LOC122344933


Basic Information

Item Value
gene id LOC122344933
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 6828115 ~ 6830827 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238584.1
cacacacacaccagaagaGTGATCAGACATCCACATCAACACAACTCATCTCATCTCAACTCAACCAGTTCAgGTCAAATCCAAAACACATCACACAATGCAAAACAATGAAGTCATCTCAACAGATAAGGCGACAGTTATCATTCAGATAAACCCACAGGCAGATGGGTCTGTGATTGTTGATGGACAGCAGGCCAGAGGAGGAGCTCTTAAAGGATTTTTCAAAGCACAGCCAAAGGCACTGGGGACTGTTCAGATAATGACTGGAGTGACGGTCTTCTTACTTGGTATTGTACTCGCCGTAAATTTCCGAAGATATTATGATATTTCTGTCATTAGCGGCATCACCTTCTGGGGATCTTTCATTCACATCAGTGCTGGATCTCTGTCTGTTGCAGCACAGAATAAACTTAATCCATGTGTGGTGAAAGCCTCTCTTGGAATGAATGTGATCGGTACCATAACAGCAGGGATATCCATTCTTCTGATGGGCGCAAACATAGGAATCAATAATATAGTTTGCTACTATAAATATGACTGTGCATTTGTAAAGgaTTATAGATTTGGGATCCTTGGAATATTGCTGGTGTTCTCCATCCTTCAGTTTATCATCTCCATCTTTATCTCAGCATTTGCCTGCAAAGCCACCTGCAACACAGACTCTACAGTGGTCAATGTGGCACTAAACCGGGGATACTGAGTCACGATAAGGATAAGGATGCCATCCAAAGGTTGCCAGGAATTAAAAATTGTAGTGTTGCTTCCgactcaaatatttttttcctttagagTGAAAATATATGagcacattttataattattggAAAATTGATCTTCAAACACATATGTACAAGCTAATTAATCAAGCTAGCCTTAAGGATttctaaaaaaaccaaaaaaaaacattactttttaaagcataacATGACTGGGCTGATATAtgagtgttttaaataaaggtcaCCACTTCTAAAAAAA

Function

GO: NA

KEGG:

id description
K22190 MS4A3S; membrane-spanning 4-domains subfamily A member 3/4/8/12/15/18

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238584.1 True 978 mRNA 0.39 7 6828115 6830827

Neighbor

gene id symbol gene type direction distance location
ttll11 ttll11,LOC107700937,LOC107596909,LOC100002237,LOC107693816 coding downstream 36089 6763136 ~ 6792026 (-)
lamc3 lamc3,LOC107596886,LOC107718641,LOC107700933,LOC107757520,LOC107570860 coding downstream 484500 6282774 ~ 6343615 (-)
aif1l aif1l,LOC107718642,LOC107570864,LOC107757519,LOC107596876 coding downstream 546720 6265737 ~ 6281395 (-)
gfm2 gfm2 coding downstream 564813 6255418 ~ 6263302 (-)
enc1 enc1,LOC107655934,LOC107757521,LOC107570861,LOC107700930,LOC107596864 coding downstream 584297 6232266 ~ 6243818 (-)
LOC122345679 NA coding upstream 5056 6835883 ~ 6839683 (-)
LOC122345680 LOC107710746 coding upstream 9891 6840718 ~ 6842727 (-)
ptges ptges,LOC107710751,LOC107693847,LOC107598231,LOC107691017,LOC107726289,LOC107587481 coding upstream 87038 6917865 ~ 6921619 (-)
med22 med22,LOC107710756,LOC107691021,LOC107596962,LOC107726295,LOC107693846,LOC107587409 coding upstream 114687 6945514 ~ 6949315 (-)
LOC122345529 surf1,LOC107726301,LOC107693844,LOC107587407,LOC107725413 coding upstream 121583 6952410 ~ 6954782 (-)
G33683 LOC107588773 non-coding downstream 215060 6611740 ~ 6613055 (-)
G33681 NA non-coding downstream 216623 6609449 ~ 6611492 (-)
G33615 NA non-coding downstream 649444 6178172 ~ 6178671 (-)
G33612 NA non-coding downstream 654002 6173847 ~ 6174113 (-)
G33610 NA non-coding downstream 655703 6172144 ~ 6172412 (-)
G33768 NA non-coding upstream 5132 6835959 ~ 6858383 (-)
G33791 rpl7a,LOC100194725 non-coding upstream 118717 6949544 ~ 6952310 (-)
G33802 ccbl1,LOC107691018,LOC107731000,LOC107587404,LOC107596979,LOC107726298 non-coding upstream 129448 6960275 ~ 6961261 (-)
G33803 NA non-coding upstream 133128 6963955 ~ 6964175 (-)
G33804 NA non-coding upstream 133433 6964260 ~ 6964511 (-)
G33758 LOC107596916,LOC107710760,LOC107700938,LOC107587412,LOC107693817 other downstream 1933 6824171 ~ 6826182 (-)
G33175 NA other downstream 2205057 4622490 ~ 4623058 (-)
LOC122346168 srrm4,LOC107720865,LOC107702227,LOC107561260,LOC107656798 other downstream 2635034 4144856 ~ 4193081 (-)
piwil2 piwil2,LOC107560971,LOC107707823,LOC107702219 other downstream 2929537 3878650 ~ 3898578 (-)
coq5 coq5,LOC107560969,LOC107707852,LOC107656810,LOC107561264,LOC107702223,LOC107707851,LOC107560965,LOC101158254,LOC107755815,LOC107561265 other downstream 3075351 3744675 ~ 3752764 (-)
usp20 usp20,LOC107691016,LOC107693839,LOC107710745 other upstream 92019 6922846 ~ 6943203 (-)
G33998 LOC108444092 other upstream 551519 7382346 ~ 7397153 (-)
LOC122345606 LOC107712378 other upstream 876143 7706970 ~ 7711824 (-)
si:dkey-220k22.3 NA other upstream 887738 7718565 ~ 7721758 (-)
si:ch211-117m20.4 si:ch211-117m20.4,LOC107663429,LOC107597540,LOC107717881,LOC107677428,LOC107677427 other upstream 1330050 8160877 ~ 8164026 (-)

Expression


Co-expression Network