stip1 (stip1,LOC107564074,LOC107674894,LOC107571522,LOC107755657,LOC107702934)


Basic Information

Item Value
gene id stip1
gene name stip1,LOC107564074,LOC107674894,LOC107571522,LOC107755657,LOC107702934
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 26639154 ~ 26647535 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238542.1
GGTCTACAGTCATAATAGGCAGAGAGGCGGGGCGACGCTAGTGTCTTGGTAGATTCTGGAACCTCATGCCCACGCTATGGAGAAAGCATCGCAACTGAAAGACCAAGGAAACAAGGCGCTGAGCGCAGGAAATGTTGACGAGGCAGTTAGGTGCTACACTGAGGCCCTGACATTAGACCCTTCCAATCACGTCCTCTTCAGCAACCGCTCTGCCGCCTATGCCAAGAAGGGCGACTATGACAATGCCCTGAAAGATGCCTGCCAAACCATAAAGATTAAGCCAGATTGGGGCAAGGGCTACTCAAGAAAAGCAGCTGCTTTGGAGTTTCTTGGGCGACTAGAAGATGCCAAAGCAACCTATCAGGAGGGGATACGCCAAGAGCCGTCCAATCAGCAACTCAAGGAGGGACTTCAGAGCATTGAAGCTCGCTTAGCTGAGCGAAAGATGATGAACCCATTTTCCATTCCCAACTTGTATGAAAAGCTGGAGGGTGACCCTCGAACCAGAGCGCTCTTGTCTGACCCCAGCTACAGGGAGCTGCTGGAGCAGCTCAGGAACAAGCCCTCAGAGCTTGGCACAAAACTGCAAGACCCTCGTGTAATGACCACTCTCTCGGTGCTGCTGGGGCTGGATCTAGCTGGCATGGATGAAGAAGAGGAACCGACTCCACCCCAACCCCCTAAACCCAAAGAGACGGCTCCGCCTCCTCCCAAAGAGGAAGACCTGCCAGAGAACAAGAGAATGGCTTTGAAGGAGAAGGAACTGGGAAATGCAGCATATAAGAAGAAAGACTTTGCTACTGCACTGAAGCACTATGAAGAAGCCCTAAAGCACGATCCCACCAACATGACCTATCTGTCAAACCAAGCAGCTGTGCATTTTGAAAAGGGGGACTTTGATAAATGCAGAGAGCTTTGTGAGAAAGCCATTGAGGTGGGAAGAGAGAACCGGGAAGATTACAGACAGATTGCCAAGGCATACGCCAGGATCGGTAACTCTTATTTTAAGCAGGAGAAGTACAAAGAGGCAGTCCAGTCTTTTAATAAGAGTCTGACAGAGCATCGCACACCTGAGGTCCTCAAGAAATGCCAGCAGGCAGAAAAGATTTTAAAGGAACAGGAGAAGCAGGCCTACATTAATCCAGATTTGGccctggaagaaaaaaacaaaggaaatgaTGCCTTCCAGAAGGGCGACTATCCTTTGGCCATGAAACATTACTCGGAGGCCATCAAGAGAAACCCTTACGATGCAAAACTCTTCAGCAACAGAGCTGCCTGTTACACCAAACTACTGGAGTTCCAGCTGGCCCTCAAGGACTGTGAGGAGTGCATTAAACTGGATCCAAACTTCattaaggGTTACACACGCAAGGGAGCTGCACTGGAGGCGATGAAGGACTTCTCTAAAGCAATGGATGTGTACCAGAAAGCTCTTGAGCTTGACTCCAATTCAAAGGAGGCCACAGAGGGTCTGCAGCGCTGTATGGTGAGCCAAGCAATGCGTAACGACAGCCCAGAGGATGTGAAACGGAGGGCCATGGCCGACCCAGAGGTGCAGCAGATCATGAGTGATCCTGCCATGCGCATGATCTTAGAGCAGATGCAGAAAGACCCACAGGCCCTCAGCGATCATCTAAAGAACCCCGTCATCGCTCAGAAAATTCAGAAACTGATAGATGTTGGGCTAATAGCAATTCGGTGATCAAAGGAACCAGAAGAAACCCCAGGACATTATTCATCTACAGAACAGCTACAGGAAGTCTACAAAGGATGGCGGCGTTCCAAACAACATATTAAACGGTCACCTTAACCCTTCTCCTCCAACtcattccaatttttttttttaagccttaaTTGGATTAAAAAAGTGGCCAATTGGTATTGCCTCAGCACTACATTCACTATCATCAGTTGTCATGGTTTTCAGACGTTTTATTGTTTctacattaatgtattaaagaGTGGGGTTTGGACCTTCACATTAAACACA

Function

symbol description
stip1 Predicted to enable Hsp90 protein binding activity. Orthologous to human STIP1 (stress induced phosphoprotein 1).

NR:

description
PREDICTED: stress-induced-phosphoprotein 1

GO: NA

KEGG:

id description
K09553 STIP1; stress-induced-phosphoprotein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238542.1 True 1993 mRNA 0.48 14 26639154 26647535

Neighbor

gene id symbol gene type direction distance location
im:7154036 LOC107730539,LOC107674895,LOC107564073,LOC107755658,LOC107702932,LOC107571525 coding downstream 1289 26626193 ~ 26637865 (-)
kat5b kat5b,kat5a,kat5,LOC107597226,LOC107592273,LOC107732605,LOC107680373,LOC107687657,LOC108427799 coding downstream 14138 26615142 ~ 26625016 (-)
LOC122345741 pitpnb,LOC106585622,LOC108437411,LOC106580376 coding downstream 28759 26590925 ~ 26610395 (-)
LOC122345107 NA coding downstream 72731 26553706 ~ 26566423 (-)
LOC122344705 mn1,mn1b coding downstream 94641 26532335 ~ 26544513 (-)
flrt1a LOC107695997,LOC107741023,LOC107702935,LOC107564076,LOC107755656,LOC107571526 coding upstream 25562 26673097 ~ 26719746 (-)
rps6ka4 rps6ka4,LOC107758164,LOC107698546,LOC107567284,LOC107702937,LOC108427766,LOC103040978 coding upstream 122396 26769931 ~ 26789018 (-)
rom1a LOC107758165,LOC107567283,LOC107698544,LOC107755654 coding upstream 148720 26796255 ~ 26800046 (-)
si:dkey-273o13.3 LOC107758159,LOC107567285,LOC107698543,LOC107755655 coding upstream 154849 26802384 ~ 26809937 (-)
cdca5 cdca5,LOC107567277,LOC107698540 coding upstream 169385 26816920 ~ 26820637 (-)
LOC122344941 NA non-coding downstream 265332 26372619 ~ 26373822 (-)
G39585 NA non-coding downstream 485451 26153465 ~ 26153703 (-)
G39579 NA non-coding downstream 520071 26118474 ~ 26119083 (-)
G39574 NA non-coding downstream 855563 25782979 ~ 25783591 (-)
G39572 NA non-coding downstream 910684 25728237 ~ 25728470 (-)
G39712 NA non-coding upstream 229055 26876590 ~ 26883175 (-)
G39738 LOC107705276,LOC107586737,LOC107671348,LOC107663665,LOC107721875 non-coding upstream 434466 27082001 ~ 27084786 (-)
LOC122344810 LOC107662059,LOC107548517 non-coding upstream 468432 27115967 ~ 27146962 (-)
LOC122344809 LOC107671984 non-coding upstream 479594 27127129 ~ 27128456 (-)
LOC122344808 LOC107671984 non-coding upstream 492880 27140415 ~ 27142658 (-)
LOC122344921 NA other downstream 1070468 25561974 ~ 25568686 (-)
G39413 LOC102215562 other downstream 1356868 25281886 ~ 25282286 (-)
LOC122345923 NA other downstream 1880486 24754202 ~ 24758668 (-)
naa38 naa38 other downstream 1890544 24746672 ~ 24748610 (-)
anapc2 anapc2,LOC107559737,LOC107730340,LOC107746468,LOC107683706,LOC107595991,LOC107684355 other downstream 2045038 24587724 ~ 24594116 (-)
LOC122345426 smpx,LOC107705278,LOC107671350,LOC107590224,LOC107663668,LOC107586736,LOC107721880 other upstream 452280 27099815 ~ 27107385 (-)
isca1 isca1,LOC107702919,LOC107662049 other upstream 735386 27382921 ~ 27398741 (-)
LOC122344874 NA other upstream 1238506 27886041 ~ 27895454 (-)
G40080 pappaa,pappa,LOC107556005,LOC107558864,LOC107739977,LOC107675511,LOC107728218 other upstream 1608293 28255828 ~ 28264704 (-)
LOC122345120 LOC107728794,LOC107696375,LOC107590009,LOC107739482 other upstream 2676447 29323982 ~ 29326115 (-)

Expression


Co-expression Network