LOC122344908 (LOC107599196,LOC107663386)


Basic Information

Item Value
gene id LOC122344908
gene name LOC107599196,LOC107663386
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 14324343 ~ 14326767 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238535.1
CTGTTGTCACATTGGTCAAACATGAACCGGTCCATCTTTCTTCTGTCCTTGGTCATTCTGAGCTGCCTGACTTTTACTGAGGGTCAGCGGATGTTCATAAGCAGGCGATGCTTGTGCTCCAGAACATATGAGAGTGTGCAGCCTAGAAACATCAAGGAGTGGAGAGTGCATGAACCAAGCGCATCCTGTAAAACCACTGAGATTATTGTGATTTTGAAGAAACCTCACAAAAAAGTCTGCCTGAATCCCAATTCAAAACTGGGACGCAAACTGCTAGAAATGAATTAGAGCTGATTTCCATGAACACACCGGATCATCCATGGATGAAATATCAAGAAGTGCCCAGGGTTCTTTTGTGGTTGCAGCTTTGAAGATAAGGAGAAATGGTGTCTCTCGGTAAACTGATAGCCTATCATTAAAAAAGGATAAAAGATAACTTAATGACCCAACTCTTACTGTAAGCAATAGCATACAGTCAAACAGATGCACACCTCtcgcatttcttttcttttttcagctgCAGTAGATCAAGACTGAACACACTTTCTAAAAAAGGCTAGGCTATGACACACACAGAATACTCTGTAATTAGgtttaaataaaaggttttattcaATTGAGTGTATCATAAAAAGGAGAGGCATGAAAGGGAGGAATTAGATTGGCATGGTTTTCTTGCACCAAATTAAAGTTCAGTAGGACTGAAATTATCAGTCCAAAAgagaatgttatttttgttcGTTTATTTgttcgttgttgttgttgttttgtaattggAGTGaatgttcatgttgttttttataattaatattttttaatgaaatatccATTCATGTTGAATTAAGAAAGTCTTAAATCTGTTAGGGTATCTGGTCAAGCTACACCGCcttgttttcagtgtttctgcTAAAGAAGCCAATAAAAcctgtttaaaaata

Function

NR:

description
PREDICTED: C-X-C motif chemokine 10-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238535.1 True 938 mRNA 0.37 3 14324343 14326767

Neighbor

gene id symbol gene type direction distance location
cxcl11.8 NA coding upstream 1646 14321528 ~ 14322697 (+)
LOC122345144 NA coding upstream 3420 14315699 ~ 14320923 (+)
LOC122345143 NA coding upstream 9742 14311644 ~ 14314601 (+)
LOC122345145 NA coding upstream 14267 14306837 ~ 14310076 (+)
si:ch211-271e10.2 NA coding upstream 36903 14283080 ~ 14287440 (+)
fras1 fras1,LOC107663364,LOC107661219,LOC107752371,LOC107746850 coding downstream 58900 14385667 ~ 14455284 (+)
LOC122345512 LOC107752366,LOC107661220,LOC107663395,LOC107599216,LOC107663363,LOC107746851 coding downstream 128650 14455417 ~ 14458914 (+)
LOC122345511 LOC107663395,LOC107599216,LOC107567471,LOC107752366,LOC107752365,LOC107661220 coding downstream 132687 14459454 ~ 14463721 (+)
bmp2k bmp2k,LOC107752364,LOC107746780,LOC107599185,LOC107661221 coding downstream 139741 14466508 ~ 14493471 (+)
prdm8b prdm8,prdm8b,LOC107744860,LOC107746783,LOC107661225,LOC107663390 coding downstream 304155 14630922 ~ 14635776 (+)
G36420 LOC107663407,LOC107599223,LOC107746393,LOC107661199 non-coding upstream 276849 14046777 ~ 14047494 (+)
G36408 LOC107746439,LOC107663381,LOC107599230 non-coding upstream 316941 14005771 ~ 14007402 (+)
G36406 NA non-coding upstream 320812 14000526 ~ 14003531 (+)
G36405 NA non-coding upstream 324006 13999100 ~ 14000337 (+)
G36332 NA non-coding upstream 349584 13974532 ~ 13974759 (+)
G36507 LOC107663397,LOC107567468,LOC107599188,LOC107746779 non-coding downstream 15156 14341923 ~ 14342507 (+)
G36509 LOC107567468,LOC107752360,LOC107661217 non-coding downstream 16397 14343164 ~ 14343769 (+)
G36510 NA non-coding downstream 19117 14345884 ~ 14346835 (+)
G36573 NA non-coding downstream 139132 14465899 ~ 14466241 (+)
G36570 NA non-coding downstream 166781 14493548 ~ 14528933 (+)
LOC122345142 NA other upstream 19039 14300043 ~ 14305304 (+)
G36495 NA other upstream 31843 14290420 ~ 14292500 (+)
ins ins,LOC107596207 other upstream 338637 13984097 ~ 13985706 (+)
LOC122346073 LOC107654625,LOC107597279,LOC107741224,LOC107696048,LOC107727161 other upstream 1516992 12803789 ~ 12807351 (+)
iscu si:ch211-191d15.2,iscu,LOC107597282,LOC104937683 other upstream 1619098 12703352 ~ 12705245 (+)
LOC122345214 NA other downstream 6256 14333023 ~ 14337765 (+)
mrpl1 LOC107663378,LOC107746869,LOC107752362,LOC107599195 other downstream 20795 14347562 ~ 14349991 (+)
fgf5 fgf5,LOC107599194,LOC107746784,LOC107663393,LOC107661278,LOC107602014,LOC107744874 other downstream 319178 14645945 ~ 14652911 (+)
G36640 NA other downstream 391765 14718532 ~ 14720487 (+)
LOC122345998 LOC107718355,LOC107676655,LOC107746825,LOC107680877,LOC107553589,LOC107552586 other downstream 2065030 16391797 ~ 16395562 (+)

Expression


Co-expression Network