CI01000004_15456870_15468826


Basic Information

Item Value
gene id CI01000004_15456870_15468826
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 15456503 ~ 15468826 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_15456870_15468826.mRNA
AACGTAAGATGGAAGAAATCGATTATGCGAGAGCCAAGCCCGTGGCAGAAGACTCAAATGCTGATGCCATCAATATTGACGGAAGAGTATATTTACTCCTTTTCTACACAGATGGACGTTATACTGCGCTGCGTGAAGATCTGGAAGCAGATGCTCGGGATTTTGAGGCTCCCACCTGGAGTTTAGCTGTTGACCAGCAATATTTAAAAAACTATTCCAAAGAGGCCATTAAAAGACAGGATGTAATACATGAGCTGATTCAGACAGAAATAAATCACGTGCGGACGCTAAAGCTGGTTTTGGGCGTATACGTGCGAGAACTGCGTGAGAACCTGCAAATGGATGAGACGCGACTGGAAAGACTCTTTCCACAGGTGGAAAACCTGCTCCAGGTGCACCAGCTTTTCCTCGACCGCCTTAAACAGCGAAGAGTCAATTCCATGGAGGCAGGCAGTACCCAGAATTACTGCATCCACAGTATTGGAGACATCCTTATCGCACAGTTCTCAGGTGAAATTAGAGACAGACTGCAGTATTGCTATGGAGTGTTCTGCAGTCACCACACCGATGCAGTCAACTGCTACAAAGACTTGATGCAAAACAAGAAGTTCCAGGCTTTAATACGAAAAATATGTTCGTTGTCCATTATACGGAGATTAGGAATCCCAGAGATTATTCTCCTTATAACGCAGCGCATCACAAAATATCCAGTTCTGTTTGAACGTGTCATTAAATACACTGAAGTCGACTCAGAGGAGCACAAGAGCTTAGTACGAGGTCTGGACTTGCTGAAAGACACCATATCACAAGTGAATAATCACGTGGACGAGTTTGAGAAAGCGGCAAGGCTGAGGGACTTGAGCAGTAAGCTGGAGCCCAAGTCACAGGTCAAGATGACCCACGGGCGAGTGTTTCGCAGAGAGGACATGCTACAGGACAAGAGGATGCTGCTTCACGAGGGCATGCTCAACTGGAGGGTAACTTCTAACAAAAGCAAAGATGTCCTAGTCTTGCTGTTGTCAGATGTTTTGCTGCTGTTACTGGAGAAAGATCAGAGACTTACCTTTGCCTCTCTGGACGGTAAGCCTGCAGTGATTTCACTGCTGAAGCTCATTGTGCGTGAAGCGGCTCATAACGAGAAGACCATGTTTCTGATCTCCGCCGCCTCGGACACTCCAGAGATGTATGAGTTTCACACCTCATCCGGAGAGGAGCGCAACACCTGGAGAGACAAAATCTGGAAGGCCGTGGAACTCTGTCCAGAAGATGAAGAAGAGGAGCCAGAAGAGCTCTCTGAGAGGATCCAGGACTTTCAAAGGAGGCTTTACATTCATGATGCCATGATAGAGCAGAACCTTACAGAAAAGCTGAGGTTATTCACCAGCATTACAGCCTATGTGACAGGTGTTACTGACATCTCTCCAAGTGACCGCCATCTGCTGCGTGGGAATGCATCAGAGCCCCTGCAGGGGGAACAACTCCTCGCCGGAGCCCTGAAAGATGTGGAGAATTTACAAAACTTGCTGGTAACATGTGAGTACGGCCAAACTCCTCCTCCTGGTGAAGGGATGGATCTGGTGCCACTTCCCAAAAGACCTGAAGCTTTCAGAGGCTTTGAGAGTGAAACCTACATGCTATCTGGAAGTGGTATTGAGAGTCTAGTGGAAAGAACGGGAGAAAGATGTCAGTGGTCCAACTCGGACCCTCAGCACAGAGAGCTTTATTCTAATGAGGACCTGGAGCTGTCGGCAGATGAGGAGATGACTCTTCAGAGCTGGAGTGCGTATCTGTCAGTCTTCTTCCCTAAAGCAGAGCTTTATGACATTGCAAATAGATTGTCTCAGAAACTTTACAGCCTTCAGTCCATCGTTCAGCAGCAAGAGAGCCACATCGAGTTGCAGCGCGCCACTATTGAGGAGCTGATGTCACGCCCCCGGGGCAACACTCTCCTGGAGAAGGAAAAGCATCGGAACCTGGAAAAGCAGCGTGAGGAGCTGGTCAACTTCCAGCGGCTCCGGAATCAGCACCGACAGGAGCAGGTGCAGTGGGAGCAGGAAAGAGAAAGGCAGAGGGTGCAGGCAGAGATCAGGGAGAAGGAGCTGAGCGAGAGAGAACTGGAATGCAGCAAACTGGAAGAAAAGCTTGTGGAAGATAAACAGGAACTGGCCAGGGGCAGAATGGTGTACCAAGAGGATCTGGAGCGGCTCCGAGACACTATGCGTGCTTTGGAGAAGGAGAAAGAGCAGTTGCAGAAGAAGTATAAGAAGTATGAGAAGAATGAGAATGTACCCAACACCTTTCCCTTGGAGAATGAACAGATACAGTTACCTCCACCCTACCCCATATTGAATGTGGTTACTCCCGGCTTTGAAGAGAGGCCTCCCCTGGTACCACCACGCAGGGAGAGCATCATTAACCTTCCTCCTAAAACAGAAGTGCCCATCCACCTCATTAGTACCACCAACCAATCCCACAAAGCCGGCTCTGTCCAACAGAAGATCCCCACCAAGCTGGCCGCCCAACCAAAAGGCAAGGAGAAGCACAGCAAGCACAGGAACTCCCATCAGCGCACCAACAGCGCAGCTGGCATAGAGGTGTCTCAGTTACTTCCCATCAAAGTTGCAGTCAAGGAAGGAGGCAGTTTAAGAGCCATGAGATCCAACAGTCCTCACCAACTCCATCCAGATACGTTCATGCCTCCAGAGAGGTTATCCAGCTCTGCGCCCTCTCATTCAGGAAATGGCATCAGGAAGCACAACAACAATCATAACACACAGAGTAGCCAGTCAGGACACCATGAAAGGCTCTTTTACATTGTTTTGCTTCTGTCAACTGGAAAAAGTTATATTTGAGCAAATATTTTAGTGTTTTAGAAAAAAATAGCCTCGTTTTTCTTTATGACTGGGGATATATGCTCTTCACTACTAAATGTCAGAGGTACCACTTATGTCTTTTTAGTTTTGGTCTTATTCATTTATACTGTAAGTAGCTAGACCACGGCACAATTCTGTTGGATCATTATTTTATGTTGATTTTATTCTGAGAAAATACAGACTCTTAATTAGAAACCGTACATTGTAAATACAGCTTTTTTGTCCTCGCAAAGAGAAACTGTTGCACTTTTAAGTGCTTGCCATCGGCTCAGTAAAATGAACAAACATAAAACCCGTGTTCAGTTTTTCTTCACATTGTTTGTCCATCGATTTTCTTTTGAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_15456870_15468826.mRNA True 3219 mRNA 0.47 19 15456503 15468826

Neighbor

gene id symbol gene type direction distance location
CI01000004_15434959_15441538 DAPK3 coding downstream 14965 15434879 ~ 15441538 (-)
CI01000004_15429682_15430354 NA coding downstream 25454 15428518 ~ 15431049 (-)
CI01000004_15416876_15425066 NA coding downstream 31339 15416876 ~ 15425164 (-)
CI01000004_15370117_15389832 PRKCI coding downstream 66671 15369754 ~ 15389832 (-)
CI01000004_15326982_15360355 SKILA coding downstream 96148 15326859 ~ 15360355 (-)
CI01000004_15483948_15538159 INSR, INSRA coding upstream 15122 15483948 ~ 15538159 (-)
CI01000004_15561061_15573201 HIAT1A, MFSD14A coding upstream 91083 15559909 ~ 15573201 (-)
CI01000004_15581505_15586825 NA coding upstream 112564 15581390 ~ 15586825 (-)
CI01000004_15653837_15673610 NFATC4 coding upstream 184899 15653725 ~ 15673610 (-)
CI01000004_15702447_15708692 METTL17 coding upstream 233545 15702371 ~ 15708692 (-)
G34734 NA non-coding downstream 57726 15398571 ~ 15398777 (-)
G34733 NA non-coding downstream 58495 15397806 ~ 15398008 (-)
G34634 NA non-coding downstream 138281 15316241 ~ 15318222 (-)
G34611 NA non-coding downstream 163838 15286323 ~ 15292665 (-)
G34717 NA non-coding downstream 176361 15279943 ~ 15280142 (-)
G34768 NA non-coding upstream 207746 15676572 ~ 15682517 (-)
G34613 NA non-coding upstream 224264 15693090 ~ 15694289 (-)
G34595 NA non-coding upstream 228179 15697005 ~ 15700776 (-)
G34640 NA non-coding upstream 279823 15748649 ~ 15748929 (-)
G34608 NA non-coding upstream 294416 15763242 ~ 15765773 (-)
G34718 NA other downstream 174854 15281016 ~ 15281649 (-)
CI01000004_15086759_15087492 NA other downstream 366145 15086671 ~ 15087575 (-)
G34668 NA other downstream 403728 15051176 ~ 15052775 (-)
G34632 NA other downstream 431282 15011361 ~ 15025221 (-)
CI01000004_14827536_14831360 NA other downstream 628380 14827496 ~ 14831526 (-)
G34633 NA other upstream 318560 15787386 ~ 15787897 (-)
CI01000004_15832789_15836192 NA other upstream 363747 15832573 ~ 15836231 (-)
G34796 NA other upstream 391787 15860613 ~ 15863748 (-)
G34934 NA other upstream 932919 16401745 ~ 16421506 (-)
G34982 NA other upstream 1033899 16502725 ~ 16515974 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location