zgc:153704 (zgc:153704,LOC107591480,LOC107562205,LOC107725160,LOC107665866,LOC107654290)


Basic Information

Item Value
gene id zgc:153704
gene name zgc:153704,LOC107591480,LOC107562205,LOC107725160,LOC107665866,LOC107654290
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 31733458 ~ 31735951 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238572.1
TTCCCACACTCCCAGACCGAGCTCTGCAGTAGCCATGGCAACCGCCCTGCTGGGATTGCTGGGAGTTTTGCTCTGCGCCCTTGCCGTCAGTTCTGAGGTCACACCGCAGGCCGACTTCGACCTCAAGGGGGTGTCTGGGAAATGGTATCTGATTGGTTTTGCCACCAACGCCGAGTGGTTTGTCGCCCGTaaagcaaacatgaaaatgGGCATCGCCGTGCTGACGCCGACCGACGAAGGAGATCTGGAGATGGCATATTCAAGTCTCAATCCCGATGGCACATGCTGGAGAATGAACCATCTGGCTCAAAAGACGGATATTCCTGGGAAATTCAGCTTCCGCAGTGAACGCTGGGAGACTGACAACGACATGCGTGTCGTCGATGTGAAGTACGATGAATACGCTTTGATCCACACCATCAAGACCAAAGCCGACTCCACCGTGCTCCTCAACAAACTCTACGGCCGAACCCCAGACCTGAGCCAGGACGTCGTGTACAAGTTCACCGAGTTTTCACTGGAGCAAGGCATTCTGCCCGAGAACATCGCCATCCTGCCTAAAAATGACGAGTGCCCTTGACGTGCTGACGTGAAGCCCCTCCTGAATCCTGACTGATTTATTACGACTGTAGTGCCTTTAGTGTTTTCTGCTCTCTTTCCTGATC

Function

symbol description
zgc:153704 Predicted to enable small molecule binding activity. Orthologous to human LCN15 (lipocalin 15).

NR:

description
PREDICTED: lipocalin isoform X1

GO:

id name namespace
GO:0006629 lipid metabolic process biological_process
GO:0006810 transport biological_process
GO:0005576 extracellular region cellular_component
GO:0036094 small molecule binding molecular_function
GO:0005215 transporter activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238572.1 True 665 mRNA 0.54 6 31733458 31735951

Neighbor

gene id symbol gene type direction distance location
srrt srrt,LOC107665251,LOC107591506,LOC107725089,LOC107734366 coding downstream 49878 31674315 ~ 31683580 (-)
LOC122345089 NA coding downstream 61850 31668017 ~ 31671608 (-)
si:ch211-283g2.2 NA coding downstream 65843 31661478 ~ 31667615 (-)
si:ch211-283g2.1 si:ch211-283g2.1,LOC107734371,LOC107591505,LOC107654320,LOC107562197,LOC107667012,LOC108437645 coding downstream 73796 31651505 ~ 31659662 (-)
LOC122344717 LOC107664759,LOC107725124,LOC107654315,LOC107734362,LOC107562201 coding downstream 119628 31600225 ~ 31613830 (-)
LOC122345662 ralgps1,LOC107666038,LOC107557582,LOC107725136,LOC107654291 coding upstream 23985 31759936 ~ 31857602 (-)
zbtb43 zbtb43,LOC107715540,LOC107668077,LOC107725105,LOC107654302 coding upstream 123945 31859896 ~ 31864890 (-)
lmx1ba lmx1b,lmx1ba,LOC107591520,LOC107668223,LOC107725103,LOC107654328,LOC107557569,LOC105902565 coding upstream 159852 31895803 ~ 31934473 (-)
mvb12ba mvb12ba,mvb12b,LOC107591487,LOC107666228,LOC107654329,LOC107725155,LOC107557586 coding upstream 207904 31943855 ~ 31960848 (-)
pbx3a pbx3a,LOC107668307,LOC107591489,LOC107725095,LOC107654303,LOC107715538,LOC107550583 coding upstream 243936 31979887 ~ 32016468 (-)
G41037 NA non-coding downstream 1199 31712351 ~ 31732259 (-)
G41023 NA non-coding downstream 31640 31655583 ~ 31701818 (-)
G41018 LOC107734365 non-coding downstream 37670 31691866 ~ 31695788 (-)
G41019 prdx4,LOC107665442,LOC107591478,LOC107734341,LOC107654298 non-coding downstream 48622 31683968 ~ 31684836 (-)
G41034 NA non-coding downstream 84846 31646858 ~ 31648612 (-)
G41051 NA non-coding upstream 61758 31797709 ~ 31798268 (-)
G41064 NA non-coding upstream 239985 31975936 ~ 31977051 (-)
G41065 NA non-coding upstream 241763 31977714 ~ 31978466 (-)
G41177 NA non-coding upstream 650176 32386127 ~ 32386472 (-)
G41198 NA non-coding upstream 702668 32438619 ~ 32439145 (-)
G41035 LOC107734367,LOC107665727,LOC107725151,LOC107591476,LOC107654325,LOC563292 other downstream 10552 31721270 ~ 31722906 (-)
apooa apoo other downstream 21721 31702453 ~ 31711737 (-)
LOC122344987 LOC107591496,LOC107663763,LOC107725109,LOC107734348,LOC107563429,LOC107654309 other downstream 383009 31331349 ~ 31350449 (-)
G40752 hspa5,LOC107686379,LOC107743071,LOC107687227,LOC107567952,LOC107734417,LOC107734415,LOC107686377 other downstream 907100 30817732 ~ 30826358 (-)
G40713 lzts3,LOC107567954,LOC107687254,LOC107574519,LOC795227,LOC107665914 other downstream 940739 30789633 ~ 30792719 (-)
tnca zmp:0000000846,LOC107715542,LOC107557573,LOC107591511,LOC102306937,LOC107725145 other upstream 377945 32113896 ~ 32174064 (-)
LOC122346090 LOC107704013,LOC107725152,LOC107748063,LOC107654332,LOC107557589,LOC107594564 other upstream 478080 32214031 ~ 32293782 (-)
LOC122346085 LOC107748069,LOC107679343,LOC107594586 other upstream 547586 32283537 ~ 32314631 (-)
LOC122345737 egflam,LOC107704151,LOC107667876,LOC107725173,LOC107725080,LOC107564362 other upstream 1002466 32738417 ~ 32757869 (-)

Expression


Co-expression Network