gusb (gusb,LOC107719352,LOC107701859,LOC107654306,LOC107734369,LOC104964597,LOC107591494)


Basic Information

Item Value
gene id gusb
gene name gusb,LOC107719352,LOC107701859,LOC107654306,LOC107734369,LOC104964597,LOC107591494
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 31142577 ~ 31155113 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238526.1
CGCACCGGAAGTGCTTCAGCGTAAACAGCCCGTCGTCGAGCGGAGCGCCATGGGCTCGAGCGGAGCGGCGACGCGCGTGCTTCTGGCCGCTCTGTGCGGCGTGTGCCAGGCGCTGCGGGGCGGGATGCTGTTCCCCACGGAGTCTCCCTCCAGAGAAGTGAAGGACGCGAGCGGCCTGTGGAGCTTCAGGGCGGACCTGTCCCCGGAGCGGAACCGCGGCTTCGAGCAGGAGTGGTACAAGAGTCCGCTCGCGGAGACGGGGCCCGTTATTGACATGCCGGTGCCGTCCAGCTACAACGACATCACACAAGACAGCAAAATCCGTGACTTCATCGGCTGGGTGTGGTATGAGAAGAGCGTATGGGTGCCGTCGCGCTGGATCCAGGACCGGGAAACACGGATCGTGCTCCGAGTGGGAAGCGCTCACTATCACTCAGTGCTTTGGGTGAACGGGGTCGAGGTGACCGAGCACGTGGGCGGCCATCTCCCGTTCGAGGCGGACATCGGCGGCGTCCTGCGGAGGACGAGCGGCGGCACGTGTCGGATCACCATCGCCGTGAACAACACTTTAACTCTTGAGACGCTTCCACCGGGAACCATCCAGTACATGAGCGATCGCACCAGATACCCGGCTGGCTACTTCATTCAGAACACCAACTTTGATTTCTTCAACTACGCTGGACTCCACCGAGCGGTCCTGCTGTACACCACACCGAAGGCGCACATTGATGACATCACAGTGGAGACGACCTTCTCTGATAACATCGGGCTGGTCGGGTTTAACGTGTCCGTGCTGGGCAGCTCTAAACCCGCTGTGAAGGTCACGCTCTTCGCTCAGGACGGCAGATGCGTGGCTTCGGCCGACGGCTCCAGAGGGGTCCTCAAAGTCACAGACGTCAACCTGTGGTGGCCCTATCTGATGCACGAAAACCCAGCTTACCTGTACTCCATGGAGGTTCAGGCGACAGCAGAGGACGGACAGACGGACGTTTACACTCTTCCTGTGGGAATTCGGACCGTTAAAGTCACCAGCACACAGTTTCTCATCAACAACAAGCCCTTTTACTTCCACGGAGTCAACAAACACGAGGACGCAGACATCCGCGGGAAGGGCTTCGACTGGCCTCTGGCGGTGAAGGACTTCAACCTGATGAAGTGGATGGGAGCCAACTCGTTCCGCACCAGTCACTATCCCTACGCCGAGGAGATCCTGCAGACGGCCGACCGCCACGGCATCGTCGTCATAGACGAGTGTCCCGGAGTAGGAATCAAAGACATACGCAGTTTCGGGAACGTCTCTCTGGCTCATCACCTGACGGTCATGGAAGAGCTGGTCCGGCGTGATAAGAACCACCCGTCTGTGGTCATGTGGTCTGTGGCCAATGAGCCGGCGTCTGAAATGCAGCCCGCCGGATTCTACTTCAAGGAGCTGGTGTCTCATACGAAATCTCTGGATTCGTCTCGGCCGGTCACGTACATCACAGCCAGCAACTACGCCAGAGATCTGGGGGCTCCGTACGTGGACGTGATCTGCGTGAACAGCTATTTCTCGTGGTATCACGACCCGGGTCACACAGAGATCATCGCTCTTCAGCTCAACACTCAGTTTGATAACTGGTACGGCAAATACCAGAAACCCATCATCCAGAGCGAGTACGGAGCAGACGCCGTGGCCGGCCTCCACAGCGATCCACCCATGATGTTCACAGAGGAGTATCAAAAGACGGTCCTGCAGAACTACCACAACGTGTTCGACCAGAAGAGGAAGGAGTTTGTGATTGGAGAACTGATCTGGAACTTCGCCGACTTCATGACGGCTCAAACTATCACTCGAGTGGTTGGGAATAAGAAGGGAGTCTTCACTCGGCAGCGGCAGCCCAAAGCCGGAGCGTTTCTGCTGCGAGAGAGATACTGGAGGATCGCCAATGAGACAGGTGTGCTGCCCACCTGGGCCAGGTATCCCTGCCAGTGAGCCAGATTAGCTGCTTCCTGTGACCAGGTCAGAACGGACTGTTTATCAAGCGGAAGTGCCTTATATGTGCCACACTATGACAATCACGCCTGTGGGAGAATCACAGACTCGCGGGAATCCACATGCtgtttgttcttcctgaagacaCAACTTTCTATCGATTGTTTTGATTTGCTTCTGAATCACAGTAACACTATTAAGCTGGAACAGGAACgtttatttccttttaatgTGCCTTTTTGTGGCGTTCAGACTCTGGGATTTTTATTGTGAACGTTTGCAATGATATTCAGATGAGAGAATCTTTAATGAAACCTGTGGAGAACGTGACCGGCTCATCTTTAACCTCTAAAAAGATCATAATTCtgctttaaagaaacatttaggACCGGCAATTgcattatttagcattaatattAAGACACATTTATCCCCAATTTCAAAACACCTAATAATATTTGGTTTACTTCTAATGCagatttctataataataataataatactgttatgtaattatatctaataataatCCACTAAGGATCATTAACATGATTTAAATATGCTTATATTATGGCTATATTAACTTCATTcagaattatatttcaaaaatagctGCATTGCAGTAATTGCAATATCTAATGAAAATCTAATAAGGATCATTattgagaataataataataataataataataatagcaaaagaAATTTTTTTGAGGAGAAATGTGAGCCAGGTTTCTgcttaatgaataaatgtcagTGTAAATATACTCATGCTGTGTATTTCACTGTCATTTGTTATGAATTTTTATCTTCTGGTAATAATTGGCTCCAGTCTTTTAATGACCAAGATATTTCTGATTTTAGTttcttctctgtgtgtgtgtgtgagtgaccaGTGACGTGttgatttttatactgtactttaATTACTTCATGATGAATCTTTAGTACATGTGCACATTGCAGACATTCCTCAACGATGGCATCCAAATAAACCACATTCCATCAGA
>XM_043238527.1
TTCCCCACGGAGTCTCCCTCCAGAGAAGTGAAGGACGCGAGCGGCCTGTGGAGCTTCAGGGCGGACCTGTCCCCGGAGCGGAACCGCGGCTTCGAGCAGGAGTGGTACAAGAGTCCGCTCGCGGAGGTCACACGGGGCCCGTTATTGACATGCCGGTGCCGTCCAGCTACAACGACATCACACAAGACAGCAAAATCCGTGACTTCATCGGCTGGGTGTGGTATGAGAAGAGCGTATGGGTGCCGTCGCGCTGGATCCAGGACCGGGAAACACGGATCGTGCTCCGAGTGGGAAGCGCTCACTATCACTCAGTGCTTTGGGTGAACGGGGTCGAGGTGACCGAGCACGTGGGCGGCCATCTCCCGTTCGAGGCGGACATCGGCGGCGTCCTGCGGAGGACGAGCGGCGGCACGTGTCGGATCACCATCGCCGTGAACAACACTTTAACTCTTGAGACGCTTCCACCGGGAACCATCCAGTACATGAGCGATCGCACCAGATACCCGGCTGGCTACTTCATTCAGAACACCAACTTTGATTTCTTCAACTACGCTGGACTCCACCGAGCGGTCCTGCTGTACACCACACCGAAGGCGCACATTGATGACATCACAGTGGAGACGACCTTCTCTGATAACATCGGGCTGGTCGGGTTTAACGTGTCCGTGCTGGGCAGCTCTAAACCCGCTGTGAAGGTCACGCTCTTCGCTCAGGACGGCAGATGCGTGGCTTCGGCCGACGGCTCCAGAGGGGTCCTCAAAGTCACAGACGTCAACCTGTGGTGGCCCTATCTGATGCACGAAAACCCAGCTTACCTGTACTCCATGGAGGTTCAGGCGACAGCAGAGGACGGACAGACGGACGTTTACACTCTTCCTGTGGGAATTCGGACCGTTAAAGTCACCAGCACACAGTTTCTCATCAACAACAAGCCCTTTTACTTCCACGGAGTCAACAAACACGAGGACGCAGACATCCGCGGGAAGGGCTTCGACTGGCCTCTGGCGGTGAAGGACTTCAACCTGATGAAGTGGATGGGAGCCAACTCGTTCCGCACCAGTCACTATCCCTACGCCGAGGAGATCCTGCAGACGGCCGACCGCCACGGCATCGTCGTCATAGACGAGTGTCCCGGAGTAGGAATCAAAGACATACGCAGTTTCGGGAACGTCTCTCTGGCTCATCACCTGACGGTCATGGAAGAGCTGGTCCGGCGTGATAAGAACCACCCGTCTGTGGTCATGTGGTCTGTGGCCAATGAGCCGGCGTCTGAAATGCAGCCCGCCGGATTCTACTTCAAGGAGCTGGTGTCTCATACGAAATCTCTGGATTCGTCTCGGCCGGTCACGTACATCACAGCCAGCAACTACGCCAGAGATCTGGGGGCTCCGTACGTGGACGTGATCTGCGTGAACAGCTATTTCTCGTGGTATCACGACCCGGGTCACACAGAGATCATCGCTCTTCAGCTCAACACTCAGTTTGATAACTGGTACGGCAAATACCAGAAACCCATCATCCAGAGCGAGTACGGAGCAGACGCCGTGGCCGGCCTCCACAGCGATCCACCCATGATGTTCACAGAGGAGTATCAAAAGACGGTCCTGCAGAACTACCACAACGTGTTCGACCAGAAGAGGAAGGAGTTTGTGATTGGAGAACTGATCTGGAACTTCGCCGACTTCATGACGGCTCAAACTATCACTCGAGTGGTTGGGAATAAGAAGGGAGTCTTCACTCGGCAGCGGCAGCCCAAAGCCGGAGCGTTTCTGCTGCGAGAGAGATACTGGAGGATCGCCAATGAGACAGGTGTGCTGCCCACCTGGGCCAGGTATCCCTGCCAGTGAGCCAGATTAGCTGCTTCCTGTGACCAGGTCAGAACGGACTGTTTATCAAGCGGAAGTGCCTTATATGTGCCACACTATGACAATCACGCCTGTGGGAGAATCACAGACTCGCGGGAATCCACATGCtgtttgttcttcctgaagacaCAACTTTCTATCGATTGTTTTGATTTGCTTCTGAATCACAGTAACACTATTAAGCTGGAACAGGAACgtttatttccttttaatgTGCCTTTTTGTGGCGTTCAGACTCTGGGATTTTTATTGTGAACGTTTGCAATGATATTCAGATGAGAGAATCTTTAATGAAACCTGTGGAGAACGTGACCGGCTCATCTTTAACCTCTAAAAAGATCATAATTCtgctttaaagaaacatttaggACCGGCAATTgcattatttagcattaatattAAGACACATTTATCCCCAATTTCAAAACACCTAATAATATTTGGTTTACTTCTAATGCagatttctataataataataataatactgttatgtaattatatctaataataatCCACTAAGGATCATTAACATGATTTAAATATGCTTATATTATGGCTATATTAACTTCATTcagaattatatttcaaaaatagctGCATTGCAGTAATTGCAATATCTAATGAAAATCTAATAAGGATCATTattgagaataataataataataataataataatagcaaaagaAATTTTTTTGAGGAGAAATGTGAGCCAGGTTTCTgcttaatgaataaatgtcagTGTAAATATACTCATGCTGTGTATTTCACTGTCATTTGTTATGAATTTTTATCTTCTGGTAATAATTGGCTCCAGTCTTTTAATGACCAAGATATTTCTGATTTTAGTttcttctctgtgtgtgtgtgtgagtgaccaGTGACGTGttgatttttatactgtactttaATTACTTCATGATGAATCTTTAGTACATGTGCACATTGCAGACATTCCTCAACGATGGCATCCAAATAAACCACATTCCATCAGA

Function

symbol description
gusb Predicted to enable beta-glucuronidase activity and carbohydrate binding activity. Predicted to be involved in glucuronoside catabolic process. Predicted to act upstream of or within carbohydrate metabolic process. Predicted to be located in lysosome. Predicted to be active in extracellular space. Human ortholog(s) of this gene implicated in Sly syndrome. Orthologous to human GUSB (glucuronidase beta).

NR:

description
PREDICTED: beta-glucuronidase

GO: NA

KEGG:

id description
K01195 uidA, GUSB; beta-glucuronidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238526.1 True 2982 mRNA 0.50 12 31142577 31155113
XM_043238527.1 False 2857 mRNA 0.49 12 31142577 31154983

Neighbor

gene id symbol gene type direction distance location
rplp0 rplp0,LOC107654305 coding downstream 29844 31108723 ~ 31112733 (-)
LOC122344691 NA coding downstream 61312 31074043 ~ 31081265 (-)
rcl1 rcl1,LOC107701854,LOC107655287 coding downstream 78222 31053924 ~ 31064355 (-)
mcc mcc,LOC106565572 coding downstream 89988 30978593 ~ 31052589 (-)
cux2a NA coding downstream 191089 30942514 ~ 30951488 (-)
ca4a LOC107663683,LOC107654307,LOC107734368,LOC107719346 coding upstream 36050 31191163 ~ 31196967 (-)
LOC122345520 LOC107663881,LOC107725093,LOC107654310,LOC107734346,LOC107563427 coding upstream 214697 31369810 ~ 31454508 (-)
hspb1 LOC107591466,LOC107667824,LOC107725127,LOC107562193,LOC107654311,LOC107734358 coding upstream 343376 31498489 ~ 31503030 (-)
srrm3 srrm3,LOC107591468,LOC107734356,LOC107562180,LOC107725131,LOC107654313 coding upstream 351366 31506479 ~ 31567684 (-)
LOC122344718 LOC107725156,LOC107654314,LOC107591470,LOC107734345,LOC100535945,LOC107562196 coding upstream 413667 31568780 ~ 31590397 (-)
G40798 NA non-coding downstream 47654 31088192 ~ 31094923 (-)
G40794 NA non-coding downstream 103120 31038405 ~ 31039457 (-)
G40782 NA non-coding downstream 164255 30977609 ~ 30978322 (-)
LOC122344702 NA non-coding downstream 167694 30974318 ~ 30974883 (-)
LOC122344701 NA non-coding downstream 179070 30959444 ~ 30963507 (-)
LOC122344940 NA non-coding upstream 65704 31220817 ~ 31222257 (-)
G40841 NA non-coding upstream 117573 31272686 ~ 31273001 (-)
G40842 NA non-coding upstream 125064 31280177 ~ 31280431 (-)
G40995 NA non-coding upstream 267972 31423085 ~ 31506097 (-)
G40996 NA non-coding upstream 280536 31435649 ~ 31495269 (-)
G40752 hspa5,LOC107686379,LOC107743071,LOC107687227,LOC107567952,LOC107734417,LOC107734415,LOC107686377 other downstream 316219 30817732 ~ 30826358 (-)
G40713 lzts3,LOC107567954,LOC107687254,LOC107574519,LOC795227,LOC107665914 other downstream 349858 30789633 ~ 30792719 (-)
G40711 NA other downstream 409217 30631028 ~ 30733360 (-)
fubp3 fubp3,LOC107689604,LOC107687236,LOC106566971 other downstream 529436 30590843 ~ 30613141 (-)
rnf170 rnf170,LOC107721034,LOC107687247 other downstream 1049001 30087966 ~ 30093576 (-)
LOC122344987 LOC107591496,LOC107663763,LOC107725109,LOC107734348,LOC107563429,LOC107654309 other upstream 176236 31331349 ~ 31350449 (-)
apooa apoo other upstream 547340 31702453 ~ 31711737 (-)
G41035 LOC107734367,LOC107665727,LOC107725151,LOC107591476,LOC107654325,LOC563292 other upstream 566157 31721270 ~ 31722906 (-)
tnca zmp:0000000846,LOC107715542,LOC107557573,LOC107591511,LOC102306937,LOC107725145 other upstream 958783 32113896 ~ 32174064 (-)
LOC122346090 LOC107704013,LOC107725152,LOC107748063,LOC107654332,LOC107557589,LOC107594564 other upstream 1058918 32214031 ~ 32293782 (-)

Expression


Co-expression Network