC107664519 coding downstream 163533 7794750 ~ 7829765 (-)
si:dkey-220k22.1 LOC107664520,LOC107597375,LOC107748505,LOC107664410,LOC107712354 coding downstream 212353 7725961 ~ 7780945 (-)
ruvbl2 ruvbl2,LOC107664527,LOC107677411,LOC107597476,LOC107587476,LOC107722783 coding upstream 102591 8102585 ~ 8108024 (-)
ftr83 ftr83,LOC107664511,LOC107712363,LOC107587475,LOC107722782,LOC107677412,LOC108429748 coding upstream 108721 8108715 ~ 8114097 (-)
atp5l atp5l,LOC107664523,LOC107597515,LOC107587353,LOC107722787,LOC107677432 coding upstream 129127 8129121 ~ 8131172 (-)
pdzd3b LOC107598091,LOC107722765,LOC107677407,LOC107587439,LOC107664508 coding upstream 131523 8131517 ~ 8136607 (-)
abcg4a abcg4a,abcg4,LOC107717882,LOC107722792,LOC107677424,LOC107587350,LOC108429752 coding upstream 138114 8138108 ~ 8154780 (-)
G34265 NA non-coding downstream 55927 7936511 ~ 7937371 (-)
G34260 NA non-coding downstream 131469 7861475 ~ 7861829 (-)
G34231 NA non-coding downstream 233133 7717573 ~ 7760165 (-)
G34248 NA non-coding downstream 280804 7712043 ~ 7712494 (-)
G34214 NA non-coding downstream 349069 7642970 ~ 7644229 (-)
G34275 NA non-coding upstream 13353 8013347 ~ 8013551 (-)
G34276 NA non-coding upstream 13692 8013686 ~ 8013937 (-)
G34290 NA non-coding upstream 100492 8100486 ~ 8100700 (-)
G34314 NA non-coding upstream 197474 8197468 ~ 8260129 (-)
G34310 LOC107722772,LOC107587343,LOC107717878,LOC107597552 non-coding upstream 199236 8199230 ~ 8200082 (-)
si:dkey-220k22.3 NA other downstream 271540 7718565 ~ 7721758 (-)
LOC122345606 LOC107712378 other downstream 281474 7706970 ~ 7711824 (-)
G33998 LOC108444092 other downstream 596145 7382346 ~ 7397153 (-)
usp20 usp20,LOC107691016,LOC107693839,LOC107710745 other downstream 1050095 6922846 ~ 6943203 (-)
G33758 LOC107596916,LOC107710760,LOC107700938,LOC107587412,LOC107693817 other downstream 1167116 6824171 ~ 6826182 (-)
si:ch211-117m20.4 si:ch211-117m20.4,LOC107663429,LOC107597540,LOC107717881,LOC107677428,LOC107677427 other upstream 160883 8160877 ~ 8164026 (-)
G34372 zbtb44,LOC107597664,LOC107717865,LOC107677410,LOC107587334,LOC107722796 other upstream 411888 8411882 ~ 8414806 (-)
timm8b timm8b,LOC107717885,LOC107598437 other upstream 429706 8429700 ~ 8431586 (-)
LOC122345093 NA other upstream 674235 8674229 ~ 8677718 (-)
G34580 LOC107681240,LOC107709820,LOC107560234,LOC107715750 other upstream 929476 8929470 ~ 8930053 (-)

Expression


Co-expression Network